mRNA_D-mesarthrocarpus_Contig9990.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9990.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9990.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: D7FW08_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW08_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 3.780e-65
Identity = 102/106 (96.23%), Postives = 105/106 (99.06%), Query Frame = 1
Query:    1 LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            +A RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVK+DSHITLAFAGLTADARVLVDKAR+ECQSYRLTCEDAPSI
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSI 106          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A6S9E6K7_HETAK (Proteasome subunit alpha type n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E6K7_HETAK)

HSP 1 Score: 182 bits (462), Expect = 9.250e-56
Identity = 86/102 (84.31%), Postives = 99/102 (97.06%), Query Frame = 1
Query:   13 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            YDRAITVFSPDGHLFQVEYA+EAVKRGSSVV ++GKDCV+LGVER++TAKLQD RT+RKI K+D+H+TLAFAGLTADARVLV+KAR+ECQSYRLTCEDAPS+
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVKRGSSVVGIRGKDCVILGVERKSTAKLQDSRTVRKICKVDNHLTLAFAGLTADARVLVNKARLECQSYRLTCEDAPSV 104          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A835Z7L7_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L7_9STRA)

HSP 1 Score: 180 bits (456), Expect = 8.430e-55
Identity = 89/106 (83.96%), Postives = 99/106 (93.40%), Query Frame = 1
Query:    1 LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            +A  YDRAITVFSPDGHLFQVEYAIEAVKRGSSVV V+  D +V+GVERRATAKLQDPRTIRKIVK+D+H+TLAFAGLTADARVL+DKAR+E QSYRLTCEDAPS+
Sbjct:    1 MAASYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVGVRAADMLVVGVERRATAKLQDPRTIRKIVKVDAHLTLAFAGLTADARVLIDKARLEAQSYRLTCEDAPSL 106          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: W7TRL4_9STRA (Proteasome subunit alpha type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.190e-54
Identity = 88/106 (83.02%), Postives = 98/106 (92.45%), Query Frame = 1
Query:    1 LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            +A RYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK  V+LGVERRATAKLQDPRTI+KI K+D H+TLAFAGLTADARVLV+KAR+ECQSYRLT EDAP++
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTV 106          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A7S2EX89_TRICV (Proteasome subunit alpha type n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX89_TRICV)

HSP 1 Score: 176 bits (447), Expect = 2.240e-53
Identity = 87/102 (85.29%), Postives = 94/102 (92.16%), Query Frame = 1
Query:   13 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D   TLAFAGLTADARVLV+KARVECQSYRLTCEDAPS+
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLVNKARVECQSYRLTCEDAPSV 104          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A024TP35_9STRA (Proteasome subunit alpha type n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TP35_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.160e-52
Identity = 86/106 (81.13%), Postives = 96/106 (90.57%), Query Frame = 1
Query:    1 LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            +A RYDRAITVFSPDGHLFQVEYA+EAVKRG+ VV V+G D VVL VER+ TAKLQDPRT+RKI K+D HITLAFAGLTADARVLV+KAR+ECQSYRLT EDAPS+
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKRGAVVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLVNKARLECQSYRLTVEDAPSV 106          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A3R6Z883_9STRA (Proteasome subunit alpha type n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6Z883_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.430e-51
Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 1
Query:   10 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            RYDRAITVFSPDGHLFQVEYA+EAVKRG+ VV V+G D VVL VER+ TAKLQDPRT+RKI K+D HITLAFAGLTADARVLV+KAR+ECQSYRLT EDAPS+
Sbjct:    8 RYDRAITVFSPDGHLFQVEYAMEAVKRGAVVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLVNKARLECQSYRLTVEDAPSV 110          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A6U2BRH1_9STRA (Proteasome subunit alpha type n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U2BRH1_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.550e-51
Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 1
Query:   13 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D   TLAFAGLTADARVL++K RVE QSYRLTCEDAPS+
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLINKTRVEAQSYRLTCEDAPSV 104          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A1V9Z2W8_9STRA (Proteasome subunit alpha type n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z2W8_9STRA)

HSP 1 Score: 170 bits (431), Expect = 5.120e-51
Identity = 83/103 (80.58%), Postives = 94/103 (91.26%), Query Frame = 1
Query:   10 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            RYDRAITVFSPDGHLFQVEYA+EAVK+G+ VV V+G D VVL VER+ TAKLQDPRT+RKI K+D HITLAFAGLTADARVL++KAR+ECQSYRLT EDAPS+
Sbjct:    9 RYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSV 111          
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A7R9UBV5_9STRA (Proteasome subunit alpha type n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBV5_9STRA)

HSP 1 Score: 171 bits (433), Expect = 5.310e-51
Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 1
Query:   10 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318
            RYDRAITVFSPDGHLFQVEYAI AVK GS+VV V+G D VVLGVERRATAKL++ RTIRK+V+LD HIT AFAGLTADARVL  KAR+ECQSYRLTC+DAPS+
Sbjct:   21 RYDRAITVFSPDGHLFQVEYAINAVKAGSAVVGVRGTDVVVLGVERRATAKLRETRTIRKVVQLDDHITAAFAGLTADARVLTTKARIECQSYRLTCDDAPSV 123          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW08_ECTSI3.780e-6596.23Proteasome subunit alpha type n=2 Tax=Ectocarpus T... [more]
A0A6S9E6K7_HETAK9.250e-5684.31Proteasome subunit alpha type n=2 Tax=Heterosigma ... [more]
A0A835Z7L7_9STRA8.430e-5583.96Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
W7TRL4_9STRA1.190e-5483.02Proteasome subunit alpha type n=2 Tax=Monodopsidac... [more]
A0A7S2EX89_TRICV2.240e-5385.29Proteasome subunit alpha type n=1 Tax=Trieres chin... [more]
A0A024TP35_9STRA2.160e-5281.13Proteasome subunit alpha type n=4 Tax=Aphanomyces ... [more]
A0A3R6Z883_9STRA1.430e-5182.52Proteasome subunit alpha type n=3 Tax=Aphanomyces ... [more]
A0A6U2BRH1_9STRA2.550e-5182.35Proteasome subunit alpha type n=3 Tax=Odontellacea... [more]
A0A1V9Z2W8_9STRA5.120e-5180.58Proteasome subunit alpha type n=5 Tax=Saprolegniac... [more]
A0A7R9UBV5_9STRA5.310e-5181.55Proteasome subunit alpha type n=1 Tax=Pinguiococcu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9990contigD-mesarthrocarpus_Contig9990:2000..4497 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FW08
Preferred namePSMA7
PFAMsProteasome,Proteasome_A_N
Model size339
Max annot lvl2759|Eukaryota
KEGG koko:K01191,ko:K02731
KEGG Pathwayko00511,ko03050,map00511,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005819,GO:0005829,GO:0005839,GO:0005840,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009524,GO:0009536,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0022626,GO:0030071,GO:0030163,GO:0031090,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034515,GO:0036211,GO:0042175,GO:0042802,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044464,GO:0045202,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0090068,GO:0098588,GO:0098794,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990111,GO:1990904,GO:2001252
Exons3
Evalue6.2e-66
EggNOG OGsCOG0638@1|root,KOG0183@2759|Eukaryota
EC3.2.1.24,3.4.25.1
Descriptionthreonine-type endopeptidase activity
Cds size339
COG categoryO
CAZyGH38
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791148.2896383-CDS-D-mesarthrocarpus_Contig9990:1999..20891680791148.2896383-CDS-D-mesarthrocarpus_Contig9990:1999..2089Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9990 2000..2089 +
1680791148.3053737-CDS-D-mesarthrocarpus_Contig9990:3075..32341680791148.3053737-CDS-D-mesarthrocarpus_Contig9990:3075..3234Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9990 3076..3234 +
1680791148.318179-CDS-D-mesarthrocarpus_Contig9990:4407..44971680791148.318179-CDS-D-mesarthrocarpus_Contig9990:4407..4497Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9990 4408..4497 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9990.1.1prot_D-mesarthrocarpus_Contig9990.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9990 2000..4497 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9990.1.1

>prot_D-mesarthrocarpus_Contig9990.1.1 ID=prot_D-mesarthrocarpus_Contig9990.1.1|Name=mRNA_D-mesarthrocarpus_Contig9990.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=113bp
LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERR
ATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTC
EDAPSIGAKTHP*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9990:2000..4497+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9990.1.1 ID=mRNA_D-mesarthrocarpus_Contig9990.1.1|Name=mRNA_D-mesarthrocarpus_Contig9990.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2498bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9990:2000..4497+ (Discosporangium mesarthrocarpum MT17_79)
CTTGCACACAGGTATGATCGTGCGATCACTGTCTTCTCACCCGATGGCCA CCTCTTCCAGGTGGAATACGCCATCGAGGCAGTCAAGAGGGTGAGTCTTC CGCTATTTTTCCCGTGAAAGAGTGATGTCACACTTTCTTTCAGTGTGTAT AGTGTCAGAGATTGATAAGGTCGTCAATAGACTCGTGGGAAGTTCCTAAT GCCACACGAAGGTGGTCGTACAATCCTGTCGGTAAACCTCCACTCACCGT TGGCTTAAGACCGGGTCAAACCTGGCCGGAACTGTGGGCAACCCTACTAG TCTTGCTCGGCAAGGAAAAACACGCTGATGGCCCATGCAAGCTAGACCTG TTCTGTGGCTTTGCCGCATCACTTCAATTCCCTATTCTTATGCGTCCTTG AGCTAGATGGCCTGTTGAATGCCCCTTTCTTTGTGCAGTAAATGTGAAGT CCACAGCATATAGCCACCTTCAATTCCACGTCAGATGTGGAAGGTGTGGT TGGGAGCTCTTAATCTGCTTCTGCAATATTATTCACCCCAAGGGCCAAAG TGAACCTTGTGCTTCCCAGCACTATGACGCTGTGTTCTACCTGCGGTGAC TCGAACGACAGCTTGACTCAGTTTAGTTCGTGTTCGGCACGTTTTCTGTG ACCGCCACCTCCTGTAGCTGTCATCTGCTGTCTTCTCCTGTAACTGCCAT CCCCTGTAACTGCATCCTCAATTCCTGGACTCCTCAAACAATCTGATTGG CTACTAAGTATCAAGAGGTTGGACACACTCACTCATCTTTCGAAAGCCCG AAGCTCGATCCCTTCGGTTAGGGTTATGGTTATGGTTATGGTTATGGTTA TGGTTATGGTTATGGTTATGGTTATGGTTATGGTTATGGTTATGGTTAGG GTTATGGTTTACGCATGCGACGAACCCCTTTCGTGCGGTGTTTTCAAAAA GGGAAACCGCTCTCGTCAACGTTGTCGTCTTCTTTTTTTTTTGGGTGTGT GCTTTTCTTGTGGTCTCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTAA CCCTAACCCTAACCCTTGGGCAAAAGGGCTCGTCGGTGGTCTGTGTGAAG GGGAAGGACTGCGTTGTGCTGGGGGTGGAGAGGAGGGCCACGGCGAAGCT TCAGGACCCAAGGACCATCCGTAAGATCGTGAAGCTGGACAGTCACATAA CCTTGGCCTTTGCTGGTCTCACGGCGGATGCCAGGGTGCGTTTCTGCTTG CTACTAGGTGGTCACCTCACCCTTTTTCCCCCTCCCTCCCTGACCCCATA ACCCTCCCCCTCTCCCCCCCCTCTCCCCCCTCTCTCCCCCCTCTCCCCTA GCCCTTGAGAAAGCGGTGCAGAGGGCTAGGGTTAGGGTTAGGGTTAGGGT TAGGGTTAGGGTTAGGGTTAGGAGTCCCTTTGGTGGTGGTCTCCATCGCT TCGCCTTTATCATTAGGAAACCCCCGCGATACACTAAACCAACCCTAACC CTAACCCTATGCCCCAGTATTAGGAATTTGAACTGTTGATTGAATAGTAG AAAATGACATTGCTCTTGTTAGGTGGTTAGAGGCACAGGTTAGGGCTAAT GTTGGGGCTAGTGTTAGGGCTAGCGGTAGGGCTAGTGTTTGGGCTAGTGT CAGGGTGAGGGCAAGGGTTGTGGATAGGGTTTGAGCTTAGAGCTAAGGTA TATGGGAGGCATTGCTTCACGGTAGGACTTGCACAAGACCAGTGTTAGGG TTTTTGGTTTTTGCTTCTTTCTGCTATACTCCATGACATTGAATAACATT TTAAATATCAATAAGACACTACGCTGGTGCATAACTGCATTATGTAGTAT GACAACTTTAAGGTACAGCATACTTTGAAGTATTCACATCCTTTGTTGAA GCATACCTGTGTTGTGTAGTGTAAACAATCTTTGAAGTGTAACCCTAACC CATCTATCCCTCCTTGGTTGAGTTGTGGAGTGGTGTCAGTACCAATCGCC AGAGGGAAATCCTTCCCTAACCCTAACCTCAACCCTAACCCTAACCCTAA CCCTAACCTTGGTGCCATGTCCATCATGTGCACCTCAGGCCTCTCACAGA GTATCTACGTATATTGTTCTTGTGTTTGCAGATGTATGTACACATGGGCA ACGAAATACTGACAAACCTGGTACTATGGTTATGATACTTGCAATCCTCC ACTTGATGCTCTTTGGTACTACATGTGAAGTACTGGGAAAAGAATATTTT AGAAGACTTGAAGGTGTCGATCTGGTTGCTGAGCTTGAAAAAAGCTTGCA ACATGTAGGTGGATGGATGAAACAGGAGTCATGATGTAACATGACTTCAT GACCCCATGTTGAGGTGCCTTACGCAATAACGTGTACCTTTGGCTGTACC TTTGGCAGGTGCTGGTGGACAAGGCACGGGTGGAGTGCCAAAGCTACCGC CTCACCTGTGAGGACGCACCATCCATTGGTGCGAAGACCCATCCCTAA
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9990:2000..4497+

>mRNA_D-mesarthrocarpus_Contig9990.1.1 ID=mRNA_D-mesarthrocarpus_Contig9990.1.1|Name=mRNA_D-mesarthrocarpus_Contig9990.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=339bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9990:2000..4497+ (Discosporangium mesarthrocarpum MT17_79)
CTTGCACACAGGTATGATCGTGCGATCACTGTCTTCTCACCCGATGGCCA
CCTCTTCCAGGTGGAATACGCCATCGAGGCAGTCAAGAGGGGCTCGTCGG
TGGTCTGTGTGAAGGGGAAGGACTGCGTTGTGCTGGGGGTGGAGAGGAGG
GCCACGGCGAAGCTTCAGGACCCAAGGACCATCCGTAAGATCGTGAAGCT
GGACAGTCACATAACCTTGGCCTTTGCTGGTCTCACGGCGGATGCCAGGG
TGCTGGTGGACAAGGCACGGGTGGAGTGCCAAAGCTACCGCCTCACCTGT
GAGGACGCACCATCCATTGGTGCGAAGACCCATCCCTAA
back to top