mRNA_D-mesarthrocarpus_Contig999.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig999.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig999.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: D8LJW0_ECTSI (ARL3, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJW0_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 4.260e-121
Identity = 173/181 (95.58%), Postives = 178/181 (98.34%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQINDGGG 543
            MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHE FKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSAD+RRMDETGVELGQLLEEEKL GIPVLIFANKQDLLSAL++DEISQGLNLHTIRDRTWFIQAASAKTGEGLQ+GMEW+VSQINDG G
Sbjct:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEDFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADRRRMDETGVELGQLLEEEKLAGIPVLIFANKQDLLSALSSDEISQGLNLHTIRDRTWFIQAASAKTGEGLQEGMEWVVSQINDGAG 181
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: A0A835ZEJ4_9STRA (ARL3, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ4_9STRA)

HSP 1 Score: 318 bits (816), Expect = 3.300e-109
Identity = 159/188 (84.57%), Postives = 172/188 (91.49%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQINDGG---GEEKA 555
            MGLLTLLRKLKR+DQEARILVLGLDNAGKTTILKKLSEEDIT IMPTQGFNIKSLMH+ FKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRM+ETG ELGQLLEE+KL  +PVLI+ANKQDL+SA+  DEI++GLNLHTIRDR W IQ  SAKTG+GLQDGMEWIV++IND     GEEKA
Sbjct:    1 MGLLTLLRKLKRTDQEARILVLGLDNAGKTTILKKLSEEDITSIMPTQGFNIKSLMHDEFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMEETGEELGQLLEEDKLSEVPVLIYANKQDLMSAMAPDEITEGLNLHTIRDRPWHIQGCSAKTGDGLQDGMEWIVTKINDASRARGEEKA 188
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: A0A7R9YCL1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCL1_9STRA)

HSP 1 Score: 298 bits (764), Expect = 3.290e-101
Identity = 144/185 (77.84%), Postives = 165/185 (89.19%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQINDGGGEEKA 555
            MGLL LLRKLK +D+EARILVLGLDNAGKTTILKKLS+ED+ HIMPTQGFNIKSLMH  FKLNVWDIGGQKSIRPYWRNYFDQTDAL+YVIDSAD+RR++ETGVELGQLL+E+KL G+PVLIFANKQDL++A + +E++ GLNLH IRDR W +Q  SAKT +GLQ+GMEWIVSQ+N    EE A
Sbjct:    1 MGLLNLLRKLKSTDREARILVLGLDNAGKTTILKKLSDEDVNHIMPTQGFNIKSLMHAEFKLNVWDIGGQKSIRPYWRNYFDQTDALVYVIDSADRRRLEETGVELGQLLQEDKLLGVPVLIFANKQDLINAASDEELTDGLNLHVIRDREWTVQPCSAKTADGLQEGMEWIVSQMNKAEEEEMA 185
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: A0A7S0LYW6_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LYW6_9CRYP)

HSP 1 Score: 293 bits (750), Expect = 3.390e-99
Identity = 139/176 (78.98%), Postives = 161/176 (91.48%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQI 528
            MGLLTLLRKLKR+D+EARILVLGLDNAGKTT LK+L++EDITH MPTQGFNIKS++HEGFKLNVWDIGGQKSIRPYWRNYFDQTDA++YVID AD+RR+DETGVEL  LLEEEKL G+PVLIFANK+DL++A++ DE+++ L+LH IRDRTW IQ  SAKT EGLQDGMEW+V  I
Sbjct:    7 MGLLTLLRKLKRTDKEARILVLGLDNAGKTTALKRLADEDITHTMPTQGFNIKSVVHEGFKLNVWDIGGQKSIRPYWRNYFDQTDAMVYVIDCADRRRIDETGVELQALLEEEKLAGVPVLIFANKKDLMNAMSPDELTEVLHLHDIRDRTWHIQHCSAKTSEGLQDGMEWLVKNI 182
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: A0A7S0YMS3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YMS3_9CRYP)

HSP 1 Score: 290 bits (742), Expect = 4.560e-98
Identity = 136/178 (76.40%), Postives = 161/178 (90.45%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQIND 534
            MGLLTLLRKLK++D+EARILVLGLDNAGKTT LKKL++EDIT  MPTQGFNIKS++H+GFKLNVWDIGGQK+IRPYWRNYFDQTDAL+YVID +D+RRMDETGVEL  LLEEE+L G+P+L+FANKQDLL+A+  D++++ LNLH+IRDR W IQ  SAKTGEGLQ GMEW+V  IN+
Sbjct:    1 MGLLTLLRKLKKTDKEARILVLGLDNAGKTTALKKLADEDITTTMPTQGFNIKSVIHDGFKLNVWDIGGQKTIRPYWRNYFDQTDALVYVIDCSDRRRMDETGVELNTLLEEEQLAGVPLLLFANKQDLLNAMAPDDVTEALNLHSIRDRIWHIQPCSAKTGEGLQAGMEWMVGNINN 178
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: A0A7S0MCU9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MCU9_9CRYP)

HSP 1 Score: 288 bits (736), Expect = 3.750e-97
Identity = 139/177 (78.53%), Postives = 158/177 (89.27%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQIN 531
            MGLLTLLRKLKR+D+EARILVLGLDNAGKTTILKKL++EDITH MPTQGFNIKS++HEGFKLNVWDIGGQK+IRPYWRNYFDQTDAL+YVID AD RRMDET VEL QLLEEEKL G+PVLIFANKQDL +A++ D++++ L L T+RDR W IQ  SAKTGEGL DGME +V  I+
Sbjct:    1 MGLLTLLRKLKRTDKEARILVLGLDNAGKTTILKKLADEDITHTMPTQGFNIKSVVHEGFKLNVWDIGGQKTIRPYWRNYFDQTDALVYVIDCADPRRMDETSVELSQLLEEEKLKGVPVLIFANKQDLANAMSPDQVTEALALDTLRDRAWHIQPCSAKTGEGLHDGMEKLVKSIS 177
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: A0A7S1G4R5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4R5_9STRA)

HSP 1 Score: 287 bits (735), Expect = 9.880e-97
Identity = 139/185 (75.14%), Postives = 161/185 (87.03%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQINDGGGEEKA 555
            MGLL+LLRKL R+D+EARILVLGLDNAGKTTILKKLS+EDITHIMPTQGFNIKSLMH+GFKLNVWDIGGQK+IRPYWRNY++ TDALI+VIDSAD+RR++E G EL  L EE+KL G+P L+FANKQDLLSA +A EI++ LNL  +RDR W IQA SAKTGEGLQ+GMEW+V  I     EEK+
Sbjct:   10 MGLLSLLRKLHRTDKEARILVLGLDNAGKTTILKKLSDEDITHIMPTQGFNIKSLMHDGFKLNVWDIGGQKTIRPYWRNYYESTDALIFVIDSADRRRLEEAGNELAALFEEDKLAGVPALVFANKQDLLSAQSASEIAESLNLDGVRDRAWQIQACSAKTGEGLQEGMEWVVKIIQKAEDEEKS 194
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: K3WN62_GLOUD (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=K3WN62_GLOUD)

HSP 1 Score: 287 bits (734), Expect = 9.950e-97
Identity = 138/181 (76.24%), Postives = 160/181 (88.40%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQINDGGG 543
            MGLL LLRKLK+ D EARILVLGLDN GKTTILKKLSEEDI+HIMPTQGFN+KSL  +GFKLN+WDIGGQK+IRPYWRNY++QTDALIYVIDSAD+RR++ETG+EL  LLEEEKL  +P+L+F+NKQDLL+AL + EIS  LNL TIRDRTW IQA SAKTGEGLQ+GMEWIV+ ++   G
Sbjct:    1 MGLLNLLRKLKKDDSEARILVLGLDNGGKTTILKKLSEEDISHIMPTQGFNVKSLQVDGFKLNMWDIGGQKTIRPYWRNYYEQTDALIYVIDSADRRRLEETGMELVTLLEEEKLANVPILVFSNKQDLLNALPSSEISTALNLATIRDRTWHIQACSAKTGEGLQEGMEWIVNTMSSSAG 181
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: L1JN43_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JN43_GUITC)

HSP 1 Score: 286 bits (731), Expect = 2.160e-96
Identity = 136/177 (76.84%), Postives = 157/177 (88.70%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQIN 531
            MGLLTLLRKLK+S++E RILVLGLDNAGKTT LKKL++EDITH MPTQGFNIKS++HEGFKLNVWDIGGQK+IRPYWRNYFDQTDAL++VID +D RRMDETGVEL QLL+EEKL G+P+LIFANKQDL++A+  DE+++ L L  IRDR W IQ  SAKTGEGLQ GMEW+V  IN
Sbjct:    1 MGLLTLLRKLKKSEKEFRILVLGLDNAGKTTALKKLADEDITHTMPTQGFNIKSVIHEGFKLNVWDIGGQKTIRPYWRNYFDQTDALVFVIDCSDHRRMDETGVELNQLLDEEKLAGVPLLIFANKQDLMNAMGPDEVTEVLGLTNIRDRAWHIQPCSAKTGEGLQGGMEWLVKNIN 177
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Match: A0A7S3HPP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPP9_9STRA)

HSP 1 Score: 284 bits (727), Expect = 9.430e-96
Identity = 137/179 (76.54%), Postives = 160/179 (89.39%), Query Frame = 1 
Query:    1 MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGFNIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMDETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDRTWFIQAASAKTGEGLQDGMEWIVSQINDG 537
            MGLLTLLRKLK+SDQEAR+LVLGLDN+GKTTILKKLS+EDI+ IMPTQGFNIKSLMH+GFKLNVWDIGGQKSIRPYWRNY+DQTDALIYVIDSAD+RRM+ETGVEL QLL+EEKL  +P+LI ANKQDL++ALT  EI+  L L+ +R+RTW I   SA+ G GLQ+GMEW++ +IN G
Sbjct:    1 MGLLTLLRKLKKSDQEARLLVLGLDNSGKTTILKKLSDEDISQIMPTQGFNIKSLMHDGFKLNVWDIGGQKSIRPYWRNYYDQTDALIYVIDSADRRRMEETGVELQQLLDEEKLANVPLLIMANKQDLMNALTPGEITAELGLNEMRERTWQILPCSARDGTGLQEGMEWLLGEINSG 179
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig999.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJW0_ECTSI4.260e-12195.58ARL3, ARF-like Ras superfamily GTPase n=2 Tax=Ecto... [more]
A0A835ZEJ4_9STRA3.300e-10984.57ARL3, ARF-like ras superfamily GTPase n=1 Tax=Trib... [more]
A0A7R9YCL1_9STRA3.290e-10177.84Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0LYW6_9CRYP3.390e-9978.98Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S0YMS3_9CRYP4.560e-9876.40Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0MCU9_9CRYP3.750e-9778.53Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1G4R5_9STRA9.880e-9775.14Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
K3WN62_GLOUD9.950e-9776.24Uncharacterized protein n=32 Tax=Oomycota TaxID=47... [more]
L1JN43_GUITC2.160e-9676.84Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S3HPP9_9STRA9.430e-9676.54Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig999contigD-mesarthrocarpus_Contig999:13635..15540 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJW0
Preferred nameARL3
PFAMsArf
Model size558
Max annot lvl2759|Eukaryota
KEGG koko:K07944,ko:K07977,ko:K11278
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000166,GO:0000278,GO:0000281,GO:0000910,GO:0001655,GO:0001763,GO:0001822,GO:0001882,GO:0001883,GO:0002009,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005929,GO:0005930,GO:0006810,GO:0006892,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007264,GO:0007275,GO:0007399,GO:0007424,GO:0008017,GO:0008092,GO:0008150,GO:0009653,GO:0009888,GO:0009987,GO:0010970,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022008,GO:0022402,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030496,GO:0030705,GO:0031090,GO:0031503,GO:0031984,GO:0032391,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032838,GO:0035146,GO:0035147,GO:0035239,GO:0035295,GO:0035556,GO:0035639,GO:0035869,GO:0036064,GO:0036094,GO:0042073,GO:0042461,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0046530,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051301,GO:0051641,GO:0051649,GO:0051716,GO:0060271,GO:0060429,GO:0060446,GO:0060541,GO:0060562,GO:0061138,GO:0061640,GO:0065007,GO:0070925,GO:0071840,GO:0072001,GO:0097014,GO:0097159,GO:0097367,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098791,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901265,GO:1901363,GO:1903047
Exons4
Evalue6.98e-122
EggNOG OGsCOG1100@1|root,KOG0074@2759|Eukaryota
Ec32 ortholog descriptionARL3, ARF-like Ras superfamily GTPase
Ec32 orthologEc-01_009870.1
DescriptionGTP binding
Cds size558
COG categoryKLT
BRITEko00000,ko03036,ko04031
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791148.2106366-CDS-D-mesarthrocarpus_Contig999:13634..137811680791148.2106366-CDS-D-mesarthrocarpus_Contig999:13634..13781Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 13635..13781 -
1680791148.223457-CDS-D-mesarthrocarpus_Contig999:14342..144501680791148.223457-CDS-D-mesarthrocarpus_Contig999:14342..14450Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 14343..14450 -
1680791148.2376118-CDS-D-mesarthrocarpus_Contig999:14931..150901680791148.2376118-CDS-D-mesarthrocarpus_Contig999:14931..15090Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 14932..15090 -
1680791148.25185-CDS-D-mesarthrocarpus_Contig999:15396..155401680791148.25185-CDS-D-mesarthrocarpus_Contig999:15396..15540Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 15397..15540 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig999.7.1prot_D-mesarthrocarpus_Contig999.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig999 13635..15540 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig999.7.1

>prot_D-mesarthrocarpus_Contig999.7.1 ID=prot_D-mesarthrocarpus_Contig999.7.1|Name=mRNA_D-mesarthrocarpus_Contig999.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=186bp
MGLLTLLRKLKRSDQEARILVLGLDNAGKTTILKKLSEEDITHIMPTQGF
NIKSLMHEGFKLNVWDIGGQKSIRPYWRNYFDQTDALIYVIDSADKRRMD
ETGVELGQLLEEEKLGGIPVLIFANKQDLLSALTADEISQGLNLHTIRDR
TWFIQAASAKTGEGLQDGMEWIVSQINDGGGEEKA*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig999:13635..15540-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig999.7.1 ID=mRNA_D-mesarthrocarpus_Contig999.7.1|Name=mRNA_D-mesarthrocarpus_Contig999.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1906bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig999:13635..15540- (Discosporangium mesarthrocarpum MT17_79)
ATGGGGCTCCTTACTCTTCTTCGAAAGCTCAAGAGGAGCGACCAGGAGGC
TCGTATCCTAGTGCTGGGTTTGGATAATGCTGGCAAGACTACAATCCTCA
AGAAGCTTTCCGAGGAGGATATAACCCACATCATGCCCACTCAGGTAACA
ATGGACTTGGAGGCAAAATCACAACTTCCAAACTTCTCTGTAAGAGGATG
CTTGATACATACAACCTCAGCCAAGCGTTTTGCCTCACCCACCCTGGAAG
GTACAACTCAACCCTTTTACTGGTATCGCCAGGACCGCCTCTCCTCACAT
CGAAATTCTGGGACACTTTACCCTATTCTGACACGACCATCCATGAAATG
CTTGCCCTCCAATAGAAGAGAAATTCGCCCCAAGACGCCTTGCAGTCACA
ACTCCACCCGTTATTACATTTTACCAACGTCTCCCTTCTGCTTTATCCAG
GGCTTCAACATCAAGTCCCTCATGCACGAGGGCTTCAAGCTCAACGTGTG
GGATATCGGTGGGCAAAAATCCATTCGCCCCTACTGGCGCAACTACTTCG
ATCAGACTGATGCCCTTATCTATGTCATTGACAGCGCCGATAAGCGAAGG
ATGGACGAGGTGAGCATGGTGGCATAAATTCTTGAAATTTCGGCGCAGAG
TTTCCCTAGGGCTTTCAGAGTGACAGACACACAAGAAGGGGGGGGAGGAA
CATGCCACTGACTGCTTGCACAGCACAGGCCAGTCACACGTTTATGCAGG
CATCGAGCAAGCTGGCTTCACATGAGGCGACTTGAGCAAATATCGCTGGG
ATGATTTTTTTCATCGCCCCTGTCTGGGTCATCACAAGCACTGGCAGTAC
AGTGGGGGCTTGATTGAACATGGGCACCCTTCACCCCCGTACCTTGTCCT
GAGGTTTGTTGGGACACAACCCGGTTGACACATTGTCTGGAGTTAGGCCT
GAGTGCTGTAGAACCCTGCTGCTCTCCTTTCTTCATCCCGCACCCAGCCT
TAAAACCTTCCGGATGTACTTTCGGCTCTTTGCTGCCCTTTAGTCAATGC
TTCTCCAATTCTCTCTGCCTTGGCTGTCCCCCACACACAGACGGGTGTGG
AGCTGGGGCAGCTCCTTGAGGAGGAGAAGTTGGGGGGGATCCCTGTTCTC
ATATTTGCTAACAAGCAGGACCTGCTAAGCGCCCTCACTGCAGACGAGGT
AGGATCTGTTATTTGGCCTGAGAGGGTTGTGCTTGGGCCCGCAACCCCAC
CCCACACACAGGGTTTGGGAGTGGGAGGGGGTTCTGCGGGTCGGGATCAG
ACCAGTGTGGCTTACCGCAAAGTGCGTGAGGGGATAAGCACACATTTATT
GTTAGGGGGCTTCAAGCACATCCACCTGGACTACAGGGACGGGACCTGGA
CTACAGGGACGGGGCAAGAAGCGCTCGGCATTGTAGCCATGAAGTATCCC
TGACACTCCACGCACGTAGCTGGGCAAGGGGATGAGCACGGGGGGGGGGC
AAGACCTGTCAATGCTTCAGAGTGTTTCAGAAGGAGCACTCCGGAAGCGC
AAGAAATGAGACGATCAAAAGAGGTAACCAGAGCCCATCGACACACGGGC
AGGTGCATCAACCCAAAAGAACTCCCGTTGCTCCCCCCCCCCTCCCCCCT
CCCAGCTCCCCCTGAACGAGGAAACCCAGACCGGCACAACACGGCAACTC
ACCTATCCTGCTCTTGAACCCACTCCCAAAACACACGTACATCCACGCGC
AAAAAACAGATATCCCAGGGGCTGAACCTGCACACGATCCGAGACCGCAC
ATGGTTCATACAGGCTGCTTCAGCAAAGACTGGGGAGGGACTGCAAGACG
GCATGGAGTGGATCGTCAGCCAGATAAATGACGGGGGGGGGGAAGAGAAG
GCGTGA
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig999:13635..15540-

>mRNA_D-mesarthrocarpus_Contig999.7.1 ID=mRNA_D-mesarthrocarpus_Contig999.7.1|Name=mRNA_D-mesarthrocarpus_Contig999.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=558bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig999:13635..15540- (Discosporangium mesarthrocarpum MT17_79)
ATGGGGCTCCTTACTCTTCTTCGAAAGCTCAAGAGGAGCGACCAGGAGGC
TCGTATCCTAGTGCTGGGTTTGGATAATGCTGGCAAGACTACAATCCTCA
AGAAGCTTTCCGAGGAGGATATAACCCACATCATGCCCACTCAGGGCTTC
AACATCAAGTCCCTCATGCACGAGGGCTTCAAGCTCAACGTGTGGGATAT
CGGTGGGCAAAAATCCATTCGCCCCTACTGGCGCAACTACTTCGATCAGA
CTGATGCCCTTATCTATGTCATTGACAGCGCCGATAAGCGAAGGATGGAC
GAGACGGGTGTGGAGCTGGGGCAGCTCCTTGAGGAGGAGAAGTTGGGGGG
GATCCCTGTTCTCATATTTGCTAACAAGCAGGACCTGCTAAGCGCCCTCA
CTGCAGACGAGATATCCCAGGGGCTGAACCTGCACACGATCCGAGACCGC
ACATGGTTCATACAGGCTGCTTCAGCAAAGACTGGGGAGGGACTGCAAGA
CGGCATGGAGTGGATCGTCAGCCAGATAAATGACGGGGGGGGGGAAGAGA
AGGCGTGA
back to top