mRNA_D-mesarthrocarpus_Contig999.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig999.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig999.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: D8LF15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF15_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 2.870e-40
Identity = 74/95 (77.89%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 MSEKRRRSSLLQDLVNRRESQDESQTASIDTDPWRLASFGVIDLLKKLVEEKGIDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVEAFGYA 285
            MSEKRRRSSLLQDLVN+R S+ E Q A+ID+DPWRLASFGVIDLLKKLVEE GIDVN +D RG+ PIIWAIRSGHE V  YL+D GAD+E+FGYA
Sbjct:    1 MSEKRRRSSLLQDLVNKRASEGEEQAANIDSDPWRLASFGVIDLLKKLVEEGGIDVNAKDDRGMPPIIWAIRSGHEEVATYLLDKGADMESFGYA 95
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A836CKL3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL3_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.780e-14
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 1 
Query:   13 RRRSSLLQDLVNRRESQDESQTASIDTDPWRLASFGVIDLLKKLVEEKGIDVNDRDSRGVTPIIWA---------------------IRSG-HENVGAYLMDHGADVE 270
            RRRSS+L  +  +R S D S+ A++D+DPWRLASFG++DLLK  +E+KG  V+  D RG+TP++W                      +RSG HE V + L++ GA V+
Sbjct:    3 RRRSSVLDMMKEKRRSADASRVAAVDSDPWRLASFGMVDLLKVQMEKKGAQVDQVDQRGMTPLLWGEFDADNMVDAVCRVWSRMTPPLRSGSHEAVVSLLLERGASVD 110
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A7S2V3X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3X0_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.780e-14
Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 1 
Query:   55 ESQDESQTASIDTDPWRLASFGVIDLLKKLVEEKGIDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVEAFGY 282
            E ++E + A+ID+DP+RLA+FG+IDLLKK   E   ++N  D  G T ++WA R+GH +V  YL+D GAD+E   Y
Sbjct:    7 EVKEEPEAAAIDSDPFRLAAFGIIDLLKKYFGENMEEINQTDKLGCTALVWACRNGHLSVAEYLVDCGADIEHSSY 82
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A7S2D3I5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3I5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 8.330e-12
Identity = 31/59 (52.54%), Postives = 47/59 (79.66%), Query Frame = 1 
Query:   73 QTASIDTDPWRLASFGVIDLLKKLVEEKGIDVNDRDSRGVTPIIWAIRSGHENVGAYLM 249
            + A++D+D  +LA+FG++D+LKKLVEE+G DVN  D +   P+IWAIR+GH++V  YL+
Sbjct:    7 EVATVDSDIHKLAAFGILDILKKLVEEEGADVNSLDDQKCAPLIWAIRNGHKDVTKYLI 65
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A6G0XGK3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGK3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.970e-8
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 1 
Query:   85 IDTDPWRLASFGVIDLLKKLVEE--------KGIDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVE 270
            +DT+P++LA+ G + +LK LVE         K ID+N +D  G TP+IWA R+G+  V  YL+  GAD+E
Sbjct:   17 VDTNPFKLAAVGNLQILKTLVEPSKEGGNQGKTIDINAKDIYGCTPMIWAARNGYYEVFEYLITQGADIE 86
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A485KMR6_9STRA (Aste57867_9427 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMR6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.050e-7
Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 1 
Query:   85 IDTDPWRLASFGVIDLLKKLVEEKG----------IDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVE 270
            +DT+P++LAS G + +LK LV+  G          IDVN +D    TP+IWA R+G+  +  YL+ HGAD+E
Sbjct:   18 VDTNPFKLASVGNLQILKTLVDPSGNKEHEYQGKPIDVNAKDIYACTPMIWAARNGYFELFEYLVGHGADIE 89
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A0W8DMQ0_PHYNI (26S proteasome non-ATPase regulatory subunit 10 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DMQ0_PHYNI)

HSP 1 Score: 58.9 bits (141), Expect = 8.540e-7
Identity = 28/71 (39.44%), Postives = 46/71 (64.79%), Query Frame = 1 
Query:   85 IDTDPWRLASFGVIDLLKKLVEEKG---------IDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVE 270
            +DT+P+++A+ G + LLK LVE +          +++N +D  G TP++WA R+G+  V  YL +HGAD+E
Sbjct:   12 VDTNPFKMAAVGNLQLLKTLVESQENADGKTPAPLNLNAKDPYGCTPLVWAARNGYLEVVDYLAEHGADLE 82
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A6A4FFL1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FFL1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.540e-7
Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 1 
Query:   73 QTASIDTDPWRLASFGVIDLLKKLVEEKG---------IDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVE 270
            +   +DT+P+++A+ G + LLK LVE +          ++VN +D  G TP++WA R+G+  V  YL  HGAD+E
Sbjct:    8 EVPDVDTNPFKMAAVGNLQLLKTLVEPEENAEGKAPVPLNVNTKDPYGCTPLVWAARNGYLEVMDYLAAHGADLE 82
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BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A8J5IUS9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IUS9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.040e-6
Identity = 29/71 (40.85%), Postives = 46/71 (64.79%), Query Frame = 1 
Query:   85 IDTDPWRLASFGVIDLLKKLVEEKG---------IDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVE 270
            +DT+P+++A+ G + LLK LVE +          ++VN +D  G TP++WA R+G+  V  YL +HGAD+E
Sbjct:  197 VDTNPFKMAAVGNLQLLKTLVEPQENAEGKTPAPLNVNAKDPYGCTPLVWAARNGYLEVVDYLAEHGADLE 267
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Match: A0A5D6YE88_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE88_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.160e-6
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 1 
Query:   73 QTASIDTDPWRLASFGVIDLLKKLVEEKG---------IDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVEAFGY 282
            +   IDT+P+++A+ G + LL+ LVE +          ++VN +D  G TP++WA R+G+ +V  YL+ +G DVEA  +
Sbjct:    8 EVPEIDTNPFKMAAVGNLQLLRALVEPEANADGKAPAPLNVNAKDPYGCTPLVWAARNGYVDVLDYLVANGGDVEAVSF 86
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig999.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LF15_ECTSI2.870e-4077.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CKL3_9STRA1.780e-1441.67Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A7S2V3X0_9STRA3.780e-1448.68Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2D3I5_9STRA8.330e-1252.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6G0XGK3_9STRA9.970e-844.29Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KMR6_9STRA1.050e-743.06Aste57867_9427 protein n=1 Tax=Aphanomyces stellat... [more]
A0A0W8DMQ0_PHYNI8.540e-739.4426S proteasome non-ATPase regulatory subunit 10 n=... [more]
A0A6A4FFL1_9STRA8.540e-738.67Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A8J5IUS9_9STRA1.040e-640.85Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A5D6YE88_9STRA1.160e-636.71Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig999contigD-mesarthrocarpus_Contig999:4069..6366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LF15
PFAMsAnk_2,Ank_3,Ank_4,NACHT
Model size741
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue4.7e-41
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Ec32 ortholog descriptionAnkyrin-repeat protein
Ec32 orthologEc-21_006340.1
Descriptionspectrin binding
Cds size741
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791148.121424-CDS-D-mesarthrocarpus_Contig999:4068..42611680791148.121424-CDS-D-mesarthrocarpus_Contig999:4068..4261Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 4069..4261 -
1680791148.1345036-CDS-D-mesarthrocarpus_Contig999:5242..54051680791148.1345036-CDS-D-mesarthrocarpus_Contig999:5242..5405Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 5243..5405 -
1680791148.1460989-CDS-D-mesarthrocarpus_Contig999:5757..59271680791148.1460989-CDS-D-mesarthrocarpus_Contig999:5757..5927Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 5758..5927 -
1680791148.1579595-CDS-D-mesarthrocarpus_Contig999:6034..61741680791148.1579595-CDS-D-mesarthrocarpus_Contig999:6034..6174Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 6035..6174 -
1680791148.1731925-CDS-D-mesarthrocarpus_Contig999:6291..63661680791148.1731925-CDS-D-mesarthrocarpus_Contig999:6291..6366Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 6292..6366 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig999.3.1prot_D-mesarthrocarpus_Contig999.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig999 4069..6366 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig999.3.1

>prot_D-mesarthrocarpus_Contig999.3.1 ID=prot_D-mesarthrocarpus_Contig999.3.1|Name=mRNA_D-mesarthrocarpus_Contig999.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=247bp
MSEKRRRSSLLQDLVNRRESQDESQTASIDTDPWRLASFGVIDLLKKLVE
EKGIDVNDRDSRGVTPIIWAIRSGHENVGAYLMDHGADVEAFGYAGMRAL
HHACNNSHEGSIALLLERGADPNATDEFGNTPLHYAASRGVLNIIVRLLD
KGADPGASNGQGTTPLHKACTFGQSAVVRKFAEVGADVNKADKEGSTPLH
VAARSGFGGLVSILLDLGALTQSVNKAGKTPQGVALDAPVAALLGG*
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mRNA from alignment at D-mesarthrocarpus_Contig999:4069..6366-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig999.3.1 ID=mRNA_D-mesarthrocarpus_Contig999.3.1|Name=mRNA_D-mesarthrocarpus_Contig999.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2298bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig999:4069..6366- (Discosporangium mesarthrocarpum MT17_79)
ATGTCAGAGAAACGAAGAAGATCATCCCTTCTTCAGGATCTTGTGAACAG
GAGGGAATCACAGGACGAATCCCAGGTCAGTGAATCCCGAGAATGGACTG
AGCGGCGAGCGGAAGTCCAGCCCACCTGATGGGAGTAACCCTGTTTCTGA
CCTTCAGGCGTTTCCTCTTCCCTTTTTCTGCCTATTCATTAGACAGCAAG
TATTGATACAGACCCATGGCGCCTAGCAAGCTTTGGAGTCATCGATCTCC
TGAAGAAACTGGTCGAAGAGAAAGGAATCGATGTTAACGATCGAGACAGC
AGAGGCGTCACCCCAATCATCTGGGCGATCAGGTACAGGCATGCAGGTAG
ATCCAACGGGGGATCCGCGACAGCCTGTTTAGGTGGAAGTGTTTAAAGCA
CCTTATGAACTATGAAACACACATCCCTATCAATGGCAGGAGTGGGCACG
AGAATGTTGGGGCGTATTTGATGGACCATGGTGCGGATGTGGAGGCCTTT
GGCTACGCTGGAATGAGAGCATTGCACCACGCGTGCAACAACTCGCATGA
GGGATCGATCGCTCTTCTCTTAGAAAGGGGTGCTGACCCCAATGCGACGG
ACGAATTTGGTGCGTCGAGGATACAATCCAATGGAGAAACCTCAGCAAGC
TGCAAATAATTATTATGTCATTAGGATAGCGAAAGGAGACATTGAGAGCA
GGGAAGGGGTCATTAAAGGTGTAATGGAGAATCCTTGGGACGACTTCGCA
ACACGTTACGACAGAGGGTGCTTCCCCCAAAACGCCTGTTATGCGCAGTT
CCTCTTCTTCCACCCTTGGAACCCTCTGGGCTATGCACAAAAGAATGGCT
CATCACAAGTGCCGTGCACGTGTCCCACTTTATGTATGGGAGCACTCTTT
CCCTCCTCACTGCCTTGCTTGCTTGCAACCTTTTCCGGGGAAAAAAACTG
CTTGTGCCCAGGAAACACCCCGCTGCACTACGCTGCCTCAAGAGGTGTCC
TCAACATCATCGTCCGTCTACTCGACAAGGGTGCAGACCCGGGTGCATCC
AATGGCCAGGGCACGACCCCTTTGCACAAGGCTTGTACGTTCGGGCAAAG
TGCGGTAGTGAGGAAGTTTGCAGAGTGAGTGACTGTTTTGTTGTCATACC
CGTGCCGTGCACACACATACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACAAAACATT
GTATGAACACCAGGCATTGTGCCAACACAAGCACTGTGTTGACAAGCACT
GGGTTAACGCAAGCATCGTGTTGACTAACGCACACGTTGTCTTGCCCTCT
CTGACCTCCCCGAGCTCTGTGTGTTTTTTTTTTTTTCTGGAGGGCTCCCC
GGTGCCACGCTCGCTCTGTTGGAGAGTGACGTGTTTAGCCATCTGAAGAG
CCATTTTGCAGCTGCCCTGGTATGGTCGAGCAGTGCGAAGAAATGAGAAT
TCAATGCATTTGATCACCGAATGCTCGATATCTCAAGGGCTACTCTACCA
CCCAGCTGGACATGGTTGGGGGATGGGTGCATGAAATACACACCCGAACA
GATGACTGGCTGTATTGTGGCCAACACTTGGATCATGCGCACGTATGCGT
TACACACGGCAAAACAGGGTGTCATGTTTCGTCCCACAGCAACAGTGACG
ATTACCACTTCCCGGGATATCCACTGCCACAGCCACCACCCTCACTTCTT
CGCCAGGAACCACAGCTTCCAACCTTGTCAGAAAGTTATGCGTGCTTTGT
GTGGCTTGAAACATTCTGTGTTACTTGTGCATACACATGTATGTATGCAG
ATATGTCTTGTTCTTTTCAGGAATACCCAGTAAGCTCTCCCTTTATGACC
ATATCCCACCATCCACTTTCAGTACAGCACCCCTACGTACTTCCCTCAGA
TCATATCTTGAGCAGCCACCCAGTGAACCCATCCCCAATACCCTACTGCC
TTTACTTCACCCCTGGTCCTCTCTCGGTCCCTTGGCTGTGTACTTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCACCACCTGCACATCACTGCCAC
AACAGGGTGGGGGCAGATGTCAACAAGGCTGACAAGGAAGGGAGCACGCC
CCTGCATGTTGCCGCCAGGAGCGGGTTCGGCGGCCTGGTCTCCATCCTGC
TTGACCTTGGGGCCCTGACCCAGTCAGTGAACAAAGCCGGGAAGACGCCA
CAGGGCGTCGCCCTGGATGCTCCTGTGGCAGCGCTGTTGGGGGGGTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig999:4069..6366-

>mRNA_D-mesarthrocarpus_Contig999.3.1 ID=mRNA_D-mesarthrocarpus_Contig999.3.1|Name=mRNA_D-mesarthrocarpus_Contig999.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=741bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig999:4069..6366- (Discosporangium mesarthrocarpum MT17_79)
ATGTCAGAGAAACGAAGAAGATCATCCCTTCTTCAGGATCTTGTGAACAG
GAGGGAATCACAGGACGAATCCCAGACAGCAAGTATTGATACAGACCCAT
GGCGCCTAGCAAGCTTTGGAGTCATCGATCTCCTGAAGAAACTGGTCGAA
GAGAAAGGAATCGATGTTAACGATCGAGACAGCAGAGGCGTCACCCCAAT
CATCTGGGCGATCAGGAGTGGGCACGAGAATGTTGGGGCGTATTTGATGG
ACCATGGTGCGGATGTGGAGGCCTTTGGCTACGCTGGAATGAGAGCATTG
CACCACGCGTGCAACAACTCGCATGAGGGATCGATCGCTCTTCTCTTAGA
AAGGGGTGCTGACCCCAATGCGACGGACGAATTTGGAAACACCCCGCTGC
ACTACGCTGCCTCAAGAGGTGTCCTCAACATCATCGTCCGTCTACTCGAC
AAGGGTGCAGACCCGGGTGCATCCAATGGCCAGGGCACGACCCCTTTGCA
CAAGGCTTGTACGTTCGGGCAAAGTGCGGTAGTGAGGAAGTTTGCAGAGG
TGGGGGCAGATGTCAACAAGGCTGACAAGGAAGGGAGCACGCCCCTGCAT
GTTGCCGCCAGGAGCGGGTTCGGCGGCCTGGTCTCCATCCTGCTTGACCT
TGGGGCCCTGACCCAGTCAGTGAACAAAGCCGGGAAGACGCCACAGGGCG
TCGCCCTGGATGCTCCTGTGGCAGCGCTGTTGGGGGGGTAG
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