mRNA_D-mesarthrocarpus_Contig999.10.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig999.10.1
Unique NamemRNA_D-mesarthrocarpus_Contig999.10.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig999.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig999contigD-mesarthrocarpus_Contig999:18743..20654 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1913
Hectar predicted targeting categoryother localisation
Exons1
Cds size1896
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791148.074678-UTR-D-mesarthrocarpus_Contig999:18742..187581680791148.074678-UTR-D-mesarthrocarpus_Contig999:18742..18758Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig999 18743..18758 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791148.0856712-CDS-D-mesarthrocarpus_Contig999:18758..206541680791148.0856712-CDS-D-mesarthrocarpus_Contig999:18758..20654Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig999 18759..20654 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig999.10.1prot_D-mesarthrocarpus_Contig999.10.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig999 18759..20654 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig999.10.1

>prot_D-mesarthrocarpus_Contig999.10.1 ID=prot_D-mesarthrocarpus_Contig999.10.1|Name=mRNA_D-mesarthrocarpus_Contig999.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=632bp
MGSPVVAMEKAHGMRVGVGGGSDGRGQAGLVIAGGTMSDTDARKDGVMLE
LSREGTATQVSWENSATADANRPLGSPCTTSSTSRTEYAGPGAEDVNARI
AAVVAEAKAKANAEGLMGVAASTASAARRKQPAPVAPLTKEYASARAVVV
QAKVSPKSVSTTEIKAQAPAMSLARGVKGNDLPPTATQLKASSEGVAGRQ
QEAPHQGRAPGLTTSIDQKQGRESPEKTRGRGAAASPPARAQDGSAQAPA
QAGALQAGSQARLGAVALGTTVALPVALSTMAVAVGKPKPVLVEAGQAKA
GAPLANVKPRSTQLSPHLSAATAATMRVVRKVKATPRGETMAAASPVAAS
RQSLPAPSPPEALRAGEGAGKGVGVMVTPGRLLRPQGKSGARPPAAATSL
SAHPDTEAFAPAPYSGGVAAATSALAVMPINLAPSTCASAADTAKEAPAK
TAAAALLAATAVSSSLVVRWPTRRRGPGQRRPWPYGFGGPYFTLKTKDPA
GQPRRFDPGRNTSYAGVIPPMEVLLEGLVRPMPLPTLPPKINSTGPGQAS
RQGGSSVGPGDGGGGVGGGAPLATGTVSIAVSPTASAAAIPADGKCSRDT
GGPGKASKGDVKVQVQSSSSSRGGSGSGSGVG
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mRNA from alignment at D-mesarthrocarpus_Contig999:18743..20654+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig999.10.1 ID=mRNA_D-mesarthrocarpus_Contig999.10.1|Name=mRNA_D-mesarthrocarpus_Contig999.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1912bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig999:18743..20654+ (Discosporangium mesarthrocarpum MT17_79)
GGAAGAGAAGAGGGATATGGGCAGTCCGGTTGTGGCAATGGAAAAAGCTC
ACGGGATGAGGGTGGGGGTGGGGGGTGGATCAGATGGAAGGGGGCAAGCG
GGTCTGGTCATAGCCGGGGGCACCATGTCAGACACTGACGCGAGGAAAGA
TGGGGTGATGCTAGAGTTGAGCAGGGAAGGAACTGCAACACAGGTTTCCT
GGGAAAATTCGGCTACCGCTGATGCCAACCGGCCCCTGGGCAGTCCTTGT
ACCACGAGCAGTACCTCCAGGACTGAGTACGCTGGCCCTGGGGCAGAGGA
TGTCAATGCCCGTATTGCTGCCGTGGTTGCTGAGGCCAAGGCCAAGGCTA
ATGCAGAGGGGCTCATGGGGGTGGCGGCCTCCACAGCCTCCGCAGCGAGG
AGGAAGCAACCAGCTCCTGTGGCACCTCTGACGAAAGAATATGCCTCCGC
CCGTGCTGTTGTGGTGCAGGCCAAGGTGAGCCCGAAATCAGTGTCTACAA
CGGAGATCAAGGCTCAGGCTCCAGCTATGAGCCTGGCCAGGGGGGTTAAG
GGCAATGATCTACCTCCCACTGCTACCCAGCTCAAGGCTAGTTCTGAGGG
CGTGGCGGGGAGACAACAAGAGGCACCTCATCAGGGGAGGGCACCTGGTC
TGACTACCTCTATTGACCAAAAACAAGGCAGGGAGAGCCCTGAGAAGACC
AGGGGGAGGGGTGCTGCTGCCTCCCCTCCCGCCAGGGCACAAGACGGATC
TGCTCAGGCTCCGGCACAGGCCGGAGCTCTCCAGGCCGGGAGCCAAGCTC
GGCTGGGGGCTGTGGCCCTGGGCACCACAGTTGCTCTGCCTGTGGCGCTG
TCGACAATGGCGGTGGCAGTGGGCAAGCCCAAACCTGTCCTCGTGGAAGC
AGGTCAGGCCAAGGCTGGTGCACCGCTTGCTAACGTGAAGCCTCGATCTA
CGCAGCTGTCGCCCCACCTGTCTGCTGCTACAGCGGCCACCATGAGGGTC
GTCAGGAAAGTCAAGGCGACTCCCAGAGGGGAAACCATGGCTGCTGCCAG
CCCCGTGGCAGCTTCAAGACAGTCCTTGCCTGCCCCCTCACCTCCCGAGG
CTTTGAGAGCTGGCGAGGGAGCAGGGAAAGGTGTGGGAGTGATGGTGACG
CCCGGCAGGCTGCTTCGGCCCCAGGGGAAATCTGGTGCCAGGCCCCCCGC
TGCCGCCACGTCTTTGTCCGCTCACCCAGACACAGAGGCGTTTGCCCCAG
CTCCATATTCGGGGGGTGTTGCTGCGGCTACCTCAGCCTTGGCGGTTATG
CCAATAAACTTAGCCCCCTCAACCTGCGCCTCGGCAGCAGATACAGCAAA
AGAGGCGCCGGCAAAGACTGCAGCGGCGGCATTGTTGGCGGCGACAGCGG
TCTCATCAAGTCTGGTGGTGCGCTGGCCGACCCGCCGGAGGGGCCCTGGG
CAGCGGCGCCCATGGCCATATGGGTTCGGTGGCCCGTACTTCACGCTCAA
GACCAAGGACCCTGCAGGGCAGCCACGGCGATTTGACCCAGGGAGGAACA
CCAGCTACGCAGGTGTCATCCCCCCCATGGAGGTCCTCCTGGAAGGGCTG
GTGAGGCCCATGCCCCTGCCCACGCTGCCACCCAAGATCAATTCCACTGG
CCCGGGTCAGGCCTCCCGTCAAGGTGGTTCCTCAGTGGGCCCGGGTGATG
GTGGTGGTGGTGTTGGTGGTGGTGCTCCTCTGGCCACTGGCACTGTTTCT
ATTGCTGTTTCTCCCACCGCCAGCGCTGCTGCTATTCCTGCCGATGGTAA
ATGTAGCAGGGACACAGGCGGGCCTGGCAAGGCCAGCAAGGGTGATGTTA
AGGTTCAGGTCCAAAGCAGTAGCAGCAGCAGGGGTGGCAGTGGCAGTGGA
AGTGGTGTTGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig999:18743..20654+

>mRNA_D-mesarthrocarpus_Contig999.10.1 ID=mRNA_D-mesarthrocarpus_Contig999.10.1|Name=mRNA_D-mesarthrocarpus_Contig999.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1896bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig999:18743..20654+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGCAGTCCGGTTGTGGCAATGGAAAAAGCTCACGGGATGAGGGTGGG
GGTGGGGGGTGGATCAGATGGAAGGGGGCAAGCGGGTCTGGTCATAGCCG
GGGGCACCATGTCAGACACTGACGCGAGGAAAGATGGGGTGATGCTAGAG
TTGAGCAGGGAAGGAACTGCAACACAGGTTTCCTGGGAAAATTCGGCTAC
CGCTGATGCCAACCGGCCCCTGGGCAGTCCTTGTACCACGAGCAGTACCT
CCAGGACTGAGTACGCTGGCCCTGGGGCAGAGGATGTCAATGCCCGTATT
GCTGCCGTGGTTGCTGAGGCCAAGGCCAAGGCTAATGCAGAGGGGCTCAT
GGGGGTGGCGGCCTCCACAGCCTCCGCAGCGAGGAGGAAGCAACCAGCTC
CTGTGGCACCTCTGACGAAAGAATATGCCTCCGCCCGTGCTGTTGTGGTG
CAGGCCAAGGTGAGCCCGAAATCAGTGTCTACAACGGAGATCAAGGCTCA
GGCTCCAGCTATGAGCCTGGCCAGGGGGGTTAAGGGCAATGATCTACCTC
CCACTGCTACCCAGCTCAAGGCTAGTTCTGAGGGCGTGGCGGGGAGACAA
CAAGAGGCACCTCATCAGGGGAGGGCACCTGGTCTGACTACCTCTATTGA
CCAAAAACAAGGCAGGGAGAGCCCTGAGAAGACCAGGGGGAGGGGTGCTG
CTGCCTCCCCTCCCGCCAGGGCACAAGACGGATCTGCTCAGGCTCCGGCA
CAGGCCGGAGCTCTCCAGGCCGGGAGCCAAGCTCGGCTGGGGGCTGTGGC
CCTGGGCACCACAGTTGCTCTGCCTGTGGCGCTGTCGACAATGGCGGTGG
CAGTGGGCAAGCCCAAACCTGTCCTCGTGGAAGCAGGTCAGGCCAAGGCT
GGTGCACCGCTTGCTAACGTGAAGCCTCGATCTACGCAGCTGTCGCCCCA
CCTGTCTGCTGCTACAGCGGCCACCATGAGGGTCGTCAGGAAAGTCAAGG
CGACTCCCAGAGGGGAAACCATGGCTGCTGCCAGCCCCGTGGCAGCTTCA
AGACAGTCCTTGCCTGCCCCCTCACCTCCCGAGGCTTTGAGAGCTGGCGA
GGGAGCAGGGAAAGGTGTGGGAGTGATGGTGACGCCCGGCAGGCTGCTTC
GGCCCCAGGGGAAATCTGGTGCCAGGCCCCCCGCTGCCGCCACGTCTTTG
TCCGCTCACCCAGACACAGAGGCGTTTGCCCCAGCTCCATATTCGGGGGG
TGTTGCTGCGGCTACCTCAGCCTTGGCGGTTATGCCAATAAACTTAGCCC
CCTCAACCTGCGCCTCGGCAGCAGATACAGCAAAAGAGGCGCCGGCAAAG
ACTGCAGCGGCGGCATTGTTGGCGGCGACAGCGGTCTCATCAAGTCTGGT
GGTGCGCTGGCCGACCCGCCGGAGGGGCCCTGGGCAGCGGCGCCCATGGC
CATATGGGTTCGGTGGCCCGTACTTCACGCTCAAGACCAAGGACCCTGCA
GGGCAGCCACGGCGATTTGACCCAGGGAGGAACACCAGCTACGCAGGTGT
CATCCCCCCCATGGAGGTCCTCCTGGAAGGGCTGGTGAGGCCCATGCCCC
TGCCCACGCTGCCACCCAAGATCAATTCCACTGGCCCGGGTCAGGCCTCC
CGTCAAGGTGGTTCCTCAGTGGGCCCGGGTGATGGTGGTGGTGGTGTTGG
TGGTGGTGCTCCTCTGGCCACTGGCACTGTTTCTATTGCTGTTTCTCCCA
CCGCCAGCGCTGCTGCTATTCCTGCCGATGGTAAATGTAGCAGGGACACA
GGCGGGCCTGGCAAGGCCAGCAAGGGTGATGTTAAGGTTCAGGTCCAAAG
CAGTAGCAGCAGCAGGGGTGGCAGTGGCAGTGGAAGTGGTGTTGGG
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