mRNA_D-mesarthrocarpus_Contig9956.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9956.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9956.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D7FJS9_9PROT (DNA polymerase III subunit epsilon n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJS9_9PROT)

HSP 1 Score: 388 bits (996), Expect = 1.620e-131
Identity = 196/232 (84.48%), Postives = 208/232 (89.66%), Query Frame = 2
Query:  650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAPPAEIRPARPHAASAAELAAHEAFIATLKQPMWLGD 1345
            MREIVLDTETTGLDPINGDRLVEIGCVEV NHIATGETYHQYVNPQR+MPAGAF VHGLS+EFLSG+P+F D+VDDFL FIG+DPLVIHNA FDMGFINAELRRLKRRELPM+QSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGL LAA E G   K SD E+       EIRP RPHA SA EL AHEAF+++L+QPMWLGD
Sbjct:    1 MREIVLDTETTGLDPINGDRLVEIGCVEVVNHIATGETYHQYVNPQREMPAGAFDVHGLSKEFLSGYPLFSDIVDDFLDFIGNDPLVIHNAIFDMGFINAELRRLKRRELPMSQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLKLAAVEVGVRIKASDAENNRSVSIKEIRPLRPHAPSAEELLAHEAFVSSLEQPMWLGD 232          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D7FJS2_9PROT (Dephospho-CoA kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJS2_9PROT)

HSP 1 Score: 377 bits (968), Expect = 2.300e-127
Identity = 199/229 (86.90%), Postives = 209/229 (91.27%), Query Frame = 1
Query:    1 MIVLGLSGSIGMGKSTASAMFCRMGVPVYDSDASVHVVLGKGGAAVVPIAAAFPGVVVEGAVDRDALGKRVFGDDAALKTLEAIVHPLVRRRQDGFLKRCAARRVPLAVLDIPLLFEVRLDVRCDVLVVVSAPARIQAARVLARPGMTREKFDGILARQMPDAEKRRRADFVVPSGRGKAETLRRLTRIARLARDMSPSHWPPDMFAERTVHRRSPDARNRPRYRNHRA 687
            MIVLGLSGSIGMGKSTASAMF RMGVPVYDSDASVH VL +GGAAV PI AAFPGVV  GAVDRD LGKRVFGD AALKTLEAIVHPLVRRRQD FLKRCAARRVPLAVLDIPLLFE RLDVRCDV++VVSAP R Q ARV+ARPGMTREKFDGIL RQMPDAEKRR ADFVV S RGKA+TLRRLT+IARL RD++P+HWPPDMF+ERTVHRRS DARNRPRYRNHRA
Sbjct:    1 MIVLGLSGSIGMGKSTASAMFRRMGVPVYDSDASVHAVLCRGGAAVAPITAAFPGVVAGGAVDRDELGKRVFGDTAALKTLEAIVHPLVRRRQDDFLKRCAARRVPLAVLDIPLLFETRLDVRCDVVIVVSAPTRTQVARVMARPGMTREKFDGILDRQMPDAEKRRLADFVVASARGKAQTLRRLTQIARLCRDITPNHWPPDMFSERTVHRRSTDARNRPRYRNHRA 229          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A3D2BTN0_9PROT (DNA polymerase III subunit epsilon n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BTN0_9PROT)

HSP 1 Score: 354 bits (909), Expect = 2.230e-118
Identity = 178/229 (77.73%), Postives = 197/229 (86.03%), Query Frame = 2
Query:  650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAPPAEIRPARPHAASAAELAAHEAFIATLKQPMW 1336
            MRE+VLDTETTGLDP+NGDR+VEIGCVE+FNHIATG+TYHQY+NP+R MP GAFAVHGLSEEFLSG+PVF DVVD FL FIGDD LVIHNA FDMGFINAELRRL+R  LPM+QS+DTV MARR+FPGAPASLDALCRR DIDNSSRT HGALLDAELLAEVYLELRGGRQPGLSLAAAE  A + +   E     P AE+RP RPHA +A E AAH AF+ TL +P+W
Sbjct:    1 MRELVLDTETTGLDPLNGDRIVEIGCVEIFNHIATGQTYHQYINPERAMPTGAFAVHGLSEEFLSGYPVFADVVDGFLDFIGDDQLVIHNAKFDMGFINAELRRLERPALPMSQSIDTVTMARRRFPGAPASLDALCRRLDIDNSSRTKHGALLDAELLAEVYLELRGGRQPGLSLAAAEVDAYSASDQAEPFDLQPDAEVRPPRPHAPTAEESAAHAAFVETLNEPIW 229          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D8PT43_9PROT (Dephospho-CoA kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PT43_9PROT)

HSP 1 Score: 350 bits (897), Expect = 1.310e-116
Identity = 186/229 (81.22%), Postives = 198/229 (86.46%), Query Frame = 1
Query:    1 MIVLGLSGSIGMGKSTASAMFCRMGVPVYDSDASVHVVLGKGGAAVVPIAAAFPGVVVEGAVDRDALGKRVFGDDAALKTLEAIVHPLVRRRQDGFLKRCAARRVPLAVLDIPLLFEVRLDVRCDVLVVVSAPARIQAARVLARPGMTREKFDGILARQMPDAEKRRRADFVVPSGRGKAETLRRLTRIARLARDMSPSHWPPDMFAERTVHRRSPDARNRPRYRNHRA 687
            M VLGL+GSIGMGKSTASAMF  MG PVYDSDASVH VL KGG+AV PI AAFPGVV +GAVDRDALGKRVFGDDAAL+TLE IVHPL+RRRQD FLKRC+  R PL VLDIPLLFEVRLD RCD  VV+SAPA IQAARVLARPGMT+EKFDGILARQMPDAEKRR ADFVVPS RG+ ETLRRL +IARL   M  +HWPPD FAERT  RRSPDAR+RPRYRNHRA
Sbjct:    1 MFVLGLTGSIGMGKSTASAMFRCMGAPVYDSDASVHAVLRKGGSAVAPIDAAFPGVVADGAVDRDALGKRVFGDDAALRTLEGIVHPLIRRRQDDFLKRCSRARAPLVVLDIPLLFEVRLDGRCDASVVISAPAFIQAARVLARPGMTQEKFDGILARQMPDAEKRRLADFVVPSNRGRGETLRRLQQIARLILSMPATHWPPDPFAERTADRRSPDARDRPRYRNHRA 229          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D8PTF8_9PROT (DNA polymerase III subunit epsilon n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PTF8_9PROT)

HSP 1 Score: 328 bits (840), Expect = 7.060e-108
Identity = 169/235 (71.91%), Postives = 189/235 (80.43%), Query Frame = 2
Query:  650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAPPAEIRPARPHAASAAELAAHEAFIATLKQPMWLGDAEA 1354
            MREIVLDTETTGLDP +G RLVEIGC+E+ NHIATGE YHQY+NP+RDMPAGAF VHGLS E LSG PV  DV   F+ FIG  PLVIHNA+FDMGF N+E +RL +  LPM+QSVDTV MAR +FPGAPASLDALCRRF+ DN +RT HGALLDAELLAEVYLELRGGRQPGLSLA AEAGAA   +D  + +  P AE RP RPHA +  E+AAHEAF+ATL  PMW  D EA
Sbjct:    1 MREIVLDTETTGLDPNDGHRLVEIGCIELVNHIATGEXYHQYINPERDMPAGAFEVHGLSAEXLSGFPVXADVAXAFVDFIGXSPLVIHNAAFDMGFXNSEXKRLNKPSLPMSQSVDTVAMARXRFPGAPASLDALCRRFEXDNXARTRHGALLDAELLAEVYLELRGGRQPGLSLAGAEAGAAADVADGAAPL-TPVAEXRPPRPHALTDEEVAAHEAFVATLTDPMWSRDXEA 234          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A3D2BTD1_9PROT (Dephospho-CoA kinase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BTD1_9PROT)

HSP 1 Score: 323 bits (828), Expect = 3.030e-106
Identity = 173/224 (77.23%), Postives = 189/224 (84.38%), Query Frame = 1
Query:    1 MIVLGLSGSIGMGKSTASAMFCRMGVPVYDSDASVHVVLGKGGAAVVPIAAAFPGVVVEGAVDRDALGKRVFGDDAALKTLEAIVHPLVRRRQDGFLKRCAARRVPLAVLDIPLLFEVRLDVRCDVLVVVSAPARIQAARVLARPGMTREKFDGILARQMPDAEKRRRADFVVPSGRGKAETLRRLTRIARLARDMSPSHWPPDMFAERTVHRRSPDARNRPRY 672
            MI+LGL+GSIGMGKSTAS MF RMGVPVYDSDASVH+VL K GAAV PI AAFPGVV +GAVDRDALGKRVFGDDAALK LE+IVHPLVR+ QD FLK CA RRVPL VLDIPLLFE +LDVRCD  +VVSAP  +Q ARVLAR GMT+EKFDGILARQ+PDA KRRRADFVVPSG GKAETLR L+RI +L +    +HWPPD +AER V RRS  AR RPRY
Sbjct:    1 MIILGLTGSIGMGKSTASTMFRRMGVPVYDSDASVHIVLSKCGAAVKPINAAFPGVVSDGAVDRDALGKRVFGDDAALKALESIVHPLVRKVQDNFLKGCAVRRVPLVVLDIPLLFEAKLDVRCDAAIVVSAPGFLQKARVLARTGMTQEKFDGILARQIPDAIKRRRADFVVPSGCGKAETLRHLSRIVKLIKQAPATHWPPDAYAERNVDRRSTYARARPRY 224          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2S6QAV6_9PROT (DNA polymerase III subunit epsilon n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QAV6_9PROT)

HSP 1 Score: 315 bits (807), Expect = 7.090e-103
Identity = 161/238 (67.65%), Postives = 191/238 (80.25%), Query Frame = 2
Query:  650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAP---PAEIRPARPHAASAAELAAHEAFIATLKQPMWLGDAEA 1354
            MRE++LDTETTGLDP+NGDRLVEIGC+EVFNHI TG+TYHQY+NP+RDMPAGA AVHGLSEEFL   PVF  VVDDFL FI  DPLVIHNA FD+ F+N+ELRRL R  LPM+++VDTV ++RR+FPGAPASLDALCRRF +DNSSRT HGALLDAELLAEVYLELRGGRQP L LA+ E+ A    S  +S  PA     + I P RPH+ +A E+AAHE F+++L+  +W    +A
Sbjct:    1 MRELILDTETTGLDPLNGDRLVEIGCIEVFNHIPTGKTYHQYINPERDMPAGALAVHGLSEEFLGDFPVFAKVVDDFLNFIASDPLVIHNAKFDIDFLNSELRRLNRPVLPMSRTVDTVAISRRRFPGAPASLDALCRRFAVDNSSRTKHGALLDAELLAEVYLELRGGRQPDLGLASVESVA---MSANDSPAPADIISGSNISPPRPHSPTADEIAAHETFVSSLENSLWFQVVDA 235          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D8G5M2_9PROT (DNA polymerase III subunit epsilon n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G5M2_9PROT)

HSP 1 Score: 306 bits (784), Expect = 2.110e-99
Identity = 158/238 (66.39%), Postives = 179/238 (75.21%), Query Frame = 2
Query:  650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPA--------PPAEIRPARPHAASAAELAAHEAFIATLKQPMWL 1339
            MRE+ LDTETTGLD + GDRLVEIGC+E+ NHI TG+TYHQY+NP+RDMP+GAFA+HGLSEEFL G PVF D+ D FL FI DDPL+IHNA FDMGFINAELR L    LPM++S+DTV +ARR+FPGAPASLDALCRRF IDNSSR  HGALLDAELLAEVYLE  GGRQP LSL        T+  D+ S I          P   +RP RPH A   ELAAH+AF+A L   MWL
Sbjct:    1 MRELALDTETTGLDALTGDRLVEIGCIELVNHIPTGKTYHQYINPERDMPSGAFAIHGLSEEFLRGFPVFADIADAFLEFINDDPLIIHNAKFDMGFINAELRLLNHPLLPMSRSIDTVALARRRFPGAPASLDALCRRFXIDNSSRIKHGALLDAELLAEVYLEFCGGRQPDLSL--------TQDKDENSXIDDAAAVKRLNPKKALRPPRPHTALPDELAAHDAFLAKLNDSMWL 230          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2S6QAK3_9PROT (Dephospho-CoA kinase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QAK3_9PROT)

HSP 1 Score: 303 bits (777), Expect = 1.540e-98
Identity = 161/224 (71.88%), Postives = 183/224 (81.70%), Query Frame = 1
Query:    1 MIVLGLSGSIGMGKSTASAMFCRMGVPVYDSDASVHVVLGKGGAAVVPIAAAFPGVVVEGAVDRDALGKRVFGDDAALKTLEAIVHPLVRRRQDGFLKRCAARRVPLAVLDIPLLFEVRLDVRCDVLVVVSAPARIQAARVLARPGMTREKFDGILARQMPDAEKRRRADFVVPSGRGKAETLRRLTRIARLARDMSPSHWPPDMFAERTVHRRSPDARNRPRY 672
            MI++GL+GSIGMGKSTA++MF RM +PVYDSD +VH VLGKGG+AV  I  AFP VV++G VDR ALG RVFGD AA++ LE I+HPLVR+RQD FLKRC ARRV LAVLDIPLLFEV LDVRCD  +VVSAPA IQ ARVLARPGMTREKFD I ARQ+PDA KRRRADFVVPSGRG+AETLR L RIA+L R  +  HWPP+++ ER V RRS   R  PRY
Sbjct:    1 MIIVGLTGSIGMGKSTAASMFRRMNIPVYDSDMAVHTVLGKGGSAVKSIEVAFPDVVIDGVVDRHALGDRVFGDSAAIEKLECIIHPLVRQRQDWFLKRCGARRVGLAVLDIPLLFEVGLDVRCDASIVVSAPASIQEARVLARPGMTREKFDDIKARQIPDAVKRRRADFVVPSGRGRAETLRHLLRIAKLMRKEAARHWPPNVYVERKVKRRSMHERANPRY 224          
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D9F1P2_9PROT (DNA polymerase III subunit epsilon n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F1P2_9PROT)

HSP 1 Score: 303 bits (776), Expect = 1.960e-98
Identity = 158/232 (68.10%), Postives = 179/232 (77.16%), Query Frame = 2
Query:  650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAA---AEAGAATKTSDQESEIPAPPAEIRPARPHAASAAELAAHEAFIATLKQPMW 1336
            MRE+VLDTETTGLDP++G R+VEIGCVE+ NH+A+G TYHQYVNP+RDMPA AF VHGLSEEFLSGHPVF DV D F+ F+GD PLVIHNASFDMGFINAEL RLKR  +PM+Q+VDTV MAR+KFPGA ASLDALC+RF IDN+ R  HGALLD+ LLAEVYLEL GGRQP L LAA   AEA A  K              +RP R HA  A E AAH+AF+  L  P+W
Sbjct:    1 MREVVLDTETTGLDPLSGHRIVEIGCVELVNHVASGRTYHQYVNPERDMPAEAFRVHGLSEEFLSGHPVFADVADAFVDFVGDAPLVIHNASFDMGFINAELARLKRPSIPMSQAVDTVSMARKKFPGAGASLDALCKRFQIDNTHRDLHGALLDSRLLAEVYLELIGGRQPDLELAAEIQAEAVAVEKV-------------VRPPRTHAPLAEEEAAHQAFLEKLNDPVW 219          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7FJS9_9PROT1.620e-13184.48DNA polymerase III subunit epsilon n=1 Tax=Rhodosp... [more]
A0A2D7FJS2_9PROT2.300e-12786.90Dephospho-CoA kinase n=1 Tax=Rhodospirillaceae bac... [more]
A0A3D2BTN0_9PROT2.230e-11877.73DNA polymerase III subunit epsilon n=2 Tax=Rhodosp... [more]
A0A2D8PT43_9PROT1.310e-11681.22Dephospho-CoA kinase n=1 Tax=Rhodospirillaceae bac... [more]
A0A2D8PTF8_9PROT7.060e-10871.91DNA polymerase III subunit epsilon n=1 Tax=Rhodosp... [more]
A0A3D2BTD1_9PROT3.030e-10677.23Dephospho-CoA kinase n=2 Tax=Rhodospirillaceae bac... [more]
A0A2S6QAV6_9PROT7.090e-10367.65DNA polymerase III subunit epsilon n=1 Tax=Alphapr... [more]
A0A2D8G5M2_9PROT2.110e-9966.39DNA polymerase III subunit epsilon n=1 Tax=Alphapr... [more]
A0A2S6QAK3_9PROT1.540e-9871.88Dephospho-CoA kinase n=1 Tax=Alphaproteobacteria b... [more]
A0A2D9F1P2_9PROT1.960e-9868.10DNA polymerase III subunit epsilon n=2 Tax=Rhodosp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9956contigD-mesarthrocarpus_Contig9956:1156..2518 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog331869.BAL199_11121
Preferred namednaQ
PFAMsRNase_T
Model size1363
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC02795
KEGG koko:K02342
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440
KEGG ModuleM00260
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234
Exons1
Evalue1.14e-97
EggNOG OGsCOG0847@1|root,COG0847@2|Bacteria,1MV8Z@1224|Proteobacteria,2TTFF@28211|Alphaproteobacteria,4BQ0C@82117|unclassified Alphaproteobacteria
EC2.7.7.7
DescriptionDNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Cds size714
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791145.43275-CDS-D-mesarthrocarpus_Contig9956:1155..18691680791145.43275-CDS-D-mesarthrocarpus_Contig9956:1155..1869Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9956 1156..1869 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791145.4506807-UTR-D-mesarthrocarpus_Contig9956:1869..25181680791145.4506807-UTR-D-mesarthrocarpus_Contig9956:1869..2518Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9956 1870..2518 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9956.2.1prot_D-mesarthrocarpus_Contig9956.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9956 1156..1869 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9956.2.1

>prot_D-mesarthrocarpus_Contig9956.2.1 ID=prot_D-mesarthrocarpus_Contig9956.2.1|Name=mRNA_D-mesarthrocarpus_Contig9956.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=238bp
MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMP
AGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINA
ELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYH
GALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAPPAE
IRPARPHAASAAELAAHEAFIATLKQPMWLGDAEADS*
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mRNA from alignment at D-mesarthrocarpus_Contig9956:1156..2518-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9956.2.1 ID=mRNA_D-mesarthrocarpus_Contig9956.2.1|Name=mRNA_D-mesarthrocarpus_Contig9956.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1363bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9956:1156..2518- (Discosporangium mesarthrocarpum MT17_79)
ATGATCGTCCTCGGCCTTTCCGGGTCTATCGGCATGGGCAAGTCCACTGC GTCGGCGATGTTCTGCCGCATGGGGGTACCGGTATACGATTCAGATGCAT CGGTGCATGTGGTGCTGGGCAAAGGCGGCGCTGCGGTGGTACCGATTGCT GCGGCCTTTCCCGGTGTTGTCGTCGAGGGCGCTGTTGACCGCGATGCGCT GGGCAAGCGGGTCTTTGGCGACGATGCGGCGCTTAAAACGCTGGAAGCGA TCGTGCATCCGCTGGTGCGTCGCCGACAGGACGGTTTTCTGAAAAGGTGC GCGGCGCGCAGGGTGCCGCTTGCGGTGCTGGATATCCCGCTTTTGTTCGA GGTCCGGCTTGATGTGCGGTGCGACGTTCTGGTCGTGGTCTCCGCTCCCG CACGGATACAGGCGGCGCGGGTACTGGCGCGGCCGGGCATGACACGGGAA AAGTTCGACGGCATTCTCGCGCGCCAGATGCCCGATGCAGAGAAGCGCCG ACGCGCGGATTTTGTTGTGCCCAGCGGGCGCGGCAAGGCAGAAACCTTGC GCCGGCTCACGCGAATTGCGAGACTCGCCCGTGACATGAGTCCGAGCCAC TGGCCGCCGGACATGTTTGCCGAGAGAACCGTTCACCGCCGGAGCCCTGA TGCGCGAAATCGTCCTCGATACCGAAACCACCGGGCTTGATCCCATTAAC GGCGACCGGCTGGTTGAAATCGGCTGCGTCGAAGTGTTCAACCATATCGC TACCGGCGAGACCTATCATCAATACGTCAATCCGCAGCGCGACATGCCCG CCGGGGCGTTTGCCGTCCACGGGCTGAGTGAGGAGTTCCTGTCGGGCCAT CCTGTGTTCAAGGATGTCGTGGACGATTTTCTCGCCTTCATCGGTGACGA TCCGCTGGTGATTCACAATGCCAGCTTCGATATGGGTTTTATCAATGCGG AACTGCGCCGTCTGAAACGCCGCGAGCTGCCAATGACGCAGTCGGTCGAT ACCGTGCGCATGGCGCGGCGAAAGTTCCCGGGCGCGCCGGCGTCGCTCGA CGCCCTTTGCCGCCGCTTCGATATCGACAATTCGTCGCGCACCTATCATG GCGCGCTGCTCGATGCGGAGCTGCTGGCCGAAGTGTATCTGGAACTGCGC GGCGGACGTCAGCCGGGCTTGAGCCTGGCGGCAGCGGAAGCGGGTGCCGC GACCAAGACATCGGACCAGGAAAGCGAAATTCCCGCCCCGCCCGCCGAAA TCCGCCCGGCCCGGCCGCATGCGGCGTCCGCCGCAGAGCTTGCCGCGCAT GAGGCGTTTATAGCGACATTGAAACAGCCCATGTGGCTGGGAGATGCGGA AGCGGATAGCTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9956:1156..2518-

>mRNA_D-mesarthrocarpus_Contig9956.2.1 ID=mRNA_D-mesarthrocarpus_Contig9956.2.1|Name=mRNA_D-mesarthrocarpus_Contig9956.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=714bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9956:1156..2518- (Discosporangium mesarthrocarpum MT17_79)
ATGCGCGAAATCGTCCTCGATACCGAAACCACCGGGCTTGATCCCATTAA
CGGCGACCGGCTGGTTGAAATCGGCTGCGTCGAAGTGTTCAACCATATCG
CTACCGGCGAGACCTATCATCAATACGTCAATCCGCAGCGCGACATGCCC
GCCGGGGCGTTTGCCGTCCACGGGCTGAGTGAGGAGTTCCTGTCGGGCCA
TCCTGTGTTCAAGGATGTCGTGGACGATTTTCTCGCCTTCATCGGTGACG
ATCCGCTGGTGATTCACAATGCCAGCTTCGATATGGGTTTTATCAATGCG
GAACTGCGCCGTCTGAAACGCCGCGAGCTGCCAATGACGCAGTCGGTCGA
TACCGTGCGCATGGCGCGGCGAAAGTTCCCGGGCGCGCCGGCGTCGCTCG
ACGCCCTTTGCCGCCGCTTCGATATCGACAATTCGTCGCGCACCTATCAT
GGCGCGCTGCTCGATGCGGAGCTGCTGGCCGAAGTGTATCTGGAACTGCG
CGGCGGACGTCAGCCGGGCTTGAGCCTGGCGGCAGCGGAAGCGGGTGCCG
CGACCAAGACATCGGACCAGGAAAGCGAAATTCCCGCCCCGCCCGCCGAA
ATCCGCCCGGCCCGGCCGCATGCGGCGTCCGCCGCAGAGCTTGCCGCGCA
TGAGGCGTTTATAGCGACATTGAAACAGCCCATGTGGCTGGGAGATGCGG
AAGCGGATAGCTAG
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