mRNA_D-mesarthrocarpus_Contig9956.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D7FJS9_9PROT (DNA polymerase III subunit epsilon n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJS9_9PROT) HSP 1 Score: 388 bits (996), Expect = 1.620e-131 Identity = 196/232 (84.48%), Postives = 208/232 (89.66%), Query Frame = 2
Query: 650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAPPAEIRPARPHAASAAELAAHEAFIATLKQPMWLGD 1345
MREIVLDTETTGLDPINGDRLVEIGCVEV NHIATGETYHQYVNPQR+MPAGAF VHGLS+EFLSG+P+F D+VDDFL FIG+DPLVIHNA FDMGFINAELRRLKRRELPM+QSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGL LAA E G K SD E+ EIRP RPHA SA EL AHEAF+++L+QPMWLGD
Sbjct: 1 MREIVLDTETTGLDPINGDRLVEIGCVEVVNHIATGETYHQYVNPQREMPAGAFDVHGLSKEFLSGYPLFSDIVDDFLDFIGNDPLVIHNAIFDMGFINAELRRLKRRELPMSQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLKLAAVEVGVRIKASDAENNRSVSIKEIRPLRPHAPSAEELLAHEAFVSSLEQPMWLGD 232
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D7FJS2_9PROT (Dephospho-CoA kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJS2_9PROT) HSP 1 Score: 377 bits (968), Expect = 2.300e-127 Identity = 199/229 (86.90%), Postives = 209/229 (91.27%), Query Frame = 1
Query: 1 MIVLGLSGSIGMGKSTASAMFCRMGVPVYDSDASVHVVLGKGGAAVVPIAAAFPGVVVEGAVDRDALGKRVFGDDAALKTLEAIVHPLVRRRQDGFLKRCAARRVPLAVLDIPLLFEVRLDVRCDVLVVVSAPARIQAARVLARPGMTREKFDGILARQMPDAEKRRRADFVVPSGRGKAETLRRLTRIARLARDMSPSHWPPDMFAERTVHRRSPDARNRPRYRNHRA 687
MIVLGLSGSIGMGKSTASAMF RMGVPVYDSDASVH VL +GGAAV PI AAFPGVV GAVDRD LGKRVFGD AALKTLEAIVHPLVRRRQD FLKRCAARRVPLAVLDIPLLFE RLDVRCDV++VVSAP R Q ARV+ARPGMTREKFDGIL RQMPDAEKRR ADFVV S RGKA+TLRRLT+IARL RD++P+HWPPDMF+ERTVHRRS DARNRPRYRNHRA
Sbjct: 1 MIVLGLSGSIGMGKSTASAMFRRMGVPVYDSDASVHAVLCRGGAAVAPITAAFPGVVAGGAVDRDELGKRVFGDTAALKTLEAIVHPLVRRRQDDFLKRCAARRVPLAVLDIPLLFETRLDVRCDVVIVVSAPTRTQVARVMARPGMTREKFDGILDRQMPDAEKRRLADFVVASARGKAQTLRRLTQIARLCRDITPNHWPPDMFSERTVHRRSTDARNRPRYRNHRA 229
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A3D2BTN0_9PROT (DNA polymerase III subunit epsilon n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BTN0_9PROT) HSP 1 Score: 354 bits (909), Expect = 2.230e-118 Identity = 178/229 (77.73%), Postives = 197/229 (86.03%), Query Frame = 2
Query: 650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAPPAEIRPARPHAASAAELAAHEAFIATLKQPMW 1336
MRE+VLDTETTGLDP+NGDR+VEIGCVE+FNHIATG+TYHQY+NP+R MP GAFAVHGLSEEFLSG+PVF DVVD FL FIGDD LVIHNA FDMGFINAELRRL+R LPM+QS+DTV MARR+FPGAPASLDALCRR DIDNSSRT HGALLDAELLAEVYLELRGGRQPGLSLAAAE A + + E P AE+RP RPHA +A E AAH AF+ TL +P+W
Sbjct: 1 MRELVLDTETTGLDPLNGDRIVEIGCVEIFNHIATGQTYHQYINPERAMPTGAFAVHGLSEEFLSGYPVFADVVDGFLDFIGDDQLVIHNAKFDMGFINAELRRLERPALPMSQSIDTVTMARRRFPGAPASLDALCRRLDIDNSSRTKHGALLDAELLAEVYLELRGGRQPGLSLAAAEVDAYSASDQAEPFDLQPDAEVRPPRPHAPTAEESAAHAAFVETLNEPIW 229
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D8PT43_9PROT (Dephospho-CoA kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PT43_9PROT) HSP 1 Score: 350 bits (897), Expect = 1.310e-116 Identity = 186/229 (81.22%), Postives = 198/229 (86.46%), Query Frame = 1
Query: 1 MIVLGLSGSIGMGKSTASAMFCRMGVPVYDSDASVHVVLGKGGAAVVPIAAAFPGVVVEGAVDRDALGKRVFGDDAALKTLEAIVHPLVRRRQDGFLKRCAARRVPLAVLDIPLLFEVRLDVRCDVLVVVSAPARIQAARVLARPGMTREKFDGILARQMPDAEKRRRADFVVPSGRGKAETLRRLTRIARLARDMSPSHWPPDMFAERTVHRRSPDARNRPRYRNHRA 687
M VLGL+GSIGMGKSTASAMF MG PVYDSDASVH VL KGG+AV PI AAFPGVV +GAVDRDALGKRVFGDDAAL+TLE IVHPL+RRRQD FLKRC+ R PL VLDIPLLFEVRLD RCD VV+SAPA IQAARVLARPGMT+EKFDGILARQMPDAEKRR ADFVVPS RG+ ETLRRL +IARL M +HWPPD FAERT RRSPDAR+RPRYRNHRA
Sbjct: 1 MFVLGLTGSIGMGKSTASAMFRCMGAPVYDSDASVHAVLRKGGSAVAPIDAAFPGVVADGAVDRDALGKRVFGDDAALRTLEGIVHPLIRRRQDDFLKRCSRARAPLVVLDIPLLFEVRLDGRCDASVVISAPAFIQAARVLARPGMTQEKFDGILARQMPDAEKRRLADFVVPSNRGRGETLRRLQQIARLILSMPATHWPPDPFAERTADRRSPDARDRPRYRNHRA 229
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D8PTF8_9PROT (DNA polymerase III subunit epsilon n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PTF8_9PROT) HSP 1 Score: 328 bits (840), Expect = 7.060e-108 Identity = 169/235 (71.91%), Postives = 189/235 (80.43%), Query Frame = 2
Query: 650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAPPAEIRPARPHAASAAELAAHEAFIATLKQPMWLGDAEA 1354
MREIVLDTETTGLDP +G RLVEIGC+E+ NHIATGE YHQY+NP+RDMPAGAF VHGLS E LSG PV DV F+ FIG PLVIHNA+FDMGF N+E +RL + LPM+QSVDTV MAR +FPGAPASLDALCRRF+ DN +RT HGALLDAELLAEVYLELRGGRQPGLSLA AEAGAA +D + + P AE RP RPHA + E+AAHEAF+ATL PMW D EA
Sbjct: 1 MREIVLDTETTGLDPNDGHRLVEIGCIELVNHIATGEXYHQYINPERDMPAGAFEVHGLSAEXLSGFPVXADVAXAFVDFIGXSPLVIHNAAFDMGFXNSEXKRLNKPSLPMSQSVDTVAMARXRFPGAPASLDALCRRFEXDNXARTRHGALLDAELLAEVYLELRGGRQPGLSLAGAEAGAAADVADGAAPL-TPVAEXRPPRPHALTDEEVAAHEAFVATLTDPMWSRDXEA 234
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A3D2BTD1_9PROT (Dephospho-CoA kinase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BTD1_9PROT) HSP 1 Score: 323 bits (828), Expect = 3.030e-106 Identity = 173/224 (77.23%), Postives = 189/224 (84.38%), Query Frame = 1
Query: 1 MIVLGLSGSIGMGKSTASAMFCRMGVPVYDSDASVHVVLGKGGAAVVPIAAAFPGVVVEGAVDRDALGKRVFGDDAALKTLEAIVHPLVRRRQDGFLKRCAARRVPLAVLDIPLLFEVRLDVRCDVLVVVSAPARIQAARVLARPGMTREKFDGILARQMPDAEKRRRADFVVPSGRGKAETLRRLTRIARLARDMSPSHWPPDMFAERTVHRRSPDARNRPRY 672
MI+LGL+GSIGMGKSTAS MF RMGVPVYDSDASVH+VL K GAAV PI AAFPGVV +GAVDRDALGKRVFGDDAALK LE+IVHPLVR+ QD FLK CA RRVPL VLDIPLLFE +LDVRCD +VVSAP +Q ARVLAR GMT+EKFDGILARQ+PDA KRRRADFVVPSG GKAETLR L+RI +L + +HWPPD +AER V RRS AR RPRY
Sbjct: 1 MIILGLTGSIGMGKSTASTMFRRMGVPVYDSDASVHIVLSKCGAAVKPINAAFPGVVSDGAVDRDALGKRVFGDDAALKALESIVHPLVRKVQDNFLKGCAVRRVPLVVLDIPLLFEAKLDVRCDAAIVVSAPGFLQKARVLARTGMTQEKFDGILARQIPDAIKRRRADFVVPSGCGKAETLRHLSRIVKLIKQAPATHWPPDAYAERNVDRRSTYARARPRY 224
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2S6QAV6_9PROT (DNA polymerase III subunit epsilon n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QAV6_9PROT) HSP 1 Score: 315 bits (807), Expect = 7.090e-103 Identity = 161/238 (67.65%), Postives = 191/238 (80.25%), Query Frame = 2
Query: 650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPAP---PAEIRPARPHAASAAELAAHEAFIATLKQPMWLGDAEA 1354
MRE++LDTETTGLDP+NGDRLVEIGC+EVFNHI TG+TYHQY+NP+RDMPAGA AVHGLSEEFL PVF VVDDFL FI DPLVIHNA FD+ F+N+ELRRL R LPM+++VDTV ++RR+FPGAPASLDALCRRF +DNSSRT HGALLDAELLAEVYLELRGGRQP L LA+ E+ A S +S PA + I P RPH+ +A E+AAHE F+++L+ +W +A
Sbjct: 1 MRELILDTETTGLDPLNGDRLVEIGCIEVFNHIPTGKTYHQYINPERDMPAGALAVHGLSEEFLGDFPVFAKVVDDFLNFIASDPLVIHNAKFDIDFLNSELRRLNRPVLPMSRTVDTVAISRRRFPGAPASLDALCRRFAVDNSSRTKHGALLDAELLAEVYLELRGGRQPDLGLASVESVA---MSANDSPAPADIISGSNISPPRPHSPTADEIAAHETFVSSLENSLWFQVVDA 235
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D8G5M2_9PROT (DNA polymerase III subunit epsilon n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G5M2_9PROT) HSP 1 Score: 306 bits (784), Expect = 2.110e-99 Identity = 158/238 (66.39%), Postives = 179/238 (75.21%), Query Frame = 2
Query: 650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAAAEAGAATKTSDQESEIPA--------PPAEIRPARPHAASAAELAAHEAFIATLKQPMWL 1339
MRE+ LDTETTGLD + GDRLVEIGC+E+ NHI TG+TYHQY+NP+RDMP+GAFA+HGLSEEFL G PVF D+ D FL FI DDPL+IHNA FDMGFINAELR L LPM++S+DTV +ARR+FPGAPASLDALCRRF IDNSSR HGALLDAELLAEVYLE GGRQP LSL T+ D+ S I P +RP RPH A ELAAH+AF+A L MWL
Sbjct: 1 MRELALDTETTGLDALTGDRLVEIGCIELVNHIPTGKTYHQYINPERDMPSGAFAIHGLSEEFLRGFPVFADIADAFLEFINDDPLIIHNAKFDMGFINAELRLLNHPLLPMSRSIDTVALARRRFPGAPASLDALCRRFXIDNSSRIKHGALLDAELLAEVYLEFCGGRQPDLSL--------TQDKDENSXIDDAAAVKRLNPKKALRPPRPHTALPDELAAHDAFLAKLNDSMWL 230
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2S6QAK3_9PROT (Dephospho-CoA kinase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QAK3_9PROT) HSP 1 Score: 303 bits (777), Expect = 1.540e-98 Identity = 161/224 (71.88%), Postives = 183/224 (81.70%), Query Frame = 1
Query: 1 MIVLGLSGSIGMGKSTASAMFCRMGVPVYDSDASVHVVLGKGGAAVVPIAAAFPGVVVEGAVDRDALGKRVFGDDAALKTLEAIVHPLVRRRQDGFLKRCAARRVPLAVLDIPLLFEVRLDVRCDVLVVVSAPARIQAARVLARPGMTREKFDGILARQMPDAEKRRRADFVVPSGRGKAETLRRLTRIARLARDMSPSHWPPDMFAERTVHRRSPDARNRPRY 672
MI++GL+GSIGMGKSTA++MF RM +PVYDSD +VH VLGKGG+AV I AFP VV++G VDR ALG RVFGD AA++ LE I+HPLVR+RQD FLKRC ARRV LAVLDIPLLFEV LDVRCD +VVSAPA IQ ARVLARPGMTREKFD I ARQ+PDA KRRRADFVVPSGRG+AETLR L RIA+L R + HWPP+++ ER V RRS R PRY
Sbjct: 1 MIIVGLTGSIGMGKSTAASMFRRMNIPVYDSDMAVHTVLGKGGSAVKSIEVAFPDVVIDGVVDRHALGDRVFGDSAAIEKLECIIHPLVRQRQDWFLKRCGARRVGLAVLDIPLLFEVGLDVRCDASIVVSAPASIQEARVLARPGMTREKFDDIKARQIPDAVKRRRADFVVPSGRGRAETLRHLLRIAKLMRKEAARHWPPNVYVERKVKRRSMHERANPRY 224
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Match: A0A2D9F1P2_9PROT (DNA polymerase III subunit epsilon n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F1P2_9PROT) HSP 1 Score: 303 bits (776), Expect = 1.960e-98 Identity = 158/232 (68.10%), Postives = 179/232 (77.16%), Query Frame = 2
Query: 650 MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPAGAFAVHGLSEEFLSGHPVFKDVVDDFLAFIGDDPLVIHNASFDMGFINAELRRLKRRELPMTQSVDTVRMARRKFPGAPASLDALCRRFDIDNSSRTYHGALLDAELLAEVYLELRGGRQPGLSLAA---AEAGAATKTSDQESEIPAPPAEIRPARPHAASAAELAAHEAFIATLKQPMW 1336
MRE+VLDTETTGLDP++G R+VEIGCVE+ NH+A+G TYHQYVNP+RDMPA AF VHGLSEEFLSGHPVF DV D F+ F+GD PLVIHNASFDMGFINAEL RLKR +PM+Q+VDTV MAR+KFPGA ASLDALC+RF IDN+ R HGALLD+ LLAEVYLEL GGRQP L LAA AEA A K +RP R HA A E AAH+AF+ L P+W
Sbjct: 1 MREVVLDTETTGLDPLSGHRIVEIGCVELVNHVASGRTYHQYVNPERDMPAEAFRVHGLSEEFLSGHPVFADVADAFVDFVGDAPLVIHNASFDMGFINAELARLKRPSIPMSQAVDTVSMARKKFPGAGASLDALCKRFQIDNTHRDLHGALLDSRLLAEVYLELIGGRQPDLELAAEIQAEAVAVEKV-------------VRPPRTHAPLAEEEAAHQAFLEKLNDPVW 219 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9956.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9956.2.1 >prot_D-mesarthrocarpus_Contig9956.2.1 ID=prot_D-mesarthrocarpus_Contig9956.2.1|Name=mRNA_D-mesarthrocarpus_Contig9956.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=238bp MREIVLDTETTGLDPINGDRLVEIGCVEVFNHIATGETYHQYVNPQRDMPback to top mRNA from alignment at D-mesarthrocarpus_Contig9956:1156..2518- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9956.2.1 ID=mRNA_D-mesarthrocarpus_Contig9956.2.1|Name=mRNA_D-mesarthrocarpus_Contig9956.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1363bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9956:1156..2518- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9956:1156..2518- >mRNA_D-mesarthrocarpus_Contig9956.2.1 ID=mRNA_D-mesarthrocarpus_Contig9956.2.1|Name=mRNA_D-mesarthrocarpus_Contig9956.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=714bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9956:1156..2518- (Discosporangium mesarthrocarpum MT17_79)back to top |