mRNA_D-mesarthrocarpus_Contig9947.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9947.1.1 vs. uniprot
Match: D8LES5_ECTSI (UVR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES5_ECTSI) HSP 1 Score: 240 bits (613), Expect = 5.930e-70 Identity = 116/233 (49.79%), Postives = 160/233 (68.67%), Query Frame = 1
Query: 67 LVTGARSTTKTKYRQLAEGPTLFYEYTKKSLHRPNMILHSGSRVYALDLKTGEETTISESSQPKFMVPATHVVGGKDAVLLIEGT-DEGGYHLVTALADGSKKKRLCPVNGYSTIQISPDQKRVALMQQDLPAQYFATKLLQGN-GALDPESMVPIEQLDVPLDRVIMGMFFSPDSKKLLFLVTKAKREELSVSRSSLKMGFHLEFQWIVYDCGKRTSTMYQSFIPRTFFVRV 759
LV A++ +TK R LA+G LFY YTKK +M++H+ +RVY LD+ TG+E IS + FM P+TH GG+DAV+L+E DE G HLV+ DGS KKR+CP G+ST +SPD +R+ LMQQD+ ++ +L+G GALDP S +EQ+++PLDRVIM FFSPDS KLL L TK + EL+V+RSS+++GF L+FQW++YDC R + F PR FF+++
Sbjct: 414 LVAAAKTPYRTKTRGLAQGNPLFYAYTKKDSRNADMVVHTANRVYHLDMTTGDEVDISTRAAQLFMAPSTHCEGGEDAVILVETDGDESGQHLVSGRVDGSAKKRICPTRGFSTFGVSPDGQRLCLMQQDMTTGFYTISVLEGGEGALDPLSTATMEQVEIPLDRVIMAFFFSPDSTKLLCLATKMSKSELAVARSSMRLGFQLKFQWVIYDCETRDVQLLDEFSPRPFFLKM 646
BLAST of mRNA_D-mesarthrocarpus_Contig9947.1.1 vs. uniprot
Match: A0A7S3XSM8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSM8_HETAK) HSP 1 Score: 159 bits (401), Expect = 1.930e-41 Identity = 98/272 (36.03%), Postives = 153/272 (56.25%), Query Frame = 1
Query: 1 PDSRTMSYLSKGDGASETLTDVLVTGARSTTKTKYRQLAEGPTLFYEYTKKSLHRP-NMILHSGSR--VYALDLKTGEETTISESSQPKFMVPATHVVGGKDAVLLIEGTDEGGYHLVTALADGS---------------KKKRLCPVNGYSTIQISPDQKRVALMQQDLPAQYFATKLLQGNG-ALDPESMVPIEQLDVPLDRVIMGMFFSPDSKKLLFLVTKAKREELSVSRSSLKMGFHLEFQWIVYDCGKRTSTMYQSFIPRTFFVRV 759
PDS+T+++L++G + + V T R R + +G LF+ + P ++H+GS+ V +D +TG + +S FM PA H GG+++VL++EG HL + ADG KKRL V G+ST +SPD+++VALMQQDL ++ KL++ +G ALDP S P+ Q D+P+ +++ F+SPDS KLL L T R EL+++R++LK G++L+ +W V D T Y F PRTF+++V
Sbjct: 101 PDSKTLTFLAQGADGNVQMVSVDTT--REAAAGGARLVDKGTPLFFATAAAAEGEPLRYLVHNGSKRTVTRVDPRTGASELVCLTSGSMFMAPAAHRRGGRESVLVVEGG-----HLTSMTADGRGRGXXXXXXXXXXDPAKKRLVHVKGFSTFLLSPDEQKVALMQQDLITGAYSVKLVRADGDALDPTSDAPVSQEDLPIGNILLAYFWSPDSTKLLCLSTNFGRNELALARNALKQGYNLKCRWKVVDVDTGKVTNYPEFTPRTFYIKV 365
BLAST of mRNA_D-mesarthrocarpus_Contig9947.1.1 vs. uniprot
Match: A0A6H5KL47_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL47_9PHAE) HSP 1 Score: 154 bits (388), Expect = 9.280e-38 Identity = 78/144 (54.17%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 190 SRVYALDLKTGEETTISESSQPKFMVPATHVVGGKDAVLLIEGT-DEGGYHLVTALADGSKKKRLCPVNGYSTIQISPDQKRVALMQQDLPAQYFATKLLQGN-GALDPESMVPIEQLDVPLDRVIMGMFFSPDSKKLLFLVTK 615
S VY LD+ TG+E IS + FM P+TH GG+DAV+L+E DE G HLV+A DGS KKR+CP G+ST +SPD +R+ LMQQD+ ++ +L+G GALDP S +EQ+++PLDRVIM FFSPDS KLL L TK
Sbjct: 865 SWVYHLDMTTGDEVDISTRAAQLFMAPSTHCEGGEDAVILVETDGDESGQHLVSARVDGSAKKRICPTRGFSTFGVSPDGQRLCLMQQDMTTGFYTISVLEGGEGALDPLSTATMEQVEIPLDRVIMAFFFSPDSTKLLCLATK 1008
BLAST of mRNA_D-mesarthrocarpus_Contig9947.1.1 vs. uniprot
Match: W7TQD5_9STRA (Acylaminoacyl peptidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQD5_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.690e-23 Identity = 66/226 (29.20%), Postives = 115/226 (50.88%), Query Frame = 1
Query: 106 RQLAEGPTLFYEYTKKSLHRPNMILHSGSR--VY------ALDLKTGEETTISESSQPKFMVPATHVVGGKDAVLLIEGTDEGGYHLVTALADGSKKKRLCPVNGYSTIQISPDQKRVALMQQDLPAQYFATKLLQGNGALDPESMVPIEQLDVPLDRVIMGMFFSPDSKKLLFLVTKAKREELSVSRSSLKMGFHLEFQWIVYDCGKRTSTMYQSFIPRTFFVRV 759
R + EG LF+ +K + R ++++++G R +Y L K ++ E KF P G +D+V+ + +LV A DG +K +C V G+ T+ +SP+ K +ALM++D ++ ++ G A +P Q +P++ V+ +FSPDS+KLL +VT + E SV+R+++ +G L +W VY G Y F PR + ++
Sbjct: 408 RVIDEGMPLFFATSKYNSDRYSLVMNNGKRNGLYRYLGDMTLPRKAWKQLATHER---KFRSPEVASTGLQDSVIFVMDN-----YLVAASVDGRYRKNICRVQGFCTLAVSPNGKHIALMEEDGATGFYKMSIISGRDATNPYGGTAYVQKTLPINNVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDVYMLGSGEVRSYGMFNPRPYQLKA 625
BLAST of mRNA_D-mesarthrocarpus_Contig9947.1.1 vs. uniprot
Match: A0A0G4GZS2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GZS2_VITBC) HSP 1 Score: 73.9 bits (180), Expect = 9.750e-11 Identity = 54/189 (28.57%), Postives = 91/189 (48.15%), Query Frame = 1
Query: 106 RQLAEGPTLFYEYTKKSLHRPNMILHS--GSRVYALDLK----TGEETTISESSQP----KFMVPATHVVGGKDAVLLIEGTDEGGYHLVTALADGSKKKRLCPVNGYSTIQISPDQKRVALMQQDLPAQYFATKLLQG-NGALDPESM-VPIEQLDVPLDRVIMGMFFSPDSKKLLFLVTKAKREELS 636
R L +G LF+ +K P +I+++ R+ L + +GE S + P KF P H G D ++ +E L++ DG +KR+ P++ +Q+SPD +RVAL++Q + +++G + LDP + + D+P+ + +FSPDSKKLL T + LS
Sbjct: 352 RTLDKGRPLFFASSKLDRRHPKLIVNNWLAGRLRVLKDEGKWASGEGRWESLTDGPGKIAKFAAPKAHTAGNMDGIVAVEND-----WLISVSLDGKHRKRIMPISSSVAMQVSPDNQRVALLEQQTGS--CRVIVIEGEHDWLDPRNPDAKVSSFDLPIGHITAAFWFSPDSKKLLCFSTNLSKPALS 533 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9947.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9947.1.1 >prot_D-mesarthrocarpus_Contig9947.1.1 ID=prot_D-mesarthrocarpus_Contig9947.1.1|Name=mRNA_D-mesarthrocarpus_Contig9947.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=263bp MSYLSKGDGASETLTDVLVTGARSTTKTKYRQLAEGPTLFYEYTKKSLHRback to top mRNA from alignment at D-mesarthrocarpus_Contig9947:2..4458+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9947.1.1 ID=mRNA_D-mesarthrocarpus_Contig9947.1.1|Name=mRNA_D-mesarthrocarpus_Contig9947.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4457bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9947:2..4458+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9947:2..4458+ >mRNA_D-mesarthrocarpus_Contig9947.1.1 ID=mRNA_D-mesarthrocarpus_Contig9947.1.1|Name=mRNA_D-mesarthrocarpus_Contig9947.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=789bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9947:2..4458+ (Discosporangium mesarthrocarpum MT17_79)back to top |