mRNA_D-mesarthrocarpus_Contig9937.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9937.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9937.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A7S0N887_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N887_9CHLO)

HSP 1 Score: 127 bits (320), Expect = 3.300e-33
Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALKLDSLAQWLEELCGGRACPMMLNTEEQDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK 276
            LP  P  PG+I  +LD L+L+ LA +LE   GGR CPMM   E+ DPF+L VHHRHSFW +DP+ P+ +LL+P+GFPAH HRGF+TVTYML 
Sbjct:   96 LPVWPVVPGVIFIILDLLRLNELAAFLEHRFGGRVCPMMFTPEQTDPFVLCVHHRHSFWWWDPVRPIFRLLLPEGFPAHPHRGFETVTYMLS 187          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A7S0H265_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H265_9EUKA)

HSP 1 Score: 112 bits (280), Expect = 8.110e-28
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALKLDSLAQWLEELCGGRACPMMLNTEEQDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK 276
            LP  P   GL L +LDAL    LA+ LE+  GGR  PM+L+  + +PF+L+VHHRHSF  FDPI PL  L+IP+GFPAH HRGF+T+TY+LK
Sbjct:   71 LPVWPVTNGLGLLLLDALGQKGLARKLEDRIGGRVSPMILDYSDTNPFVLLVHHRHSFTKFDPIRPLSNLVIPEGFPAHPHRGFETITYVLK 162          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: D8LHH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH3_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 5.920e-26
Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALKLDSLAQWLEELCGGRACPMML-NTEEQDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK 276
            LP  P   GLI   LD L+L  LA  LE+L GGR   +   N  E DPFI++VHHRH+FWP DP  P+  + +P+GFPAH HRGFQTVTY+++
Sbjct:  123 LPAWPVQNGLIYTALDFLRLRKLALHLEDLWGGRVGVLQPPNQVESDPFIMLVHHRHTFWPLDPFRPISNMFVPEGFPAHPHRGFQTVTYVMR 215          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A7S0L8C7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8C7_9EUKA)

HSP 1 Score: 102 bits (253), Expect = 4.630e-25
Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDAL-KLDSLAQWLEELCGGRACPMMLNTEEQDPFILMVHHRHSFWPFDPISPLVK-LLIPDGFPAHGHRGFQTVTYML 273
            LP  P   GL+L VL  L  L S+A  LE+  GGR CPM  +  + DPFIL+VHHRH+F P D   PL   L++P+GFPAH HRGF+TVTY+L
Sbjct:   26 LPVWPAWQGLVLGVLSQLGPLRSVADSLEDAFGGRVCPMQFDPVQSDPFILLVHHRHAFRPLDFFRPLFSSLILPEGFPAHPHRGFETVTYVL 118          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A812J990_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812J990_9DINO)

HSP 1 Score: 105 bits (263), Expect = 1.350e-24
Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALKLDSLAQWLEELCGGRACPMMLNTEE-QDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK 276
            LP  P   GL+  +LD L    +  WLE+  GGR CPM+L  +   DPF+L+ HHRHSF  FDP   L +LL+P+GFPAH HRGF+TVTY+L+
Sbjct:   64 LPVWPAWFGLVYILLDLLGKPKVGAWLEDRFGGRVCPMVLRDKAASDPFLLVAHHRHSFNAFDPFRHLFRLLLPEGFPAHPHRGFETVTYVLR 156          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A8J5XSZ4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSZ4_DIALT)

HSP 1 Score: 100 bits (249), Expect = 2.450e-23
Identity = 48/88 (54.55%), Postives = 58/88 (65.91%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALKLDSLAQWLEELCGGRACPMMLNTEEQDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVT 264
            LP  P   GL L  LD + L   A   E   GGR  PM L  E+ DPF+L+VHHRH F  +DP+ PL++LLIP+GFPAH HRGF+TVT
Sbjct:    7 LPFWPLANGLALTALDLVGLRDAAADAEAAIGGRVAPMSLGGEDADPFVLLVHHRHRFSAWDPLRPLLRLLIPEGFPAHPHRGFETVT 94          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A812K4J3_9DINO (Hypothetical protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812K4J3_9DINO)

HSP 1 Score: 100 bits (249), Expect = 5.640e-23
Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALK-LDSLAQWLEELCGGRACPMML-NTEEQDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK 276
            LP  P   G++  +LD L    S+  WLE+  GGR CPM+  +T   DPF+L+ HHRHSF  FDP   L + L+P+GFPAH HRGF+TVTY+L+
Sbjct:   69 LPVWPAWFGIVYILLDLLLGRPSVGAWLEDRFGGRVCPMIFRDTAASDPFLLVAHHRHSFNAFDPFRYLFRFLLPEGFPAHPHRGFETVTYVLR 162          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A7V8YDJ5_9DELT (Pirin family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V8YDJ5_9DELT)

HSP 1 Score: 99.0 bits (245), Expect = 8.950e-23
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALKLDSLAQWLEELCGGRACPMMLNTEEQDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK 276
            LP  P   GL+    + + L  +A+ LE+  GGR  PM L  E  DPF+L+VHHRH+F  +DPI PL  L++P+GFPAH HRGF+TVT++L+
Sbjct:   17 LPVWPVGSGLLSWASERVGLPGVARALEKRWGGRVTPMQLPVEASDPFLLVVHHRHTFSAWDPIRPLSALVMPEGFPAHPHRGFETVTFVLE 108          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A1Q9DQN6_SYMMI (Putative ubiquitin-like-specific protease 1B n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DQN6_SYMMI)

HSP 1 Score: 100 bits (249), Expect = 1.070e-22
Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALK-LDSLAQWLEELCGGRACPMML-NTEEQDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK 276
            LP  P   G++  +LD L    S+  WLE+  GGR CPM+  +T   DPF+L+ HHRHSF  FDP   L + L+P+GFPAH HRGF+TVTY+L+
Sbjct:  295 LPVWPAWFGIVYILLDLLLGKPSVGAWLEDRFGGRVCPMIFRDTAASDPFLLVAHHRHSFNAFDPFRYLFRFLLPEGFPAHPHRGFETVTYVLR 388          
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Match: A0A813BIS6_SYMMI (ULP1B protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BIS6_SYMMI)

HSP 1 Score: 100 bits (249), Expect = 1.080e-22
Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 1
Query:    1 LPPTPKHPGLILAVLDALK-LDSLAQWLEELCGGRACPMML-NTEEQDPFILMVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK 276
            LP  P   G++  +LD L    S+  WLE+  GGR CPM+  +T   DPF+L+ HHRHSF  FDP   L + L+P+GFPAH HRGF+TVTY+L+
Sbjct: 1270 LPVWPAWFGIVYILLDLLLGKPSVGAWLEDRFGGRVCPMIFRDTAASDPFLLVAHHRHSFNAFDPFRYLFRFLLPEGFPAHPHRGFETVTYVLR 1363          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9937.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0N887_9CHLO3.300e-3359.78Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S0H265_9EUKA8.110e-2857.61Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
D8LHH3_ECTSI5.920e-2653.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0L8C7_9EUKA4.630e-2554.84Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A812J990_9DINO1.350e-2452.69Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A8J5XSZ4_DIALT2.450e-2354.55Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A812K4J3_9DINO5.640e-2351.06Hypothetical protein n=2 Tax=unclassified Symbiodi... [more]
A0A7V8YDJ5_9DELT8.950e-2350.00Pirin family protein n=1 Tax=Deltaproteobacteria b... [more]
A0A1Q9DQN6_SYMMI1.070e-2251.06Putative ubiquitin-like-specific protease 1B n=2 T... [more]
A0A813BIS6_SYMMI1.080e-2251.06ULP1B protein n=2 Tax=Symbiodinium TaxID=2949 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9937contigD-mesarthrocarpus_Contig9937:91..366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LHH3
PFAMsPirin,Pirin_C
Model size276
Max annot lvl2759|Eukaryota
KEGG koko:K06911
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.71e-27
EggNOG OGsCOG1741@1|root,2QQ5A@2759|Eukaryota
Ec32 ortholog descriptionPirin
Ec32 orthologEc-11_004080.1
Descriptionquercetin 2,3-dioxygenase activity
Cds size276
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791143.7068162-CDS-D-mesarthrocarpus_Contig9937:90..3661680791143.7068162-CDS-D-mesarthrocarpus_Contig9937:90..366Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9937 91..366 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9937.1.1prot_D-mesarthrocarpus_Contig9937.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9937 91..366 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9937.1.1

>prot_D-mesarthrocarpus_Contig9937.1.1 ID=prot_D-mesarthrocarpus_Contig9937.1.1|Name=mRNA_D-mesarthrocarpus_Contig9937.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=92bp
LPPTPKHPGLILAVLDALKLDSLAQWLEELCGGRACPMMLNTEEQDPFIL
MVHHRHSFWPFDPISPLVKLLIPDGFPAHGHRGFQTVTYMLK
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mRNA from alignment at D-mesarthrocarpus_Contig9937:91..366-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9937.1.1 ID=mRNA_D-mesarthrocarpus_Contig9937.1.1|Name=mRNA_D-mesarthrocarpus_Contig9937.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=276bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9937:91..366- (Discosporangium mesarthrocarpum MT17_79)
CTGCCCCCCACCCCCAAACACCCAGGGCTCATACTCGCTGTCCTGGATGC CCTGAAGCTGGATTCCCTGGCCCAGTGGCTGGAGGAGCTCTGTGGTGGGC GGGCGTGCCCAATGATGCTCAACACGGAGGAGCAGGACCCCTTCATCCTC ATGGTTCACCACCGCCACTCCTTCTGGCCGTTCGACCCCATCAGCCCCCT CGTGAAGCTCCTCATCCCAGATGGGTTCCCAGCCCACGGCCACCGCGGCT TCCAAACAGTAACGTACATGCTCAAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9937:91..366-

>mRNA_D-mesarthrocarpus_Contig9937.1.1 ID=mRNA_D-mesarthrocarpus_Contig9937.1.1|Name=mRNA_D-mesarthrocarpus_Contig9937.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=276bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9937:91..366- (Discosporangium mesarthrocarpum MT17_79)
CTGCCCCCCACCCCCAAACACCCAGGGCTCATACTCGCTGTCCTGGATGC
CCTGAAGCTGGATTCCCTGGCCCAGTGGCTGGAGGAGCTCTGTGGTGGGC
GGGCGTGCCCAATGATGCTCAACACGGAGGAGCAGGACCCCTTCATCCTC
ATGGTTCACCACCGCCACTCCTTCTGGCCGTTCGACCCCATCAGCCCCCT
CGTGAAGCTCCTCATCCCAGATGGGTTCCCAGCCCACGGCCACCGCGGCT
TCCAAACAGTAACGTACATGCTCAAG
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