mRNA_D-mesarthrocarpus_Contig9934.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9934.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9934.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: A0A6H5JAN0_9PHAE (NYD-SP28 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAN0_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.940e-24
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 1 
Query:   13 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSALVQ 183
            TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMEN ATL+HQKRKLTKLKDALS LVQ
Sbjct:  296 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENSATLSHQKRKLTKLKDALSGLVQ 352
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: A0A835Z4S9_9STRA (Sperm tail-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S9_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.910e-23
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 1 
Query:   13 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSAL 177
            TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMEN ATL HQKRKLTKLKDALSAL
Sbjct:  271 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENSATLAHQKRKLTKLKDALSAL 325
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: F0WFE3_9STRA (Uncharacterized protein AlNc14C82G5332 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WFE3_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.930e-18
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 1 
Query:   13 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSAL 177
            TLEQQLE+MRA YQLNTEKLEYNYRVLTERDMEN ATL+  KRKLT+ KD LS L
Sbjct:  281 TLEQQLEDMRAAYQLNTEKLEYNYRVLTERDMENSATLSQLKRKLTRFKDTLSTL 335
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: A0A7S3XMC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMC1_HETAK)

HSP 1 Score: 84.7 bits (208), Expect = 6.270e-18
Identity = 44/56 (78.57%), Postives = 50/56 (89.29%), Query Frame = 1 
Query:   13 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSALV 180
            TL++QLEEMRATYQLNTEKLEYN+RVLTERD EN +TL  QKR+  +LKDALSALV
Sbjct:  186 TLQEQLEEMRATYQLNTEKLEYNFRVLTERDNENKSTLAQQKRRQNRLKDALSALV 241
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: A0A024FY05_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FY05_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 9.150e-18
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 1 
Query:   13 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSAL 177
            TLEQQLE+MRA YQLNTEKLEYNYRVLTERDMEN ATL+  KRKLT+ K+ LS L
Sbjct:  282 TLEQQLEDMRAAYQLNTEKLEYNYRVLTERDMENSATLSQLKRKLTRFKETLSLL 336
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: R1FCG6_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FCG6_EMIHU)

HSP 1 Score: 82.8 bits (203), Expect = 5.910e-17
Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 1 
Query:   13 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSAL 177
            TLE+QLEEMRATYQLN EKL+YNYRVL ERD EN  T+ HQKRKLT++ D LSAL
Sbjct:  230 TLEKQLEEMRATYQLNQEKLDYNYRVLVERDTENTTTIKHQKRKLTRMADVLSAL 284
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: A0A7S3WX96_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WX96_9SPIT)

HSP 1 Score: 80.1 bits (196), Expect = 5.230e-16
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:   13 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSAL 177
            TLEQQLEEMRATYQLN EKL+YNYRVL ERD EN  T+  QK+KLT++ D LSAL
Sbjct:  195 TLEQQLEEMRATYQLNQEKLDYNYRVLVERDAENANTIKQQKKKLTRMTDVLSAL 249
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: A0A6A0A053_HAELA (Uncharacterized protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A053_HAELA)

HSP 1 Score: 75.5 bits (184), Expect = 1.130e-15
Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 1 
Query:   16 LEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSAL 177
            LEQ LE MRATYQLNTEKLEYNYRVL ERD EN AT+  QKRK+++ +D LS L
Sbjct:   55 LEQHLEAMRATYQLNTEKLEYNYRVLVERDHENQATINQQKRKISRQRDILSGL 108
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: A0A7S0NBA1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0NBA1_9CRYP)

HSP 1 Score: 78.6 bits (192), Expect = 1.540e-15
Identity = 41/59 (69.49%), Postives = 50/59 (84.75%), Query Frame = 1 
Query:   16 LEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSALVQVEG 192
            LEQQLE MR+TYQLNTEKLEYN+RVL+ERD EN +T+  QKRKL +L+D+LS+LV   G
Sbjct:  286 LEQQLEVMRSTYQLNTEKLEYNFRVLSERDSENTSTIGQQKRKLARLQDSLSSLVAKYG 344
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BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Match: A0A7S3F3U7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F3U7_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 2.090e-15
Identity = 41/57 (71.93%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:   13 TLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLTKLKDALSALVQ 183
            TLEQQLEEMRATYQLN EKL+YNYRVL ERD EN  T+  QK+KLT++ D LS+L Q
Sbjct:   23 TLEQQLEEMRATYQLNQEKLDYNYRVLVERDSENTNTIKTQKKKLTRMADMLSSLKQ 79
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9934.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAN0_9PHAE2.940e-2494.74NYD-SP28 domain-containing protein n=2 Tax=Ectocar... [more]
A0A835Z4S9_9STRA1.910e-2396.36Sperm tail-domain-containing protein n=1 Tax=Tribo... [more]
F0WFE3_9STRA1.930e-1881.82Uncharacterized protein AlNc14C82G5332 n=1 Tax=Alb... [more]
A0A7S3XMC1_HETAK6.270e-1878.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A024FY05_9STRA9.150e-1880.00Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
R1FCG6_EMIHU5.910e-1776.36Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S3WX96_9SPIT5.230e-1674.55Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A6A0A053_HAELA1.130e-1572.22Uncharacterized protein (Fragment) n=1 Tax=Haemato... [more]
A0A7S0NBA1_9CRYP1.540e-1569.49Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S3F3U7_9EUKA2.090e-1571.93Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9934contigD-mesarthrocarpus_Contig9934:149..346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LIH6
Preferred nameDRC1
PFAMsNYD-SP28,NYD-SP28_assoc
Model size198
Max annot lvl2759|Eukaryota
KEGG koko:K19754
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007275,GO:0007368,GO:0007389,GO:0007507,GO:0008150,GO:0009799,GO:0009855,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032501,GO:0032502,GO:0032838,GO:0034622,GO:0035082,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0048513,GO:0048731,GO:0048856,GO:0048870,GO:0051179,GO:0051674,GO:0060271,GO:0060285,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0072359,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
Exons1
Evalue4.82e-25
EggNOG OGs2CMDT@1|root,2QQ2B@2759|Eukaryota
Descriptioncilium-dependent cell motility
Cds size198
COG categoryS
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791143.432741-CDS-D-mesarthrocarpus_Contig9934:148..3461680791143.432741-CDS-D-mesarthrocarpus_Contig9934:148..346Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9934 149..346 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9934.1.1prot_D-mesarthrocarpus_Contig9934.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9934 149..346 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9934.1.1

>prot_D-mesarthrocarpus_Contig9934.1.1 ID=prot_D-mesarthrocarpus_Contig9934.1.1|Name=mRNA_D-mesarthrocarpus_Contig9934.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=66bp
TREKTLEQQLEEMRATYQLNTEKLEYNYRVLTERDMENGATLTHQKRKLT
KLKDALSALVQVEGG*
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mRNA from alignment at D-mesarthrocarpus_Contig9934:149..346+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9934.1.1 ID=mRNA_D-mesarthrocarpus_Contig9934.1.1|Name=mRNA_D-mesarthrocarpus_Contig9934.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9934:149..346+ (Discosporangium mesarthrocarpum MT17_79)
ACCCGAGAGAAGACCCTGGAGCAGCAGTTGGAGGAGATGCGTGCCACATA
CCAGCTGAACACGGAAAAGCTGGAGTACAACTACCGGGTGCTGACTGAGA
GGGACATGGAGAATGGCGCCACCCTCACCCACCAGAAGAGGAAGCTCACC
AAACTCAAAGACGCCCTCTCTGCCCTCGTGCAGGTTGAAGGGGGTTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9934:149..346+

>mRNA_D-mesarthrocarpus_Contig9934.1.1 ID=mRNA_D-mesarthrocarpus_Contig9934.1.1|Name=mRNA_D-mesarthrocarpus_Contig9934.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9934:149..346+ (Discosporangium mesarthrocarpum MT17_79)
ACCCGAGAGAAGACCCTGGAGCAGCAGTTGGAGGAGATGCGTGCCACATA
CCAGCTGAACACGGAAAAGCTGGAGTACAACTACCGGGTGCTGACTGAGA
GGGACATGGAGAATGGCGCCACCCTCACCCACCAGAAGAGGAAGCTCACC
AAACTCAAAGACGCCCTCTCTGCCCTCGTGCAGGTTGAAGGGGGTTAG
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