mRNA_D-mesarthrocarpus_Contig9909.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9909.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9909.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9909.1.1 vs. uniprot
Match: A0A6H5L0M9_9PHAE (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M9_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 7.040e-6
Identity = 21/30 (70.00%), Postives = 27/30 (90.00%), Query Frame = 1 
Query:    1 QVFLERAKELADRLLPAFDSHTGVPYKMAS 90
            +VFLERAK+LADRLLPAF + TG+PYK+ +
Sbjct:  404 EVFLERAKDLADRLLPAFGTSTGIPYKLVN 433
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BLAST of mRNA_D-mesarthrocarpus_Contig9909.1.1 vs. uniprot
Match: D7FS40_ECTSI (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS40_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 1.320e-5
Identity = 20/30 (66.67%), Postives = 27/30 (90.00%), Query Frame = 1 
Query:    1 QVFLERAKELADRLLPAFDSHTGVPYKMAS 90
            +VFLERAK+LADRL+PAF + TG+PYK+ +
Sbjct:  402 EVFLERAKDLADRLMPAFGTSTGIPYKLVN 431
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BLAST of mRNA_D-mesarthrocarpus_Contig9909.1.1 vs. uniprot
Match: A0A200PYR4_9MAGN (Glycoside hydrolase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PYR4_9MAGN)

HSP 1 Score: 46.6 bits (109), Expect = 2.310e-5
Identity = 18/25 (72.00%), Postives = 25/25 (100.00%), Query Frame = 1 
Query:    4 VFLERAKELADRLLPAFDSHTGVPY 78
            VFLE+AK++ADRLLPA+D+H+G+PY
Sbjct:   63 VFLEKAKDIADRLLPAWDTHSGIPY 87
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9909.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0M9_9PHAE7.040e-670.00alpha-1,2-Mannosidase n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7FS40_ECTSI1.320e-566.67alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculos... [more]
A0A200PYR4_9MAGN2.310e-572.00Glycoside hydrolase n=1 Tax=Macleaya cordata TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9909contigD-mesarthrocarpus_Contig9909:274..378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FS40
Preferred nameMAN1A2
PFAMsGlyco_hydro_47
Model size105
Max annot lvl2759|Eukaryota
KEGG koko:K01230
KEGG ReactionR05982,R06722
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00073,M00074
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000139,GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0004571,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005793,GO:0005794,GO:0005802,GO:0005829,GO:0006464,GO:0006486,GO:0006487,GO:0006491,GO:0006508,GO:0006511,GO:0006517,GO:0006807,GO:0006950,GO:0007275,GO:0007568,GO:0007585,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0010498,GO:0012505,GO:0015923,GO:0015924,GO:0016020,GO:0016021,GO:0016787,GO:0016798,GO:0019538,GO:0019941,GO:0030163,GO:0030173,GO:0030323,GO:0030324,GO:0030433,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0033554,GO:0034645,GO:0034976,GO:0035010,GO:0035295,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0042221,GO:0042493,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0048286,GO:0048513,GO:0048731,GO:0048856,GO:0050896,GO:0051603,GO:0051716,GO:0060541,GO:0070085,GO:0071704,GO:0072347,GO:0097708,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1904381
Exons1
Evalue2.16e-06
EggNOG OGsKOG2204@1|root,KOG2204@2759|Eukaryota
EC3.2.1.113
Descriptionmannosyl-oligosaccharide 1,2-alpha-mannosidase activity
Cds size105
COG categoryG
CAZyGH47
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791141.3929877-CDS-D-mesarthrocarpus_Contig9909:273..3781680791141.3929877-CDS-D-mesarthrocarpus_Contig9909:273..378Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9909 274..378 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9909.1.1prot_D-mesarthrocarpus_Contig9909.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9909 274..378 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9909.1.1

>prot_D-mesarthrocarpus_Contig9909.1.1 ID=prot_D-mesarthrocarpus_Contig9909.1.1|Name=mRNA_D-mesarthrocarpus_Contig9909.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=35bp
QVFLERAKELADRLLPAFDSHTGVPYKMASWLYPR
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mRNA from alignment at D-mesarthrocarpus_Contig9909:274..378+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9909.1.1 ID=mRNA_D-mesarthrocarpus_Contig9909.1.1|Name=mRNA_D-mesarthrocarpus_Contig9909.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=105bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9909:274..378+ (Discosporangium mesarthrocarpum MT17_79)
CAGGTGTTCCTGGAGCGCGCTAAGGAGTTAGCGGACAGGCTTTTGCCTGC
ATTCGACAGCCACACTGGGGTCCCCTACAAGATGGCAAGTTGGCTGTACC
CCAGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9909:274..378+

>mRNA_D-mesarthrocarpus_Contig9909.1.1 ID=mRNA_D-mesarthrocarpus_Contig9909.1.1|Name=mRNA_D-mesarthrocarpus_Contig9909.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=105bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9909:274..378+ (Discosporangium mesarthrocarpum MT17_79)
CAGGTGTTCCTGGAGCGCGCTAAGGAGTTAGCGGACAGGCTTTTGCCTGC
ATTCGACAGCCACACTGGGGTCCCCTACAAGATGGCAAGTTGGCTGTACC
CCAGG
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