mRNA_D-mesarthrocarpus_Contig99.9.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig99.9.1
Unique NamemRNA_D-mesarthrocarpus_Contig99.9.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig99.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig99contigD-mesarthrocarpus_Contig99:44693..47321 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2130
Hectar predicted targeting categoryother localisation
Exons3
Cds size2130
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791139.910247-CDS-D-mesarthrocarpus_Contig99:44692..449561680791139.910247-CDS-D-mesarthrocarpus_Contig99:44692..44956Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig99 44693..44956 +
1680791139.9230947-CDS-D-mesarthrocarpus_Contig99:45175..453541680791139.9230947-CDS-D-mesarthrocarpus_Contig99:45175..45354Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig99 45176..45354 +
1680791139.932923-CDS-D-mesarthrocarpus_Contig99:45634..473211680791139.932923-CDS-D-mesarthrocarpus_Contig99:45634..47321Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig99 45635..47321 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig99.9.1prot_D-mesarthrocarpus_Contig99.9.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig99 44693..47321 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig99.9.1

>prot_D-mesarthrocarpus_Contig99.9.1 ID=prot_D-mesarthrocarpus_Contig99.9.1|Name=mRNA_D-mesarthrocarpus_Contig99.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=710bp
MRTPRQVADGIGRGGVRCRPVDMDPPDLQSRGVFSFADLGGYSGSSGADA
AVFASLSKRSTNEHVNDENAVPHSNMGAAKARHVFGSKSNGIVAASTPRK
SPKSGGGTAEHHLSTEETRLMLRKNQHLSIRNQQLEEIAAREATRADSLA
RDKVSLERALASARRETDKRISEVRAAVERETAVRAAAESRAQQAQKATD
LAVSMALAKAQAEATQKVSAAECAVEEETVARRAAEMRGADAELRVERAQ
VQAAEARAAAETLSSGLRALVAEVTGEASEASTMPAPVAGARGSTSEKGR
RGGAGAVREESQSPITVREDRLATFLAGFCKLYHTAVGGHLRPAELRYWL
LEHVDNSTAAFVAAARAFTPDATPTAPDPSPISLVAEVQPQAALDDGEVA
GSALNEAVGKLCALVRNGQSGRTSALLPDVAPDIGGGASLLTARSTGVRR
SPLRGAVWAVSKTTCGASASADPDPIPGAPLETVAKVAAGGTGEGGVSLS
SHGTVKTRRSRKHPQPSDAFTPKKPVNDGTNSPLTCLDRAPPPGASVLRG
SGCGESVASGAGSVVVAATVQRQGGERVHSGQGGCVGSNLPSGQEKGAMS
EATGIRRSGRRRRTLHKWGHEDMGVSCAAGTASGESSGVGAASAAGVEAA
SALDRAPGKNPADKEDCPAAVPSENDSRGVREACGGHTKGGAGVKVEPPL
TVGERKAAGK
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mRNA from alignment at D-mesarthrocarpus_Contig99:44693..47321+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig99.9.1 ID=mRNA_D-mesarthrocarpus_Contig99.9.1|Name=mRNA_D-mesarthrocarpus_Contig99.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2629bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig99:44693..47321+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGGACCCCGCGACAAGTTGCAGACGGGATTGGGCGCGGAGGGGTCCG
TTGCCGGCCTGTCGATATGGATCCCCCTGATCTACAAAGTAGGGGAGTGT
TCTCTTTTGCGGATCTTGGTGGATACTCTGGATCCAGTGGAGCAGATGCT
GCTGTCTTTGCTTCTCTTTCCAAGAGATCCACTAACGAGCATGTCAACGA
TGAGAATGCTGTTCCCCATAGCAACATGGGTGCGGCGAAAGCACGACATG
TTTTCGGAAGCAAGGTATGCCTAAAACTATGATTATCATTTTCCACTGAG
GGTTGATTCTTTGTTCGTCCAAAAGCTACTGTGACCCGTGCTGGGGCTGC
GAGGTGGAACATGCCCGGAAGACAGACCGCCGATATGCTCCTTCCTCTAT
GTACATGCCCTTTGCCAGTACTTCACCATTCTCAAGTTATTGATGATGTT
TATCAGATTCTCACCTGGTGTCCTTCCTCTCAGAGCAATGGCATTGTAGC
TGCTTCGACGCCCAGGAAATCCCCCAAGAGTGGCGGCGGCACCGCGGAGC
ATCACCTATCAACAGAAGAGACGCGCTTGATGTTGAGAAAGAACCAACAC
CTGAGCATCAGGAACCAACAGCTCGAAGAAATTGCTGCAAGGGAGGCCAC
ACGTGCAGACAGGTGGTGCAGCATATGCGTAGGCTCGTTTCTCGTGTCCA
CCCTCCACAACTTCGGCAACCAATCCCCTACGACCAGGCCCAGACCCACT
TTTTTGCACTCGCGCAAGTTCCAGTATCACCCTGTTGTCTGGGCTTTGGA
TGGGGTTGGTTCCCTGCCCTCGCATACTAACGTATTGTGCCATAGGAATG
ATAACATGAATTGACCCGAGTCATGTCACTCACTCCCCCACTTGTATCGG
GACCGACTGAATTCGAATGTCGCTGACCCCTTGCCGCCACAGTCTGGCTC
GGGACAAGGTTTCCTTGGAACGGGCGCTGGCTTCTGCTAGGAGGGAAACG
GATAAGCGGATATCTGAGGTGAGAGCTGCGGTAGAGAGGGAGACAGCAGT
CCGTGCTGCAGCGGAATCCAGGGCACAGCAAGCTCAAAAGGCTACTGATT
TGGCAGTGAGCATGGCGCTTGCCAAGGCCCAGGCGGAGGCTACCCAGAAA
GTCTCTGCAGCGGAATGCGCGGTCGAGGAAGAGACTGTGGCCAGAAGGGC
TGCTGAAATGCGGGGGGCTGATGCAGAGCTTCGTGTGGAGAGGGCACAAG
TCCAAGCTGCGGAGGCAAGGGCAGCTGCAGAGACTTTGTCATCCGGTCTG
AGGGCTCTTGTGGCAGAGGTGACGGGGGAGGCATCCGAAGCGTCTACAAT
GCCTGCCCCAGTGGCTGGAGCGAGAGGCAGCACGTCTGAGAAAGGGAGAC
GAGGAGGGGCAGGGGCCGTAAGGGAAGAGTCTCAATCCCCCATAACTGTG
AGAGAGGACCGGCTAGCAACTTTCCTTGCTGGGTTTTGTAAGCTGTACCA
CACTGCCGTAGGAGGGCATCTAAGACCGGCGGAGCTTCGTTATTGGCTTC
TTGAGCACGTGGACAACAGCACTGCCGCGTTTGTTGCTGCTGCTCGTGCT
TTCACGCCTGATGCCACCCCCACCGCTCCAGACCCTTCCCCCATCAGCCT
GGTAGCGGAAGTGCAACCCCAGGCTGCCCTGGATGATGGGGAAGTTGCTG
GGTCTGCCTTGAATGAAGCGGTGGGTAAGTTGTGTGCCCTGGTGAGGAAT
GGGCAATCGGGGAGGACTTCTGCGCTGCTTCCTGATGTTGCCCCCGATAT
CGGTGGGGGTGCCTCACTACTAACTGCTCGCAGCACGGGAGTGAGGAGGT
CTCCGCTCAGGGGTGCTGTCTGGGCTGTGTCCAAGACAACCTGTGGGGCC
TCCGCTTCCGCCGACCCTGACCCTATCCCCGGTGCTCCACTAGAGACTGT
GGCCAAGGTTGCTGCCGGGGGGACTGGAGAAGGAGGGGTTTCCTTGTCGA
GCCATGGCACTGTAAAGACAAGGCGCTCGAGAAAACACCCCCAACCCTCA
GATGCCTTCACCCCAAAAAAACCTGTGAATGATGGGACCAACTCACCCTT
GACTTGCTTGGACAGAGCCCCCCCCCCAGGTGCTTCAGTTCTCCGTGGGA
GCGGGTGTGGAGAGAGCGTTGCCAGCGGGGCTGGTAGTGTTGTCGTGGCG
GCAACGGTGCAGAGACAGGGTGGAGAAAGGGTCCACAGTGGCCAAGGTGG
CTGTGTGGGCAGCAATCTTCCCTCAGGGCAGGAGAAGGGAGCCATGAGTG
AAGCCACAGGCATCAGGCGATCGGGTAGGAGGAGGAGGACCCTGCACAAG
TGGGGCCATGAGGATATGGGGGTGTCATGCGCGGCTGGCACGGCAAGTGG
GGAGTCATCAGGGGTGGGGGCAGCCTCAGCTGCAGGGGTAGAGGCGGCGA
GTGCCTTGGATCGAGCCCCAGGGAAAAACCCTGCAGACAAGGAGGATTGC
CCTGCTGCGGTCCCCTCGGAGAATGACTCTCGTGGCGTGCGAGAAGCCTG
TGGTGGGCACACCAAGGGTGGGGCAGGTGTCAAGGTTGAGCCGCCTTTGA
CGGTAGGCGAAAGGAAGGCTGCTGGCAAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig99:44693..47321+

>mRNA_D-mesarthrocarpus_Contig99.9.1 ID=mRNA_D-mesarthrocarpus_Contig99.9.1|Name=mRNA_D-mesarthrocarpus_Contig99.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2130bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig99:44693..47321+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGGACCCCGCGACAAGTTGCAGACGGGATTGGGCGCGGAGGGGTCCG
TTGCCGGCCTGTCGATATGGATCCCCCTGATCTACAAAGTAGGGGAGTGT
TCTCTTTTGCGGATCTTGGTGGATACTCTGGATCCAGTGGAGCAGATGCT
GCTGTCTTTGCTTCTCTTTCCAAGAGATCCACTAACGAGCATGTCAACGA
TGAGAATGCTGTTCCCCATAGCAACATGGGTGCGGCGAAAGCACGACATG
TTTTCGGAAGCAAGAGCAATGGCATTGTAGCTGCTTCGACGCCCAGGAAA
TCCCCCAAGAGTGGCGGCGGCACCGCGGAGCATCACCTATCAACAGAAGA
GACGCGCTTGATGTTGAGAAAGAACCAACACCTGAGCATCAGGAACCAAC
AGCTCGAAGAAATTGCTGCAAGGGAGGCCACACGTGCAGACAGTCTGGCT
CGGGACAAGGTTTCCTTGGAACGGGCGCTGGCTTCTGCTAGGAGGGAAAC
GGATAAGCGGATATCTGAGGTGAGAGCTGCGGTAGAGAGGGAGACAGCAG
TCCGTGCTGCAGCGGAATCCAGGGCACAGCAAGCTCAAAAGGCTACTGAT
TTGGCAGTGAGCATGGCGCTTGCCAAGGCCCAGGCGGAGGCTACCCAGAA
AGTCTCTGCAGCGGAATGCGCGGTCGAGGAAGAGACTGTGGCCAGAAGGG
CTGCTGAAATGCGGGGGGCTGATGCAGAGCTTCGTGTGGAGAGGGCACAA
GTCCAAGCTGCGGAGGCAAGGGCAGCTGCAGAGACTTTGTCATCCGGTCT
GAGGGCTCTTGTGGCAGAGGTGACGGGGGAGGCATCCGAAGCGTCTACAA
TGCCTGCCCCAGTGGCTGGAGCGAGAGGCAGCACGTCTGAGAAAGGGAGA
CGAGGAGGGGCAGGGGCCGTAAGGGAAGAGTCTCAATCCCCCATAACTGT
GAGAGAGGACCGGCTAGCAACTTTCCTTGCTGGGTTTTGTAAGCTGTACC
ACACTGCCGTAGGAGGGCATCTAAGACCGGCGGAGCTTCGTTATTGGCTT
CTTGAGCACGTGGACAACAGCACTGCCGCGTTTGTTGCTGCTGCTCGTGC
TTTCACGCCTGATGCCACCCCCACCGCTCCAGACCCTTCCCCCATCAGCC
TGGTAGCGGAAGTGCAACCCCAGGCTGCCCTGGATGATGGGGAAGTTGCT
GGGTCTGCCTTGAATGAAGCGGTGGGTAAGTTGTGTGCCCTGGTGAGGAA
TGGGCAATCGGGGAGGACTTCTGCGCTGCTTCCTGATGTTGCCCCCGATA
TCGGTGGGGGTGCCTCACTACTAACTGCTCGCAGCACGGGAGTGAGGAGG
TCTCCGCTCAGGGGTGCTGTCTGGGCTGTGTCCAAGACAACCTGTGGGGC
CTCCGCTTCCGCCGACCCTGACCCTATCCCCGGTGCTCCACTAGAGACTG
TGGCCAAGGTTGCTGCCGGGGGGACTGGAGAAGGAGGGGTTTCCTTGTCG
AGCCATGGCACTGTAAAGACAAGGCGCTCGAGAAAACACCCCCAACCCTC
AGATGCCTTCACCCCAAAAAAACCTGTGAATGATGGGACCAACTCACCCT
TGACTTGCTTGGACAGAGCCCCCCCCCCAGGTGCTTCAGTTCTCCGTGGG
AGCGGGTGTGGAGAGAGCGTTGCCAGCGGGGCTGGTAGTGTTGTCGTGGC
GGCAACGGTGCAGAGACAGGGTGGAGAAAGGGTCCACAGTGGCCAAGGTG
GCTGTGTGGGCAGCAATCTTCCCTCAGGGCAGGAGAAGGGAGCCATGAGT
GAAGCCACAGGCATCAGGCGATCGGGTAGGAGGAGGAGGACCCTGCACAA
GTGGGGCCATGAGGATATGGGGGTGTCATGCGCGGCTGGCACGGCAAGTG
GGGAGTCATCAGGGGTGGGGGCAGCCTCAGCTGCAGGGGTAGAGGCGGCG
AGTGCCTTGGATCGAGCCCCAGGGAAAAACCCTGCAGACAAGGAGGATTG
CCCTGCTGCGGTCCCCTCGGAGAATGACTCTCGTGGCGTGCGAGAAGCCT
GTGGTGGGCACACCAAGGGTGGGGCAGGTGTCAAGGTTGAGCCGCCTTTG
ACGGTAGGCGAAAGGAAGGCTGCTGGCAAA
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