mRNA_D-mesarthrocarpus_Contig9879.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9879.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9879.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: D7G358_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G358_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.780e-42
Identity = 79/109 (72.48%), Postives = 90/109 (82.57%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQWG 327
            Q+RLK  CKPTVHEMMFFMN WAL  LS  A +SGQ  +GYAFCSAN +VM  V+GFSLAAA GQNFIY+TIS FNPLVCTTITTTRKFFTI+ SV+++GH+I   QWG
Sbjct:  199 QERLKAACKPTVHEMMFFMNAWALAILSAAAYLSGQAVEGYAFCSANPSVMSYVLGFSLAAAFGQNFIYYTISNFNPLVCTTITTTRKFFTIVCSVIIFGHAIGPKQWG 307          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: D7G364_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G364_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 6.200e-36
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQWG 327
            Q+RLK  CKPTV+EMMF+ N WALGFLS  A  SGQ   G  FC+ N  V G VV FSLAAA GQ FIY+TI+ FNPL C TITTTRKFFTI+FSV+ +GHSIS  QWG
Sbjct:  181 QERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWMKGSLFCADNPLVTGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHSISLKQWG 289          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A6H5JQ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ56_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 7.600e-36
Identity = 71/109 (65.14%), Postives = 81/109 (74.31%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQWG 327
            Q+RLK  CKPT +EMMF+ N WALGFLS  A  SGQ   G  FC+ N  VMG VV FSL AA GQ FIY+TI+ F+PL C TITTTRKFFTI+FSV+ +GHSIS  QWG
Sbjct:   70 QERLKTICKPTAYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLTAACGQFFIYYTITTFSPLACATITTTRKFFTIVFSVITFGHSISLKQWG 178          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A835ZCP5_9STRA (UAA transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.530e-34
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324
            QD +K+  K TVHEMMF+MN WAL  L+ +AV++GQ   GYAFC  N AV+ D+ GF+L AA+GQNFIYFTIS F+ LVCTTITTTRKFFTILFSV+ +GH +S  QW
Sbjct:  210 QDNIKRAHKHTVHEMMFWMNAWALVVLTPMAVLTGQAAGGYAFCQENPAVLRDLFGFALTAALGQNFIYFTISHFSSLVCTTITTTRKFFTILFSVLFFGHPMSPKQW 317          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A5D6XRA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA2_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.150e-28
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324
            Q+ + Q  +P+VH+ MF+ NLWA+ +    A+ +GQG  G AFC+ N A++  V  FS+ +A+GQNFIYFTI  F+ L CTTITTTRKFFTILFSVV YGH +S   W
Sbjct:  182 QEEIAQTLRPSVHQQMFYTNLWAVIYTGAGALATGQGLAGLAFCAENPAILSSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSATSW 289          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A2D4BZF8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF8_PYTIN)

HSP 1 Score: 125 bits (313), Expect = 3.100e-28
Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324
            Q+ + Q  +PTVH+ MF+ NLWA+ +    A+V+GQ   G+ FC  N A++  V  FS+ +A GQNFIYFTI  F+ L CTTITTTRKFFTILFSVV YGHS++   W
Sbjct:  200 QEEISQTLRPTVHQQMFYTNLWAVLYTGAGALVTGQAVSGFQFCVENPAILNSVFYFSICSAXGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHSLTAMSW 307          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: K3X0M7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0M7_GLOUD)

HSP 1 Score: 122 bits (307), Expect = 1.670e-27
Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324
            Q+ + Q  +P+VH+ MF+ NLWA+ +    A+++GQ   G+ FC  N A++  V  FS+ +A+GQNFIYFTI  F+ L CTTITTTRKFFTILFSVV YGH +S   W
Sbjct:  189 QEEISQTLRPSVHQQMFYTNLWAVIYTGAGALLTGQAFSGFFFCVENPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHQLSAMSW 296          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A6V2XTI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XTI4_HETAK)

HSP 1 Score: 124 bits (310), Expect = 1.850e-27
Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324
            Q +LK++ KPTVHE+MFF N+WA+  L++  + +GQ   G  +  AN  +   +  FS  +A+GQNFI+FT+SAF+PLVCTTITTTRKFFT+LFSV  +GH ++T  W
Sbjct:  227 QSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHW 334          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A0P1AG43_PLAHL (Solute carrier family 35 member b1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AG43_PLAHL)

HSP 1 Score: 119 bits (299), Expect = 2.120e-26
Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324
            Q+ +  + +P+VH+ MF  N+WA+ +  + A+V+GQ  +G  FC  N A++  V  FS+ +A+GQNFIYFTI  F+ L CTTITTTRKFFTILFSVV YGH +S   W
Sbjct:  191 QEEIAHQLRPSVHQQMFNTNIWAVVYTGIGALVTGQALEGLYFCINNPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSW 298          
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A6A3HCE6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HCE6_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.980e-26
Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 1
Query:    1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324
            Q+ +  + +P+VH+ M   NLWA+ +  V A+V+GQ  +G+ FC  N A++  V  FS+ +A+GQNFIYFTI  F+ L CTTITTTRKFFTILFSVV YGH +S   W
Sbjct:  191 QEEIAHQLRPSVHQQMLNTNLWAVLYTGVGALVTGQALEGFFFCLENPAILQSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSW 298          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G358_ECTSI1.780e-4272.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G364_ECTSI6.200e-3666.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQ56_9PHAE7.600e-3665.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCP5_9STRA2.530e-3464.81UAA transporter n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A5D6XRA2_9STRA1.150e-2854.63Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4BZF8_PYTIN3.100e-2854.63Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
K3X0M7_GLOUD1.670e-2752.78Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6V2XTI4_HETAK1.850e-2752.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0P1AG43_PLAHL2.120e-2651.85Solute carrier family 35 member b1 n=6 Tax=Peronos... [more]
A0A6A3HCE6_9STRA3.980e-2652.78Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9879contigD-mesarthrocarpus_Contig9879:222..2559 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G358
PFAMsUAA
Model size1555
Max annot lvl2759|Eukaryota
KEGG koko:K15275
KEGG TC2.A.7.11.1,2.A.7.11.4
Hectar predicted targeting categorysignal peptide
Exons2
Evalue9.42e-39
EggNOG OGsCOG0697@1|root,KOG1580@2759|Eukaryota
DescriptionUDP-galactose transmembrane transporter activity
Cds size288
COG categoryU
BRITEko00000,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791138.6150444-UTR-D-mesarthrocarpus_Contig9879:221..2631680791138.6150444-UTR-D-mesarthrocarpus_Contig9879:221..263Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9879 222..263 +
1680791138.6569982-UTR-D-mesarthrocarpus_Contig9879:1334..25591680791138.6569982-UTR-D-mesarthrocarpus_Contig9879:1334..2559Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9879 1335..2559 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791138.6301506-CDS-D-mesarthrocarpus_Contig9879:263..3741680791138.6301506-CDS-D-mesarthrocarpus_Contig9879:263..374Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9879 264..374 +
1680791138.6432729-CDS-D-mesarthrocarpus_Contig9879:1157..13341680791138.6432729-CDS-D-mesarthrocarpus_Contig9879:1157..1334Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9879 1158..1334 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9879.1.1prot_D-mesarthrocarpus_Contig9879.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9879 264..1334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9879.1.1

>prot_D-mesarthrocarpus_Contig9879.1.1 ID=prot_D-mesarthrocarpus_Contig9879.1.1|Name=mRNA_D-mesarthrocarpus_Contig9879.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=96bp
MMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMG
QNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQWG*
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mRNA from alignment at D-mesarthrocarpus_Contig9879:222..2559+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9879.1.1 ID=mRNA_D-mesarthrocarpus_Contig9879.1.1|Name=mRNA_D-mesarthrocarpus_Contig9879.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2338bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9879:222..2559+ (Discosporangium mesarthrocarpum MT17_79)
CAGGACCGCCTGAAGCAGAAGTGTAAGCCGACTGTTCATGAGATGATGTT CTTCATGAACCTGTGGGCCCTGGGTTTCCTGTCGGTACTGGCGGTGGTAT CAGGGCAGGGCAGGGATGGGTACGCGTTTTGTTCTGCCAACACTGCTGTA ATGGTGCGTTTTTAGATGCACTTACATGTGTATGTGCATGCACGTGCGTT TGTGTGCATGAAGTACGCTACTGCACAAATTTTGGTTCATGTGCATGAGT TTATGTGTGTTGTGTAAAGGTATGTGCATGGAGTATATATATATATACAC ACATCCAATAAAGTGTTTACGATGCGCAGCAAGATAGGCGCACACAAAGA GACACCTGAAGGACTGTATGAGGTGCCTTTGGAGGCGTTTGCCTTGAAGG GCGTGATGTGCACGCGGTGTAGGCGTGGGTTATGTGCACTCACGTTCATT ACACTCTTTTTTTTTTCGCCTGCGTGGGCGAAGGTTTTTTTTTTTTTCGG TTCTCTTTCCTTTGCTCTTTCCCTTCTTTTCCCCTTTCTTTTCTCCTTTC TTCTCTTCTTTCTTTTCTCCATTCTTTTCTCCTGTCTTCCCTTCTTTCAC CCATCGTTTCTCCCTTCTTTCCTCCCTCTTTCCTGCCTTCTTTTCTTCTT TCTTTTCCTTTTTTTTTTCTCCTGTCTTTCCTTCTTTCTCCCATAATTTC TCCCTTCTTTTCCTCTCTCCCTTGTTTTCTCCCTCATTTTCTCCTCCTCT CCTTCTTTCTCCCGTCTTTCTTCCCTACTTTCTTCTTTCTTTCCTCCTTT CCTCTGTTCTTTGAATATCGGTTCCAAAATGATTCCGATACTGAAAGATC AGTCTCGTCACGACATGTCGATATATTTATTATTGTCTCTATACACACCC CTACTCCCTTCCCTCTCTGTCCCTGTTGGTCTCCAGGGGGACGTGGTGGG GTTCTCCCTGGCGGCAGCAATGGGGCAGAACTTCATTTACTTCACCATCT CGGCCTTTAATCCTCTGGTCTGCACTACCATTACCACCACACGAAAGTTC TTTACCATCCTCTTCTCGGTAGTGGTGTATGGGCACAGCATCTCTACGGC ACAGTGGGGGTGAGGATTATTACAACGTCAATTTTTTGATGCTGTGAATA ATGTCATGATTGTGATTGCCGTGGCTGTTGTGTGATTGTGATTACGACAC GATTTTCTTTTTCGCTCCATATCATGGGCACAGTGGGGGCGAGAAGGTTA CTGTGTTTTTTACGATTTTACGAACGTGTAATATTGTTCCGATTACTGCT GTGACTGTTTTTACGATTTTACGAAGATGTAATATTGTTCCGATTTTACG AAGACGTAATGTTGTTCCGATCGTTGGAATTTTTTGTGGTACTAATCTTA CGGACACAACAATATTGTTCCAATTAGTCTTGTGAGGGATGTGCTTTGTA TGACTAGGATTGTGATGATGGTTGTGGTTGTTAAAGTTATTTTGGCTGTC AGGATATTTTTATGGTTATGTTATTACTATTATTATCACTACATCTCCCG GCGCTCTGGGGGTGAGAGATGAAAGAGTGATGCGCATTATGGTGAAGGGT TAGGGTTGGGGTTACATATTATAGTGCACTCTATCTATCTCTATCGCTTG GTGGGAGTGAATGATGGAGAGAGCGAGTGATGAATGATAGAAAATATGCA TGCTGCAGTGTGGTGTTCAACGGGTTTTTTTGAACTGTTTATTTGGGTTA GGGTTACGGCATGGTTAATGTAGGTGGTGTTTCTTTCATGTGATCTTGTA ATTGTATACGGGTTGGGATTTGGGTTAGGGTTAGGGTAAACAGTATTTCA TGTACTGTGGTGCTACAGTATGTGGGTTAGGGCTGGGCACTGGTAAGGGC AATCCATGTTCTCTTGCCTGCTGGTAACACACGAAACATAGTGTGAGTTG ATGTTGTCACGATTAATGTTGATGATGTCATGATTAGTGTTGATGATGTC GTGATTGATGCTGATGATGTCATGATTTGTGTTGGTGATGTCATGATTGA TGCTGACGTTGATGATGGTCATGTCGTGATGGTGATGACATGGGGCTGTG GTTCTAGAGAAGCCAAAAGGCAGTAAGAAAGAGAATGAAAGAATAAAGAT AATAGAAAAAGGAAAAAGAAGATGCCACTGCTGCACCCTTAGTCCAGTGC AGCCCACTTAGGAAACACGATTCCATAATTGTCCATGCAGGCACTGTGGA TAGTTCCAAGGCAGTCACAATAGCGTTGTACTCACACAGGGGTGTGACCC TAGTCTTTAAGGGCATCAGACCAATCCCTAGCCTTCTC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9879:222..2559+

>mRNA_D-mesarthrocarpus_Contig9879.1.1 ID=mRNA_D-mesarthrocarpus_Contig9879.1.1|Name=mRNA_D-mesarthrocarpus_Contig9879.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=288bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9879:222..2559+ (Discosporangium mesarthrocarpum MT17_79)
ATGATGTTCTTCATGAACCTGTGGGCCCTGGGTTTCCTGTCGGTACTGGC
GGTGGTATCAGGGCAGGGCAGGGATGGGTACGCGTTTTGTTCTGCCAACA
CTGCTGTAATGGGGGACGTGGTGGGGTTCTCCCTGGCGGCAGCAATGGGG
CAGAACTTCATTTACTTCACCATCTCGGCCTTTAATCCTCTGGTCTGCAC
TACCATTACCACCACACGAAAGTTCTTTACCATCCTCTTCTCGGTAGTGG
TGTATGGGCACAGCATCTCTACGGCACAGTGGGGGTGA
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