mRNA_D-mesarthrocarpus_Contig9848.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9848.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9848.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9848.2.1 vs. uniprot
Match: D7G826_ECTSI (A_deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G826_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.030e-8
Identity = 26/44 (59.09%), Postives = 37/44 (84.09%), Query Frame = 1 
Query:    7 YPFSVNTDDPGVFETNLSSEYAHLAKAHGLDKASMAELACRALE 138
            YPF VNTDD GVF+T+L++E+AHLA ++ LD+  +A LACRA++
Sbjct:  319 YPFGVNTDDSGVFDTDLATEFAHLATSNDLDEEGIACLACRAVQ 362
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9848.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G826_ECTSI1.030e-859.09A_deaminase domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9848contigD-mesarthrocarpus_Contig9848:4171..4365 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G826
Preferred nameADAL
PFAMsA_deaminase
Model size195
Max annot lvl2759|Eukaryota
KEGG rclassRC00477
KEGG koko:K01488,ko:K12191
KEGG ReactionR01560,R02556
KEGG Pathwayko00230,ko01100,ko04144,ko04217,ko05340,map00230,map01100,map04144,map04217,map05340
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043101,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046102,GO:0046103,GO:0046128,GO:0046129,GO:0046130,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659
Exons1
Evalue1.69e-09
EggNOG OGsCOG1816@1|root,KOG1097@2759|Eukaryota
EC3.5.4.4
Descriptionhypoxanthine salvage
Cds size195
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791136.1249583-CDS-D-mesarthrocarpus_Contig9848:4170..43651680791136.1249583-CDS-D-mesarthrocarpus_Contig9848:4170..4365Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9848 4171..4365 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9848.2.1prot_D-mesarthrocarpus_Contig9848.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9848 4171..4365 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9848.2.1

>prot_D-mesarthrocarpus_Contig9848.2.1 ID=prot_D-mesarthrocarpus_Contig9848.2.1|Name=mRNA_D-mesarthrocarpus_Contig9848.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=65bp
SRYPFSVNTDDPGVFETNLSSEYAHLAKAHGLDKASMAELACRALEVSWN
AASAGLPLPVSDDG*
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mRNA from alignment at D-mesarthrocarpus_Contig9848:4171..4365-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9848.2.1 ID=mRNA_D-mesarthrocarpus_Contig9848.2.1|Name=mRNA_D-mesarthrocarpus_Contig9848.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=195bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9848:4171..4365- (Discosporangium mesarthrocarpum MT17_79)
AGCAGGTACCCGTTTTCTGTGAACACGGACGACCCGGGTGTCTTTGAGAC
TAATCTCTCCTCGGAGTACGCGCACCTTGCAAAGGCGCACGGCCTGGACA
AGGCAAGCATGGCAGAACTTGCATGCCGGGCCCTGGAGGTGAGTTGGAAT
GCCGCTTCTGCTGGCCTGCCCCTGCCGGTGTCCGATGATGGTTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9848:4171..4365-

>mRNA_D-mesarthrocarpus_Contig9848.2.1 ID=mRNA_D-mesarthrocarpus_Contig9848.2.1|Name=mRNA_D-mesarthrocarpus_Contig9848.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=195bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9848:4171..4365- (Discosporangium mesarthrocarpum MT17_79)
AGCAGGTACCCGTTTTCTGTGAACACGGACGACCCGGGTGTCTTTGAGAC
TAATCTCTCCTCGGAGTACGCGCACCTTGCAAAGGCGCACGGCCTGGACA
AGGCAAGCATGGCAGAACTTGCATGCCGGGCCCTGGAGGTGAGTTGGAAT
GCCGCTTCTGCTGGCCTGCCCCTGCCGGTGTCCGATGATGGTTGA
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