prot_D-mesarthrocarpus_Contig984.6.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig984.6.1
Unique Nameprot_D-mesarthrocarpus_Contig984.6.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length857
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig984.6.1 vs. uniprot
Match: D8LNR4_ECTSI (RanBP2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNR4_ECTSI)

HSP 1 Score: 417 bits (1073), Expect = 5.470e-127
Identity = 353/882 (40.02%), Postives = 436/882 (49.43%), Query Frame = 0
Query:    1 RSLKEESLRDVLDDSDDDDENCNVKDNKKSPTSTTVGTSENTTPTALTAGAAAEAVQPNLHPTCPRPQGHHKEPRELGHCYVARFPPDLLLQCAEYLTFSPRPLCRAREVCWGWLVLFDGPGAGERLWRPVFGALSATGAISGGGGALGK-GRRLKAYNLSGGLPGSGRGGTAVGQGTRRGISPPLRPPSATNPAT--TDAAGAASAADFPTGAGMATVERVRV-CGACGLLQREGYLGSGCEMCLSSLMLTQTREEGERVTPRLAYMRVELSGPGEERPLTTSLSSPGGRDGRYAPA--QGGACWLRSSPRAEHGA----DPAAAXXXXXXXXXXXXXXXGNDREVPVDGGEAWGSSGCGGGGRVQPLDWHFLVKRLTVEKRLAGQWGSLHRGWEWLQADLQARFRRRMIGSTSNNTPAPSTPLRQSTHPTPATHASRQGKVQGQKEEEVGKNHPPQETPPPLAQPSWTQRQPSPPRCLAEGGERGALEEVEPDPTVARVFRKLAHKRWVALYDSLKALFSLQAEEVAREVVRAVASEEQALANAGXXXXXXXXXXXAFLCLGGGKRCGGGAGKVAGTKTLLGFLQGCVSAWVVYRDWCEEVDMYGELLNERISAERLRTAGAGCGRGDNTPFVRDTALLSFRQSFALNAQICSALREVISLGTADLSRQSSSFTSLP----HSRKGKGKGFQQXXXXXXXXXXXXXAEDMLFTDQELVEDIRAVHFSVQSFSCGSSSGSXXXXXXXXXXXXXARGRKHRRVAGVGGMVGVRTDPGESACAVSKSAMGG---GSYYDWFLSKLERRTEGEEAMLVGDDSSFWEDDIGRG-----GEGGIKGEG---EEEGSLQKLLEQVREMVEELDVPDDSLSKDRNTQG 857
            RSLKEE+L+DVL+DS D  EN +     + P S T    E+ TP +  + +   +  P    T  R +   + P   G C ++  PPDLLLQCAEYL    R LCR REV  GWL+  D   AG RLWRP+F  L A+G+I     A G+  R+LK Y+L    P  G   +A G G   G+S P  P   T  ++    A  A     + +G+G A    V   C  CGL+QR+GY G  CEMC S+L+L + RE     TPRLAY RV LSG G      +S SSP     +  P     GA   RS    + G      PA A                +       GG A G     GGG  + +DWHFLVKRL  EKR+A  WGSL  GW WLQ +LQ   RRR         PAPS      THP P    +      G      G +HP        AQ                     A  + EPDP +AR+ RKL+ K+WV LYDSLKA F+LQAE +ARE+V A AS   A+A A                   GK      G+  G    L  L+GCV+AW  Y+DWCEEVDMY ELLNE ISAER RTAGAGCGRGDNTP++RDTAL+SFR SFALN Q+C+ LR  IS G       S S T  P        G+G G +Q               D LFTD EL+ED RA+ FSV+SFS       XXXXXX         G           +          A + S+S++G    G+YYDWFLSKLE    G+EA ++  D       + R      G G   G G   +   +  +LLE V +MVEELDVPDD+LSK+R+TQG
Sbjct:  174 RSLKEEALKDVLEDSSDS-ENDDHNRRGEGPASHTTKPVEDETPVSTASASETTSAAPADDNTG-RTKTLQQHPGTGGGCVISILPPDLLLQCAEYLG-DARSLCRVREVGLGWLLALDDREAGSRLWRPLFYRLRASGSIHKATDATGQQNRQLKVYDLGTRPPNRGSSASAFGNGLTAGVSTPS-PSQKTRLSSGGPPALAAGKGTPWSSGSGSAAAAVVASSCVVCGLIQRDGYSGKDCEMCASALVLVRGRESP--ATPRLAYTRVNLSGGGGS---CSSFSSPTTMRWQQHPGCLVTGAGSSRSPDLRQKGRVGGITPAGATADGAREAERSIGSCNSS------GGGAQGLEEEFGGG-ARSVDWHFLVKRLAEEKRIANGWGSLQHGWVWLQRELQNMLRRRRGHEQLG--PAPSLTAAVPTHPPPQVELAALSSASGVGTR-GGASHP-------GAQQXXXXXXXXXXXXXTPTAAGRAAADGEPDPRIARLVRKLSTKKWVVLYDSLKATFTLQAEGIAREIVLAAASAA-AVAAAREDQ---------------GKGIVDACGRRPGASADLEGLRGCVAAWEAYKDWCEEVDMYCELLNEHISAERYRTAGAGCGRGDNTPYIRDTALISFRHSFALNVQVCAMLRTAISKGMPTACTDSFSVTGPPLEAARYEPGRG-GAKQDNPRSDTAKSAAGDADELFTDLELMEDSRAIDFSVRSFSGPGGXXXXXXXXXGSRGASTISGACXXXXXXXXAL---------RAASASRSSVGSSRPGNYYDWFLSKLE----GKEAGIIRGDIDARGKSVVRSSPPGEGSGAAGGAGCALQAAATQAELLEAVGDMVEELDVPDDALSKERHTQG 999          
BLAST of mRNA_D-mesarthrocarpus_Contig984.6.1 vs. uniprot
Match: A0A835YZ22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ22_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.150e-15
Identity = 92/301 (30.56%), Postives = 115/301 (38.21%), Query Frame = 0
Query:  576 LQGCVSAWVVYRDWCEEVDMYGELLNERISAERLRTAGAGCGRGDNTPFVRDTALLSFRQSFALNAQICSALREVISLGTADLSRQSSSFTSLPH--------------SRKGKGKGFQQXXXXXXXXXXXXXAEDMLFTDQELVEDIRAVHFSVQSF--SCGSSSGSXXXXXXXXXXXXXARGRKHRRVAGVGGMVGVRTDPGESACAVSKSAMGGGSYYDWFLSKLERRTEGEEAMLVGDDSSFWEDDIGRGGEGGIK---GEGEEEGSLQKLLEQVREMVEELDVPDDSLSKDRNTQG 857
            L+G + AW  YRDWCEEVD            ER              PF+RD ALL+FR +F +N Q+C+A+  V     A                            S    G G                 + MLFTD ELVED RA++FSVQ    S GS  G              +   +H R                              YYDW L ++E R E    +L G   +       RG  GG+K        E S Q+LL ++   VEELDVPDD LS DR+TQG
Sbjct:    7 LRGVLRAWDAYRDWCEEVD------------ER--------------PFIRDAALLAFRNNFVMNVQVCAAVSAVAQHAAAXXXXXXXXXXXXXXXXXXRRMGGRKRACSASDGGSGDMGVGGAAAGDAGTNNEDSMLFTDLELVEDCRALNFSVQHSRRSTGSERG---------LKTSTSTAERHHR-----------------------------HYYDWILERVEGRAED---ILRGTVDA-------RGIAGGVKLALSTAAPE-SRQQLLSRLLSAVEELDVPDDDLSGDRHTQG 232          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig984.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNR4_ECTSI5.470e-12740.02RanBP2-type domain-containing protein n=2 Tax=Ecto... [more]
A0A835YZ22_9STRA3.150e-1530.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 84..121
e-value: 4.0E-4
score: 20.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 664..697
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 809..857
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 725..747
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..201
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 68..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig984contigD-mesarthrocarpus_Contig984:18921..25006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig984.6.1mRNA_D-mesarthrocarpus_Contig984.6.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig984 18921..25006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig984.6.1 ID=prot_D-mesarthrocarpus_Contig984.6.1|Name=mRNA_D-mesarthrocarpus_Contig984.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=857bp
RSLKEESLRDVLDDSDDDDENCNVKDNKKSPTSTTVGTSENTTPTALTAG
AAAEAVQPNLHPTCPRPQGHHKEPRELGHCYVARFPPDLLLQCAEYLTFS
PRPLCRAREVCWGWLVLFDGPGAGERLWRPVFGALSATGAISGGGGALGK
GRRLKAYNLSGGLPGSGRGGTAVGQGTRRGISPPLRPPSATNPATTDAAG
AASAADFPTGAGMATVERVRVCGACGLLQREGYLGSGCEMCLSSLMLTQT
REEGERVTPRLAYMRVELSGPGEERPLTTSLSSPGGRDGRYAPAQGGACW
LRSSPRAEHGADPAAAAAAGGLGVGVGVGVGGNDREVPVDGGEAWGSSGC
GGGGRVQPLDWHFLVKRLTVEKRLAGQWGSLHRGWEWLQADLQARFRRRM
IGSTSNNTPAPSTPLRQSTHPTPATHASRQGKVQGQKEEEVGKNHPPQET
PPPLAQPSWTQRQPSPPRCLAEGGERGALEEVEPDPTVARVFRKLAHKRW
VALYDSLKALFSLQAEEVAREVVRAVASEEQALANAGPSPGPSPSPAPAF
LCLGGGKRCGGGAGKVAGTKTLLGFLQGCVSAWVVYRDWCEEVDMYGELL
NERISAERLRTAGAGCGRGDNTPFVRDTALLSFRQSFALNAQICSALREV
ISLGTADLSRQSSSFTSLPHSRKGKGKGFQQQEEEEEEEVGGGGAEDMLF
TDQELVEDIRAVHFSVQSFSCGSSSGSGSSSGGGGSSGGGARGRKHRRVA
GVGGMVGVRTDPGESACAVSKSAMGGGSYYDWFLSKLERRTEGEEAMLVG
DDSSFWEDDIGRGGEGGIKGEGEEEGSLQKLLEQVREMVEELDVPDDSLS
KDRNTQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR036047F-box-like_dom_sf