prot_D-mesarthrocarpus_Contig9801.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9801.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9801.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length108
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A6H5KTC2_9PHAE (Ribosomal_L28e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTC2_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.470e-43
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 0
Query:    2 GVSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAVLSLKSSKNGKHPKKVVGKSMMKKDFRSVATAIKKQ 108
             VS+EL W+L+++N CFLYKRNGQT RSGKVVL+AEPNNL N NS+KYSGLANSKAVG+ F KD K   CA ++LKSSKNG  PKK VG+S++KK   SV+ AI KQ
Sbjct:    3 NVSNELVWSLVRRNTCFLYKRNGQTKRSGKVVLTAEPNNLTNVNSYKYSGLANSKAVGIQFAKDPKDRPCAAITLKSSKNGNKPKKSVGRSLLKKTHPSVSQAIMKQ 109          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A836CDH5_9STRA (Putative 60S ribosomal protein L28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH5_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.160e-33
Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 0
Query:    3 VSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAVLSLKSSKNGKHPKKVVGKSMMKKDFRSVATAIK 106
            + D L W+L+++NNCF+ KRNG T RSG+VVLS EP NL N +SFKYSGLANSKAVG+  G D KG  C VL+ KSSK    P K V ++++KK+ RS A A+K
Sbjct:    4 IPDSLVWSLVRQNNCFMQKRNGNTRRSGRVVLSGEPMNLKNVHSFKYSGLANSKAVGIAEGADDKGRPCVVLTQKSSKKVNQPAKAVAQTLLKKNNRSSARAVK 107          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A7S2DNV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNV5_9STRA)

HSP 1 Score: 108 bits (269), Expect = 9.560e-28
Identity = 57/107 (53.27%), Postives = 69/107 (64.49%), Query Frame = 0
Query:    5 DELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAV---LSLKSSKNGKHPKKVVGKSMMKKDFRSVATAIKKQ 108
            D LTW L+K  NCF  KRNGQT RSG +VLS+EP NL N N+FKYSGLANSKA+  DF ++ +  +  +   + LK SKNGK P K      + KDFR V   IK Q
Sbjct:    6 DSLTWMLVKNQNCFQQKRNGQTKRSGMIVLSSEPGNLRNINAFKYSGLANSKAIRFDFKEEGEDDDKKIKMSMGLKISKNGKRPNKQYSTIPLNKDFRRVEKCIKAQ 112          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A7S4I2J4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I2J4_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 3.020e-20
Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    3 VSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGH--ECAVLSLKSSKNG--KHPKKVVGKSMMK-KDFRSVATAIKKQ 108
            +S ELTW LI+K+NCF+ +R+G T        ++EPNNL+N ++FK+SGLAN  AVGVDF +DA G+  +  VLS KS K+   + P K   ++  K  DFR VA AIK +
Sbjct:    1 MSSELTWQLIRKHNCFITRRDGAT-------FTSEPNNLMNKHAFKWSGLANKDAVGVDFNRDANGNVTKGCVLSTKSRKSSLRRQPAKTWNRTTFKTSDFRRVAKAIKSE 104          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A446NKP0_TRITD (Ribosomal_L28e domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446NKP0_TRITD)

HSP 1 Score: 87.4 bits (215), Expect = 5.750e-20
Identity = 51/106 (48.11%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    3 VSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAVLSLKSSKNGKHPKKVVGKSMMKKDFRSVATAIKKQ 108
            VSD L W L++KNNCFL K+ G +  + KV  S EPNNL N +S+KYSGLAN K V V    D +     VLS   SK    P     K++M+K+FR +A AIK Q
Sbjct:    4 VSDSLVWELVRKNNCFLIKQFGNS--NAKVQFSKEPNNLYNVHSYKYSGLANKKTVTVQPAADKE--MTVVLSTTKSKKQNKPAAFTHKTVMRKEFRKMAKAIKNQ 105          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A453F9J6_AEGTS (Ribosomal_L28e domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453F9J6_AEGTS)

HSP 1 Score: 86.7 bits (213), Expect = 1.070e-19
Identity = 50/106 (47.17%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    3 VSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAVLSLKSSKNGKHPKKVVGKSMMKKDFRSVATAIKKQ 108
            VSD L W L++KNNCFL K+ G +  + KV  S EPNNL N +S+KYSGLAN K V V     A+     VLS   SK    P     K++M+K+FR +A A+K Q
Sbjct:    4 VSDSLVWELVRKNNCFLIKQFGNS--NAKVQFSKEPNNLYNVHSYKYSGLANKKTVTVQ--PAAEKEMTVVLSTTKSKKQNKPAAFTHKTVMRKEFRKMAKAVKNQ 105          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A453F9S1_AEGTS (Ribosomal_L28e domain-containing protein n=8 Tax=Pooideae TaxID=147368 RepID=A0A453F9S1_AEGTS)

HSP 1 Score: 86.7 bits (213), Expect = 1.840e-19
Identity = 50/106 (47.17%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    3 VSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAVLSLKSSKNGKHPKKVVGKSMMKKDFRSVATAIKKQ 108
            VSD L W L++KNNCFL K+ G +  + KV  S EPNNL N +S+KYSGLAN K V V     A+     VLS   SK    P     K++M+K+FR +A A+K Q
Sbjct:   41 VSDSLVWELVRKNNCFLIKQFGNS--NAKVQFSKEPNNLYNVHSYKYSGLANKKTVTVQ--PAAEKEMTVVLSTTKSKKQNKPAAFTHKTVMRKEFRKMAKAVKNQ 142          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A7S2EU82_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EU82_TRICV)

HSP 1 Score: 86.7 bits (213), Expect = 2.090e-19
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    5 DELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAVLSLKSSKNGKHPKKVVGKSMMKKDFRSVATAIKKQ 108
            D L W L+ +NNCF+ K NG+T+RSG +  S EP NL + ++ +YSG+AN+KAVG+DF   A+G +  + +  +SK    PKK      + KD+R     I+ Q
Sbjct:    6 DALVWQLVNRNNCFMKKTNGRTSRSGSIKFSVEPGNLRSLSTLRYSGIANTKAVGIDF---AEGDKAVLTTKTASKASTAPKKGRATIPLNKDYRRTEKTIRSQ 106          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: K3XMZ1_SETIT (Ribosomal_L28e domain-containing protein n=23 Tax=Poaceae TaxID=4479 RepID=K3XMZ1_SETIT)

HSP 1 Score: 83.6 bits (205), Expect = 2.950e-18
Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    3 VSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAV-LSLKSSKNGKHPKKVVGKSMMKKDFRSVATAIKKQ 108
            V D L W +++KNN FL K+ G +  + KV  S EPNNL N +S+KYSGLAN K V V     A G E AV LS   +K    P  +  KS+M+K+FR +A A+K Q
Sbjct:    4 VPDSLVWEIVRKNNSFLVKQFGNS--NAKVQFSKEPNNLYNVHSYKYSGLANKKTVTVQ---PASGKEMAVVLSTTKTKKQNKPASLYHKSVMRKEFRKMAKAVKNQ 105          
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Match: A0A1Y1HYY9_KLENI (60S ribosomal protein L28 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYY9_KLENI)

HSP 1 Score: 83.6 bits (205), Expect = 3.260e-18
Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    2 GVSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYSGLANSKAVGVDFGKDAKGHECAVLSLKSSKNGKHPKKVVGKSMMKKDFRSVATAI 105
            GVS +L W L+KK N FLYK+ G T R  +V  ++EPNNL+N N+FKYSGLAN K+VG+      +G    V +    K G+ P K V  ++ KKD R VA A+
Sbjct:    3 GVSQDLLWLLVKKQNRFLYKQGGGTTR--QVQFTSEPNNLMNKNTFKYSGLANPKSVGIQ----EEGDHVVVRTTNPKKAGQ-PAKHVSSNVHKKDNRRVAKAV 99          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9801.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTC2_9PHAE1.470e-4367.29Ribosomal_L28e domain-containing protein n=2 Tax=E... [more]
A0A836CDH5_9STRA4.160e-3357.69Putative 60S ribosomal protein L28 n=1 Tax=Tribone... [more]
A0A7S2DNV5_9STRA9.560e-2853.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4I2J4_9EUKA3.020e-2047.75Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A446NKP0_TRITD5.750e-2048.11Ribosomal_L28e domain-containing protein n=1 Tax=T... [more]
A0A453F9J6_AEGTS1.070e-1947.17Ribosomal_L28e domain-containing protein n=1 Tax=A... [more]
A0A453F9S1_AEGTS1.840e-1947.17Ribosomal_L28e domain-containing protein n=8 Tax=P... [more]
A0A7S2EU82_TRICV2.090e-1941.35Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
K3XMZ1_SETIT2.950e-1846.73Ribosomal_L28e domain-containing protein n=23 Tax=... [more]
A0A1Y1HYY9_KLENI3.260e-1847.1260S ribosomal protein L28 n=1 Tax=Klebsormidium ni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.390.110coord: 4..108
e-value: 2.6E-28
score: 101.0
NoneNo IPR availablePANTHERPTHR10544:SF060S RIBOSOMAL PROTEIN L28coord: 3..108
IPR029004Ribosomal L28e/Mak16PFAMPF01778Ribosomal_L28ecoord: 7..108
e-value: 2.3E-22
score: 79.9
IPR002672Ribosomal protein L28ePANTHERPTHR1054460S RIBOSOMAL PROTEIN L28coord: 3..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9801contigD-mesarthrocarpus_Contig9801:46..2424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9801.1.1mRNA_D-mesarthrocarpus_Contig9801.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9801 46..2424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9801.1.1 ID=prot_D-mesarthrocarpus_Contig9801.1.1|Name=mRNA_D-mesarthrocarpus_Contig9801.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=108bp
MGVSDELTWALIKKNNCFLYKRNGQTARSGKVVLSAEPNNLLNYNSFKYS
GLANSKAVGVDFGKDAKGHECAVLSLKSSKNGKHPKKVVGKSMMKKDFRS
VATAIKKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029004L28e/Mak16
IPR002672Ribosomal_L28e