mRNA_D-mesarthrocarpus_Contig9759.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9759.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig9759.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9759.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9759contigD-mesarthrocarpus_Contig9759:14..2051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size604
Hectar predicted targeting categoryother localisation
Exons4
Cds size561
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9759.1.2prot_D-mesarthrocarpus_Contig9759.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9759 19..2013 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791127.5361426-UTR-D-mesarthrocarpus_Contig9759:13..181680791127.5361426-UTR-D-mesarthrocarpus_Contig9759:13..18Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9759 14..18 -
1680791127.5987334-UTR-D-mesarthrocarpus_Contig9759:2013..20511680791127.5987334-UTR-D-mesarthrocarpus_Contig9759:2013..2051Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9759 2014..2051 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791127.5496097-CDS-D-mesarthrocarpus_Contig9759:18..2551680791127.5496097-CDS-D-mesarthrocarpus_Contig9759:18..255Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9759 19..255 -
1680791127.5602443-CDS-D-mesarthrocarpus_Contig9759:1019..11461680791127.5602443-CDS-D-mesarthrocarpus_Contig9759:1019..1146Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9759 1020..1146 -
1680791127.5714598-CDS-D-mesarthrocarpus_Contig9759:1398..15021680791127.5714598-CDS-D-mesarthrocarpus_Contig9759:1398..1502Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9759 1399..1502 -
1680791127.5832016-CDS-D-mesarthrocarpus_Contig9759:1920..20131680791127.5832016-CDS-D-mesarthrocarpus_Contig9759:1920..2013Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9759 1921..2013 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9759.1.2

>prot_D-mesarthrocarpus_Contig9759.1.2 ID=prot_D-mesarthrocarpus_Contig9759.1.2|Name=mRNA_D-mesarthrocarpus_Contig9759.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=187bp
MSSKGEDGLSELVIYVEPLPPLFDPLKIFDLSKDELEPYLILLTNHDSPE
EVRWGCLENGSTVDACFGTSPRASFGLPTYDANSRGEEWSARSAAEAKAY
LRHLPESKHGPVIHFYRTLFQELLSYHRKVGRCGVCALCMRSGLQEKVVT
AIGMALTMLRESLREDGDGEEPPQEGTFQRLQQPII*
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mRNA from alignment at D-mesarthrocarpus_Contig9759:14..2051-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9759.1.2 ID=mRNA_D-mesarthrocarpus_Contig9759.1.2|Name=mRNA_D-mesarthrocarpus_Contig9759.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2038bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9759:14..2051- (Discosporangium mesarthrocarpum MT17_79)
GTTGGTATCTAAAGTCCTGCCTTCTCCAGGAGAGAGAAATGTCCTCAAAA
GGAGAAGATGGGCTGTCGGAGCTCGTCATCTACGTTGAACCTCTCCCCCC
TCTCTTCGATCCGCTTAAGATATTTGACTTGGTGAGTGGGGATTTTGCGG
TGTGTCGCTGTTTTCAGCTGGTGAGGCTCCTCAGGTTGGCATGTCGGCAT
TCCTGGTGATTGTAATCGAGACGTGGACCAAAGGCTTTCCATCCGTTTCG
ATGTAAGGGTAATGAGGCTATGATGAGATGGAGATAGATTTGGAAGAAGT
CGTGAATGCTTAATTGGATCGGGACAACGCTTGCATCGCTCCTAATGCTG
CTCCAAGGAGTTTAGATTGTGCCGTATCTTTGAAGACACATTGATGTAAA
TGTGTTCTTCATTTGATCTATGCATATCCTGTAGGATTCTGAGTCACCCT
TCATACCTGCCCTGTTTATTCTGTTACATTTACTGTGACAATGCTCCCGG
ACCTCGTGAATGTACGCCTCATCCCTACATTTTTCTGCCCAAACTGCAGT
CCAAGGACGAGTTGGAGCCCTACTTGATCTTACTCACCAACCACGACAGC
CCCGAAGAGGTCCGCTGGGGTTGCCTCGAGAACGGCTCGACTGTTGATGC
CTGGTGCGATTGTGGGACCGTTTGATGCTTTGCCCTATGATAAGAAATGC
GCCTGGCCAACTGACCTGACCCAACATCGTCTATATATAGCTCCTCGTAA
CTTTCTAATCCAGTGTAGACCACCTTCATGCGCAAACCGCAGTGACTTTC
ATTTCCTAACTTGTTCAACTGCTATCTTTCCGTATCAATGTTTAAATTGC
ATACCGATCGGGGCCGACCGAAACAAATGGGCCTGTGCTTGTCCCCGTTG
GGCAGCTTCGGCACCTCCCCCCGCGCATCTTTCGGTCTTCCCACTTATGA
CGCGAATTCCAGAGGAGAGGAATGGAGTGCTCGCTCCGCTGCTGAAGCTA
AGGCCTATCTTCGGCATCTTCCAGAATCTAAGGTACGTTAATGATGTTCG
CGAATTGGGAAGTGAAGTCGCATCATTGTGGATAACCCTGTTCTTGCTCC
TACCAACCTGTACGTGTTTGTGCCTCTAGTGGACAAGACCCGTGATATTG
ATATTGTTCTGGTGCCAGATACCTTTTCCAAACCACTGCAAAGATTCACA
TGTATCAAGTGGAGGTAGTTCGGGAGTTTTTTAACACAAACAGGGATGGG
TGGAATGAAGGCAAGTGGGATTAAGTTTACTCTCTCACATGGACAAGCTG
CCCGTGAAGTGCAGTGAGGAAGACAACAAAATTAGCTCCATACTTCGAGT
GATAACTTGGGGTTGCCAGAGGCACAATCATAGCAGCAGGGAACGTTTCT
TTGAAACCAATCAGGAGCAACAACAGCAAGCAAGCAATCGGCAAGCGATC
TAGCTGTAAACGTTTCAGGCTTGTCAATGCCAAGCCGAGCCCGTCCACCA
AACTCTAATGCTCTACTTGTATTGTACTGTCGTATGCTCTGCCGTACTGC
ACTGCGTTGGTCTGCGGGCAAGGGTTGCTGTGAGCACATACATGGGTGTG
TGTCTGTGTTTGTTTTAGGCTCTTCTGTGAGACAAATGACACGAACTTGG
TCAGTATCTTCCCCAACAATGATGGTCATGCTTTCTCAGCAGTTGACAAC
CAAGCAATAACCTTCCCCTCCCACAGTCTCTCCCGAGCAAAGACTGTTAC
CGTATTCTCCCTCCCCACCGCCCTCTTTCCCCCACCCCCCCACCAGCATG
GCCCGGTAATACACTTCTATCGAACCCTATTCCAAGAGTTGCTCAGCTAC
CACAGAAAAGTGGGACGCTGCGGGGTCTGTGCCCTCTGTATGCGTTCAGG
GTTGCAGGAGAAGGTGGTGACAGCAATTGGCATGGCGCTGACAATGCTAA
GGGAGAGTCTTAGGGAGGATGGTGATGGGGAAGAGCCGCCACAGGAAGGG
ACATTCCAAAGGCTACAGCAACCCATCATTTAGAGGAT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9759:14..2051-

>mRNA_D-mesarthrocarpus_Contig9759.1.2 ID=mRNA_D-mesarthrocarpus_Contig9759.1.2|Name=mRNA_D-mesarthrocarpus_Contig9759.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=561bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9759:14..2051- (Discosporangium mesarthrocarpum MT17_79)
ATGTCCTCAAAAGGAGAAGATGGGCTGTCGGAGCTCGTCATCTACGTTGA
ACCTCTCCCCCCTCTCTTCGATCCGCTTAAGATATTTGACTTGTCCAAGG
ACGAGTTGGAGCCCTACTTGATCTTACTCACCAACCACGACAGCCCCGAA
GAGGTCCGCTGGGGTTGCCTCGAGAACGGCTCGACTGTTGATGCCTGCTT
CGGCACCTCCCCCCGCGCATCTTTCGGTCTTCCCACTTATGACGCGAATT
CCAGAGGAGAGGAATGGAGTGCTCGCTCCGCTGCTGAAGCTAAGGCCTAT
CTTCGGCATCTTCCAGAATCTAAGCATGGCCCGGTAATACACTTCTATCG
AACCCTATTCCAAGAGTTGCTCAGCTACCACAGAAAAGTGGGACGCTGCG
GGGTCTGTGCCCTCTGTATGCGTTCAGGGTTGCAGGAGAAGGTGGTGACA
GCAATTGGCATGGCGCTGACAATGCTAAGGGAGAGTCTTAGGGAGGATGG
TGATGGGGAAGAGCCGCCACAGGAAGGGACATTCCAAAGGCTACAGCAAC
CCATCATTTAG
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