mRNA_D-mesarthrocarpus_Contig9719.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9719.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9719.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9719.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9719contigD-mesarthrocarpus_Contig9719:634..1440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size456
Hectar predicted targeting categoryother localisation
Exons2
Cds size456
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791124.7599654-CDS-D-mesarthrocarpus_Contig9719:633..8191680791124.7599654-CDS-D-mesarthrocarpus_Contig9719:633..819Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9719 634..819 +
1680791124.7705755-CDS-D-mesarthrocarpus_Contig9719:1170..14401680791124.7705755-CDS-D-mesarthrocarpus_Contig9719:1170..1440Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9719 1171..1440 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9719.1.1prot_D-mesarthrocarpus_Contig9719.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9719 634..1440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9719.1.1

>prot_D-mesarthrocarpus_Contig9719.1.1 ID=prot_D-mesarthrocarpus_Contig9719.1.1|Name=mRNA_D-mesarthrocarpus_Contig9719.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=152bp
LAASIPQIGSLVSIDLTNNRLGGDAVKTLLAALATQGGLTSVSLRTNNMG
PIGALATANFLQQSPGLLHLDLGGNEILDAGLRALCGGLASHPNLTSLAL
PRNRLGVQGGQALADCLKHGREGRGGRRSGCPTLRELDLSWNNLRGKGAV
AI
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mRNA from alignment at D-mesarthrocarpus_Contig9719:634..1440+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9719.1.1 ID=mRNA_D-mesarthrocarpus_Contig9719.1.1|Name=mRNA_D-mesarthrocarpus_Contig9719.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=807bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9719:634..1440+ (Discosporangium mesarthrocarpum MT17_79)
CTGGCTGCATCCATTCCACAAATAGGCTCTCTCGTGAGCATCGACCTCAC
CAACAACAGGCTTGGAGGGGACGCCGTGAAAACTCTCCTGGCCGCCCTTG
CAACGCAGGGGGGTCTTACTTCCGTCTCCCTGAGAACGAACAACATGGGG
CCGATAGGAGCCCTAGCAACAGCCAACTTCTTGCAGGTGAAGAGACCATG
TGGACCTTGCTAGGCATCTATCTGTGGGTGGGGTTAGGCAGTGGGATTAG
GCACAGACAGCAGAGGTCTGGGAGTCTTCTATGTATGCCAGTGGGCGGCG
GGGTAGAAAAAGTGCAGTTTTTTTTAACCTTCATTTACGCCACAAAGTAA
TGTGTATAATTTTTGCCGGAATAGTTAATTGTGTTTTTAAAGGAATAGTT
AATAGTGTTTTTCAAGGAATAGTTAATAGTATTGAACATGCGAATACACT
GCTCCAGAAGAAAAAAAAGGAATGCAACCATGATCTCCTTCAGCTCTACG
CCTTTATTAGTCTCTTCTCCTGTCTCACCTACTGCAGCAATCCCCAGGCC
TGCTACACCTGGACCTGGGTGGGAATGAAATCCTTGATGCCGGTCTGCGT
GCCCTCTGCGGGGGGCTGGCATCCCACCCCAACCTGACATCTCTAGCCTT
GCCCCGGAACCGCTTGGGGGTTCAAGGGGGTCAGGCCCTTGCGGATTGCC
TGAAACACGGCAGGGAGGGGCGGGGGGGCAGGAGGAGTGGGTGCCCTACA
CTGCGAGAGCTAGACCTTTCCTGGAACAATCTCCGAGGGAAAGGTGCCGT
GGCGATT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9719:634..1440+

>mRNA_D-mesarthrocarpus_Contig9719.1.1 ID=mRNA_D-mesarthrocarpus_Contig9719.1.1|Name=mRNA_D-mesarthrocarpus_Contig9719.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=456bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9719:634..1440+ (Discosporangium mesarthrocarpum MT17_79)
CTGGCTGCATCCATTCCACAAATAGGCTCTCTCGTGAGCATCGACCTCAC
CAACAACAGGCTTGGAGGGGACGCCGTGAAAACTCTCCTGGCCGCCCTTG
CAACGCAGGGGGGTCTTACTTCCGTCTCCCTGAGAACGAACAACATGGGG
CCGATAGGAGCCCTAGCAACAGCCAACTTCTTGCAGCAATCCCCAGGCCT
GCTACACCTGGACCTGGGTGGGAATGAAATCCTTGATGCCGGTCTGCGTG
CCCTCTGCGGGGGGCTGGCATCCCACCCCAACCTGACATCTCTAGCCTTG
CCCCGGAACCGCTTGGGGGTTCAAGGGGGTCAGGCCCTTGCGGATTGCCT
GAAACACGGCAGGGAGGGGCGGGGGGGCAGGAGGAGTGGGTGCCCTACAC
TGCGAGAGCTAGACCTTTCCTGGAACAATCTCCGAGGGAAAGGTGCCGTG
GCGATT
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