mRNA_D-mesarthrocarpus_Contig9715.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9715.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9715.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9715.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9715contigD-mesarthrocarpus_Contig9715:2296..3133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LBI4
PFAMsMetallophos,Metallophos_C,Pur_ac_phosph_N
Model size838
Max annot lvl2759|Eukaryota
KEGG koko:K22390
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.12e-08
EggNOG OGsCOG1409@1|root,KOG1378@2759|Eukaryota
Descriptionacid phosphatase activity
Cds size318
COG categoryE
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791124.502186-UTR-D-mesarthrocarpus_Contig9715:2295..23891680791124.502186-UTR-D-mesarthrocarpus_Contig9715:2295..2389Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9715 2296..2389 +
1680791124.5331001-UTR-D-mesarthrocarpus_Contig9715:2707..31331680791124.5331001-UTR-D-mesarthrocarpus_Contig9715:2707..3133Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9715 2708..3133 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791124.5166771-CDS-D-mesarthrocarpus_Contig9715:2389..27071680791124.5166771-CDS-D-mesarthrocarpus_Contig9715:2389..2707Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9715 2390..2707 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9715.2.1prot_D-mesarthrocarpus_Contig9715.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9715 2390..2707 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9715.2.1

>prot_D-mesarthrocarpus_Contig9715.2.1 ID=prot_D-mesarthrocarpus_Contig9715.2.1|Name=mRNA_D-mesarthrocarpus_Contig9715.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=106bp
MIMRMKEYLHLILLVIGLVCDSGLAQVALCSSSEFVGVDNAGVSGVVPEQ
VHISLASPRPRGEYDIAVSWVTWSRSETQVRWGSSEVDLVNLVEGVSTSE
ILDAF*
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mRNA from alignment at D-mesarthrocarpus_Contig9715:2296..3133+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9715.2.1 ID=mRNA_D-mesarthrocarpus_Contig9715.2.1|Name=mRNA_D-mesarthrocarpus_Contig9715.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=838bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9715:2296..3133+ (Discosporangium mesarthrocarpum MT17_79)
GTAATTGTGTTCAACATACGACTGATGATCGATACTTGAGCTGTTTCCAG
TTAACGTTGCCCTCCCTGTTCACCTGCACACTGCTGTACATGCCATGATC
ATGAGGATGAAAGAATACCTCCATTTAATTTTGCTGGTGATAGGGTTGGT
CTGTGATAGTGGACTCGCTCAGGTCGCCCTGTGCTCGTCATCGGAGTTTG
TGGGTGTCGACAACGCCGGCGTGAGCGGGGTCGTGCCGGAGCAGGTCCAC
ATTTCACTCGCTTCCCCGCGTCCCAGAGGAGAGTACGATATTGCTGTTTC
CTGGGTTACTTGGTCCAGGTCCGAGACGCAAGTGCGCTGGGGATCTTCCG
AGGTGGACCTCGTGAATCTTGTCGAGGGTGTTTCCACAAGTGAGATTCTA
GACGCGTTCTAAGGCATTAATATGGGCTTCGCCCTTCGTCTCAGTCTTAA
TTTTGCATTGACGAACAAACCCTTTGCTTGGGGAGAGTAGGCGTGCTTAC
ACCTGCGCTGAATGTTGTGCTTACAGCTACAACGGTTAAGTATATTTTTT
CCGTTCAGCCGCGTTCGTTGGAACGGTGGCCGCGAGTTCGACTCCGAAAG
GAGAAAAAAAATCCTATCTCTGTCTACATTAAACTTGCGGAAGAGTGTGG
AGTCTGGGTTGTGGACTCATGGTGCCTTTCTTATAGTCTCAACATGGGTT
CGTTTCTTCCTTGTAGATACTCTACGTAAGGAATGTCTGATACGCGAACG
GAATGTTGCAGCAAGGGTCAGAGGATGTACCCAGCCGGTGGCATTGATAT
CACGGCAAGAAAAAGAAGAATAAAATAGAGTGGGGCTC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9715:2296..3133+

>mRNA_D-mesarthrocarpus_Contig9715.2.1 ID=mRNA_D-mesarthrocarpus_Contig9715.2.1|Name=mRNA_D-mesarthrocarpus_Contig9715.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=318bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9715:2296..3133+ (Discosporangium mesarthrocarpum MT17_79)
ATGATCATGAGGATGAAAGAATACCTCCATTTAATTTTGCTGGTGATAGG
GTTGGTCTGTGATAGTGGACTCGCTCAGGTCGCCCTGTGCTCGTCATCGG
AGTTTGTGGGTGTCGACAACGCCGGCGTGAGCGGGGTCGTGCCGGAGCAG
GTCCACATTTCACTCGCTTCCCCGCGTCCCAGAGGAGAGTACGATATTGC
TGTTTCCTGGGTTACTTGGTCCAGGTCCGAGACGCAAGTGCGCTGGGGAT
CTTCCGAGGTGGACCTCGTGAATCTTGTCGAGGGTGTTTCCACAAGTGAG
ATTCTAGACGCGTTCTAA
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