mRNA_D-mesarthrocarpus_Contig97.9.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig97.9.1
Unique NamemRNA_D-mesarthrocarpus_Contig97.9.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig97.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig97contigD-mesarthrocarpus_Contig97:38926..42091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FT64
PFAMsFYVE,PH,Sec7,zf-RanBP
Model size843
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue6.63e-17
EggNOG OGsKOG1729@1|root,KOG1729@2759|Eukaryota
Descriptionlipid binding
Cds size840
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791123.0928144-CDS-D-mesarthrocarpus_Contig97:38927..390471680791123.0928144-CDS-D-mesarthrocarpus_Contig97:38927..39047Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig97 38928..39047 -
1680791123.105996-CDS-D-mesarthrocarpus_Contig97:39535..399791680791123.105996-CDS-D-mesarthrocarpus_Contig97:39535..39979Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig97 39536..39979 -
1680791123.1183918-CDS-D-mesarthrocarpus_Contig97:40382..404901680791123.1183918-CDS-D-mesarthrocarpus_Contig97:40382..40490Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig97 40383..40490 -
1680791123.1301284-CDS-D-mesarthrocarpus_Contig97:41923..420911680791123.1301284-CDS-D-mesarthrocarpus_Contig97:41923..42091Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig97 41924..42091 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig97.9.1prot_D-mesarthrocarpus_Contig97.9.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig97 38928..42091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig97.9.1

>prot_D-mesarthrocarpus_Contig97.9.1 ID=prot_D-mesarthrocarpus_Contig97.9.1|Name=mRNA_D-mesarthrocarpus_Contig97.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=280bp
AHGERRELEAKEAIDCLNLITTYRCDQTHQALGLAGFPGIGPILDEAGER
GGGAFQAVFQLVAADPAADVTSSDVLGPIIRGAHYGALHRLLVPAPLSWP
LYTPPSTAARTRHRELTKEVQARACDTLRLALLQLLHNTEAEDGAGAAAG
QGVEGQTSSNSFDAPSLALSFLPNVFFLTQTLEGAKCLRTMAVAGGETGE
VALSAILSPSISLQGSRAMGERQEGQGGKDPWITNIVRMLEPENPAGVRA
AGCAILNALATRPPQERSSAELKCRLTASD
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mRNA from alignment at D-mesarthrocarpus_Contig97:38926..42091-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig97.9.1 ID=mRNA_D-mesarthrocarpus_Contig97.9.1|Name=mRNA_D-mesarthrocarpus_Contig97.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3166bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig97:38926..42091- (Discosporangium mesarthrocarpum MT17_79)
GCACATGGGGAGAGGAGGGAGCTGGAGGCAAAGGAGGCCATCGATTGCCT
TAATCTGATCACCACGTATCGATGTGACCAGACCCACCAGGCCTTGGGGC
TGGCAGGATTTCCCGGCATTGGCCCAATCCTAGACGAGGCTGGAGAGAGA
GGGGGAGGGGCATTTCAGGTTGGTTTGGCAAGACTTGGGAGGGGGAGAAG
GTAGGGAAGCGTTGCAGGGGGGTGGGAATGAACCCTTTGCAGAAAGGTGG
TTTGGGCTCCAAGAGACCTTCATCCTTTGTCTACGTGGAATGTTGACAGG
GGGGGGTTGTCAGGTGTTCCGCGATCACCAGGATGCTGCAAGTCTTTTGT
GTTCAGTGGTGAATGAGATCCACATCACTTCAAACAACCCTTTCTTTGCT
GTTCTTATTCCTTTTTATATCTTTTTTTTTTTGCAACTTCTTTTTCGTCT
CATTTTTGCTTCTTTTTTTTTCCACTTTTTTTTTGCTCTTATTTCTTGCA
ATCTTTTTTTTTGTGGGCACGTGTGACCGTGCAAGATGGTCTCTAATCCT
GGACAAGTCTTGCCCGAATCAATCTTTAGGGCTCGTTCTTGTTCAATCAG
TGCCTCAGGAAATGGAGCACCCCAACAAACAAGTCTAGAGCATTTTGGGG
CTGTTTTTGGGCTGTTTTTGGGCTGTTCCAGACGAATCTTGGCCCGAAAG
ATGATCAGATCTGACGATTTGATTGGTTGGAAATCTCCAAGACTATTAAC
TCATATGTCACTGTGCGATGAAGAATCGGAACGCGCTAAACACACTGTGA
GAAAGGGTGCCCCTGGTTTCAGGCTCTCCTCCACGTGCACAGGCCCCCTG
GGCCTGGTGTTGAGATTACCAGCCAAAAGATACAGACACTATAGCCGCGA
CTATCATGAGATGTGAGACGTGGCCTTGGGGCCTACCTCGGCTTGATCAT
GCATGGCGCTTCAGCCAGCCACCCAGCCACTGCAGCCAGTTTTGAATTTT
CTTCTCAGTTGGGGCCCCCTCTATACTCCTTTATCCCCCTGTATACCCTA
GTATACATTAATCTATATACATATCTTCTCCCCCCAAGGGTTTCCGCATG
GAGTTGGGCTGGATCAGAGTCCTCGCTGCGCATCAATGGAACAAAAAAGT
CAGCGTAACTGACGGTCATGCAAAGTTTGCAGTCCTCGCCAAGAGAAAAC
GACACCGTCCTTCAGTGTGCATTGAAATGTTTTGAATGTTTTTCTGGGGA
AGAGAGTGTGTTGGTTTTTCTTCTCTTATCCTTGACCGGATCCCATCCCT
TGGCTTGCCAGTCCAGCTACATAGGCCTTACTGGAGCGGGAGGGGATGGG
TGGGCTGGGTCTTGGCTATGCCGTTTTGTTCATTAACCACTGGGCACCTT
CAAGCTCTATGCCTGAAGGATGGATTCCTGCGTTGGGATGGAAGAAAAAC
TCTGAAAACATTCTGTGATACCCAATCAATGGAAACCCTGAGTATCCCTG
CGCCGGCTCTACCCTGTGCTTGCAGAAAAAGATGAACGACCATGTTCCTT
CTGACAAATTACCAACCCCTCGGTTTCGTAACCTCCCCCCCACCTCCGAA
GGCGGTGTTCCAGCTTGTCGCAGCAGACCCTGCAGCTGATGTGACCTCCT
CAGATGTGCTGGGGCCCATCATCAGGGGGGCTCACTATGGAGCTCTCCAT
CGCCTGTTGGTGTGTGCTTTGATTCGTACGTGCTCCAAATGTTTTACTTC
AAACGTTTTTTTTTTTTGTCCACTACTGTAATGTACTTGGAGGCACTTCT
TTTTTTTTCCACTCCCCTCATTCTGCTCTGAAATGAGTATGGCCATGTTT
TTTTGGACGCATTTGGGGGTACAGGTAGGCTGGGTCCAACGAGGTAAAAC
GTTGCCCCCTCGACTCCCTGCAGAACTTCGTGTTAGAATTAGGGTTAGGG
TATTTCAAGGAGGGAAAAAAGTCGCCTTTGCTCCTGTTGCCATCCCCTTC
ACACCTCCCTTCCTCTCTGATTCGCCCTCCTCCCCGTTATCCCCCCCACT
ACCCCTGCCCACCATGTGCTCCTCCCCCGACTGGACCTCAACAAAAATCA
AACTGTATGAAGGTGCCTGCCCCCCTCTCATGGCCATTGTACACGCCTCC
ATCAACGGCAGCACGTACACGCCATAGGGAGCTCACCAAGGAGGTCCAAG
CGCGAGCCTGTGACACCCTCCGACTTGCCCTCCTGCAGTTGCTCCACAAC
ACAGAGGCTGAGGATGGGGCAGGGGCAGCGGCAGGGCAAGGGGTGGAGGG
GCAGACATCGTCCAATTCCTTCGATGCCCCGTCGCTGGCCTTGTCCTTCT
TGCCCAACGTGTTCTTTCTCACCCAAACCCTGGAAGGTGCCAAGTGCCTC
AGGACCATGGCAGTTGCCGGGGGGGAGACAGGAGAGGTGGCGCTCTCGGC
CATCCTTTCCCCGAGCATTTCTCTACAGGGCTCCAGGGCAATGGGGGAGA
GACAGGAGGGGCAGGGAGGGAAGGATCCGTGGATCACCAACATAGTGAGA
ATGCTGGTGAGTCTGGGCAGGGTGGGATGGGGGGTCACTTGCAGATGAAA
CCCCAGTCCCAAGAAAGGGCTTGGCAGCGGGCAGGGCTGGGGTCTGAGCC
GTTGCTGGAAGGACCAAGACAGCAGTATCACTTTTGTTTTAGGATCCAGG
AACATGTTGGAAATCCCCTTGTGATGGGGGCGGAGGGGCAAGCAGCACGG
CCCCAAGCCAATGCAAGGGAAACTTGAGCATTATGAAGAAACCATCCTGA
GAGGCTCTCACAAGAAACTAGAGAAACGAAGGGAAAAAATATCAAAAGAG
GGATCCCGAGCCCATGACCCCCCCCCCGCCCCACCACCACTGAACGAGCA
AAGAGAACAATGAAAAAACTAGAGGAATGAAACTGCTGACTCAGTCTCAC
TGTCATCATCCATGCTTTTTTCAACAGGACACATTAGATTCGCAAAAAAA
AATGGTAAATCGAATGGCTTGTATTACAAAAAACGCCTATGCAGGAACCA
GAAAACCCCGCCGGGGTCCGCGCTGCTGGCTGCGCCATCCTCAATGCCCT
GGCCACTAGGCCCCCCCAGGAGAGGTCCTCCGCAGAGCTGAAATGCCGCC
TCACTGCTTCTGACAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig97:38926..42091-

>mRNA_D-mesarthrocarpus_Contig97.9.1 ID=mRNA_D-mesarthrocarpus_Contig97.9.1|Name=mRNA_D-mesarthrocarpus_Contig97.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=840bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig97:38926..42091- (Discosporangium mesarthrocarpum MT17_79)
GCACATGGGGAGAGGAGGGAGCTGGAGGCAAAGGAGGCCATCGATTGCCT
TAATCTGATCACCACGTATCGATGTGACCAGACCCACCAGGCCTTGGGGC
TGGCAGGATTTCCCGGCATTGGCCCAATCCTAGACGAGGCTGGAGAGAGA
GGGGGAGGGGCATTTCAGGCGGTGTTCCAGCTTGTCGCAGCAGACCCTGC
AGCTGATGTGACCTCCTCAGATGTGCTGGGGCCCATCATCAGGGGGGCTC
ACTATGGAGCTCTCCATCGCCTGTTGGTGCCTGCCCCCCTCTCATGGCCA
TTGTACACGCCTCCATCAACGGCAGCACGTACACGCCATAGGGAGCTCAC
CAAGGAGGTCCAAGCGCGAGCCTGTGACACCCTCCGACTTGCCCTCCTGC
AGTTGCTCCACAACACAGAGGCTGAGGATGGGGCAGGGGCAGCGGCAGGG
CAAGGGGTGGAGGGGCAGACATCGTCCAATTCCTTCGATGCCCCGTCGCT
GGCCTTGTCCTTCTTGCCCAACGTGTTCTTTCTCACCCAAACCCTGGAAG
GTGCCAAGTGCCTCAGGACCATGGCAGTTGCCGGGGGGGAGACAGGAGAG
GTGGCGCTCTCGGCCATCCTTTCCCCGAGCATTTCTCTACAGGGCTCCAG
GGCAATGGGGGAGAGACAGGAGGGGCAGGGAGGGAAGGATCCGTGGATCA
CCAACATAGTGAGAATGCTGGAACCAGAAAACCCCGCCGGGGTCCGCGCT
GCTGGCTGCGCCATCCTCAATGCCCTGGCCACTAGGCCCCCCCAGGAGAG
GTCCTCCGCAGAGCTGAAATGCCGCCTCACTGCTTCTGAC
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