mRNA_D-mesarthrocarpus_Contig97.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig97.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig97.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig97.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig97contigD-mesarthrocarpus_Contig97:7098..8091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size534
Hectar predicted targeting categoryother localisation
Exons2
Cds size534
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791122.4276178-CDS-D-mesarthrocarpus_Contig97:7097..74471680791122.4276178-CDS-D-mesarthrocarpus_Contig97:7097..7447Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig97 7098..7447 -
1680791122.4454064-CDS-D-mesarthrocarpus_Contig97:7907..80911680791122.4454064-CDS-D-mesarthrocarpus_Contig97:7907..8091Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig97 7908..8091 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig97.4.1prot_D-mesarthrocarpus_Contig97.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig97 7098..8091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig97.4.1

>prot_D-mesarthrocarpus_Contig97.4.1 ID=prot_D-mesarthrocarpus_Contig97.4.1|Name=mRNA_D-mesarthrocarpus_Contig97.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=178bp
MKVAESKGMYQESGALEGGVTGAVTGAGDGAGGMGNFGGGWRSADDGGRE
RNLLGDSSRSLGGSSSLDSYHTPRETPWDSQSLAFPTADSYRAPQGSAVN
RASDSGDTTTGSGGVVAPRAESNQSSRSLRAEDLVSSSSGGRYSRGEEGT
SRRREGAMWNPTADNTGIVISSGGGDYG
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mRNA from alignment at D-mesarthrocarpus_Contig97:7098..8091-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig97.4.1 ID=mRNA_D-mesarthrocarpus_Contig97.4.1|Name=mRNA_D-mesarthrocarpus_Contig97.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=994bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig97:7098..8091- (Discosporangium mesarthrocarpum MT17_79)
ATGAAGGTTGCTGAGTCAAAAGGTATGTACCAGGAGAGTGGGGCCCTTGA
AGGAGGTGTGACTGGGGCCGTGACTGGGGCAGGGGATGGCGCAGGAGGAA
TGGGGAACTTTGGGGGGGGTTGGAGGAGTGCTGATGATGGAGGCAGGGAG
AGGAACCTCCTGGGCGACTCATCACGATCACTGGGTAAGTGGGGTAAGAG
AAAGGGGAAGGGTTAAGATTAGGGTTAGGGTTGGGGCTAGGGTTTGGGTT
TGGGTTTGGGTTAGGGTTAAAGTCAGTATTTAGGTGAAGGGGGTGAATAC
CATGGTCTAGGGGCTGATGTAGGGAAGTTGAAGGGGGAATGGATGATGAG
AAGGATCCCAATTGTCACAGATGTCAAGAAGCTCTTGACTATCGAGTGGA
TGTTGGATGTCAACTGTGTATCCATCTCTCTGTGGCCCCTTGGAGACATA
TTTTGTCTGTGCTGTCCTTTCTCTTCTCATGCCTTGCACCTGTGGTGCCC
CTTGCTGCACTGTGTCCAGATATTCACATGCCAATCCCCATCATGGTCCC
CCCTGACCCCCACATTCCCCATGCCATGTGGGCACACTGCCATGCTCCCT
ACCCTTCCCCTCCACACCAAAAACAAACAAAAAAAATTACAAAGGAGGCA
GTTCCAGCCTGGACAGCTACCACACCCCTAGAGAGACCCCATGGGACTCC
CAGAGCCTTGCCTTCCCCACTGCTGACAGTTACAGGGCACCCCAGGGCTC
TGCAGTCAACAGGGCCTCTGACTCTGGCGACACCACCACAGGCTCAGGTG
GGGTGGTGGCGCCCAGAGCAGAGAGTAACCAGAGCAGTCGGTCGCTCCGA
GCTGAAGACCTGGTGAGCAGCAGTAGTGGGGGAAGATACAGCAGGGGTGA
GGAGGGAACAAGCAGGAGGAGAGAAGGGGCCATGTGGAACCCTACGGCTG
ACAATACTGGGATTGTCATTAGCTCTGGGGGTGGTGATTATGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig97:7098..8091-

>mRNA_D-mesarthrocarpus_Contig97.4.1 ID=mRNA_D-mesarthrocarpus_Contig97.4.1|Name=mRNA_D-mesarthrocarpus_Contig97.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=534bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig97:7098..8091- (Discosporangium mesarthrocarpum MT17_79)
ATGAAGGTTGCTGAGTCAAAAGGTATGTACCAGGAGAGTGGGGCCCTTGA
AGGAGGTGTGACTGGGGCCGTGACTGGGGCAGGGGATGGCGCAGGAGGAA
TGGGGAACTTTGGGGGGGGTTGGAGGAGTGCTGATGATGGAGGCAGGGAG
AGGAACCTCCTGGGCGACTCATCACGATCACTGGGAGGCAGTTCCAGCCT
GGACAGCTACCACACCCCTAGAGAGACCCCATGGGACTCCCAGAGCCTTG
CCTTCCCCACTGCTGACAGTTACAGGGCACCCCAGGGCTCTGCAGTCAAC
AGGGCCTCTGACTCTGGCGACACCACCACAGGCTCAGGTGGGGTGGTGGC
GCCCAGAGCAGAGAGTAACCAGAGCAGTCGGTCGCTCCGAGCTGAAGACC
TGGTGAGCAGCAGTAGTGGGGGAAGATACAGCAGGGGTGAGGAGGGAACA
AGCAGGAGGAGAGAAGGGGCCATGTGGAACCCTACGGCTGACAATACTGG
GATTGTCATTAGCTCTGGGGGTGGTGATTATGGG
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