prot_D-mesarthrocarpus_Contig9627.4.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9627.4.1
Unique Nameprot_D-mesarthrocarpus_Contig9627.4.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length114
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.490e-27
Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 0
Query:   10 KVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSGSSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            K+V+KTT DAQFQLLHLSVLREYLW+E T+G++                            A A  L++ER+VDDFVF+TFLVGNDFLPHMPSL+IGEEAFA+LF
Sbjct:  248 KLVMKTTADAQFQLLHLSVLREYLWVEFTLGMSA---------------------------ATASALSLERVVDDFVFITFLVGNDFLPHMPSLDIGEEAFALLF 325          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: D7FME5_ECTSI (5'-3' exoribonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME5_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 4.120e-26
Identity = 60/106 (56.60%), Postives = 69/106 (65.09%), Query Frame = 0
Query:    9 TKVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSGSSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            +KVVVKTTRDAQFQLLHLSVLREY+W E T  +  E                            A  ++ ER+VDDFVFLTFLVGNDFLPHMPSL+IGEEAF++LF
Sbjct:  243 SKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEET---------------------------AAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLF 321          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: A0A7S3ZY69_9STRA (Hypothetical protein n=5 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZY69_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 8.080e-20
Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 0
Query:    1 LVEPPXXXTKVVVKTTRDAQFQLLHLSVLREYLWMELTMG----LAPEVVSFSGSSPGSEEHGEGRGG--GVTLEFAVAG-GLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            L + P      V K +R + FQLLHLS+LREY+ +E         A  + + +   P + ++G GR    G+     V+G  +++ERLVDDFVFLTF VGNDFLPH PSL+IGE AF  +F
Sbjct:  278 LRDTPVNARSTVFKQSRSSDFQLLHLSILREYIQLEFCCSPPASYASHIDARTSVGPRARKNGAGRSNELGIAWRQGVSGRSVDLERLVDDFVFLTFFVGNDFLPHSPSLDIGEHAFNRVF 398          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: A0A8J2WYM1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYM1_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 9.370e-20
Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 0
Query:    1 LVEPPXXXTKVVVKTTRDAQFQLLHLSVLREYLWMELTMG----LAPEVVSFSGSSPGSEEHGEGRGG--GVTLEFAVAG-GLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            L + P      V K +R + FQLLHLS+LREY+ +E         A  + + +   P + ++G GR    G+     V+G  +++ERLVDDFVFLTF VGNDFLPH PSL+IGE AF  +F
Sbjct:  278 LRDTPVNARSTVFKQSRSSDFQLLHLSILREYIQLEFCCSPPASYASHIDARTSVGPRARKNGAGRSNELGIAWRQGVSGRSVDLERLVDDFVFLTFFVGNDFLPHSPSLDIGEHAFNRVF 398          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: A0A7S2YIW8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YIW8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.060e-19
Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 0
Query:   10 KVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSGSSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            K V K T+++ FQLLHLSVLREYL +E    L     + +GS+ G++        G  +++      ++ER +DDFVF+TFLVGNDFLPH+P+L+IG+ AF +LF
Sbjct:   33 KQVKKFTKESNFQLLHLSVLREYLAIEFC--LLGNQGNGNGSANGTD--------GAVVQY------DLERCIDDFVFMTFLVGNDFLPHLPALDIGDNAFDLLF 121          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.530e-18
Identity = 52/105 (49.52%), Postives = 64/105 (60.95%), Query Frame = 0
Query:   10 KVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSGSSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            K V+K T+ + FQLLHLS+LREYL +E   G                    GR G   L     G  ++ERL+DDFVF+TFLVGNDFLPHMPSL+IG+ AF +LF
Sbjct:  248 KSVMKFTKQSDFQLLHLSILREYLQIEFAFG--------------------GRDGIYDLSVK-EGTYDLERLIDDFVFMTFLVGNDFLPHMPSLDIGDGAFDLLF 331          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: A0A7S4EG33_9STRA (5'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG33_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.530e-18
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 0
Query:   10 KVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSGSSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            KVV K T++A FQLLHLSVLREYL++E     AP V                              L++ER +DDFVF+TFLVGNDFLPH+ +L+IGE AF +LF
Sbjct:  246 KVVKKQTKEADFQLLHLSVLREYLYLEFCKDAAPGV------------------------------LDLERTIDDFVFMTFLVGNDFLPHLTTLDIGEGAFDLLF 320          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: A0A7S3L765_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L765_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.810e-17
Identity = 49/105 (46.67%), Postives = 58/105 (55.24%), Query Frame = 0
Query:   10 KVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSGSSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            K V K T+++ FQLLHLSVLREYL ME     A                                  ++ER +DDFVFLTFLVGNDFLPHMPSL+IG+ AF +LF
Sbjct:   23 KEVKKFTKESDFQLLHLSVLREYLAMEFCSDPAIPY-------------------------------DLERCLDDFVFLTFLVGNDFLPHMPSLDIGDGAFDLLF 96          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: A0A448ZS96_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS96_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.430e-17
Identity = 48/105 (45.71%), Postives = 61/105 (58.10%), Query Frame = 0
Query:   10 KVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSGSSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            K+V K T++A FQLLHLSVLREYL++E      P                              G L++ER +DDFVF+TFLVGNDFLPH+ +L+IGE AF +LF
Sbjct:  246 KMVKKQTKEADFQLLHLSVLREYLYLEFCKDAPP------------------------------GTLDLERTIDDFVFMTFLVGNDFLPHLNTLDIGEGAFDLLF 320          
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Match: W7U4G2_9STRA (5'-3' exoribonuclease 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4G2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 8.730e-17
Identity = 50/111 (45.05%), Postives = 61/111 (54.95%), Query Frame = 0
Query:    4 PPXXXTKVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSGSSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHMPSLEIGEEAFAMLF 114
            P       V+K T++A FQLLHLS+LREYL  E    +              EE  E               +++ER+VDDFVFLTFLVGNDFLPH+PSL+I E AF  LF
Sbjct:  239 PGGSSANTVIKQTKEASFQLLHLSILREYLEFEFLRDVP-------------EEERE---------------VHLERIVDDFVFLTFLVGNDFLPHLPSLDISEHAFDKLF 321          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9627.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4G8_9STRA3.490e-2757.14XRN 5'-3' exonuclease N-terminus-domain-containing... [more]
D7FME5_ECTSI4.120e-2656.605'-3' exoribonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
A0A7S3ZY69_9STRA8.080e-2044.63Hypothetical protein n=5 Tax=Pelagomonas calceolat... [more]
A0A8J2WYM1_9STRA9.370e-2044.63Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2YIW8_9STRA2.060e-1946.67Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S4RC29_9STRA1.530e-1849.525'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwell... [more]
A0A7S4EG33_9STRA1.530e-1847.625'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia a... [more]
A0A7S3L765_9STRA1.810e-1746.67Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A448ZS96_9STRA3.430e-1745.715'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia m... [more]
W7U4G2_9STRA8.730e-1745.055'-3' exoribonuclease 1 n=2 Tax=Monodopsidaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041412Xrn1, helical domainPFAMPF17846XRN_Mcoord: 77..113
e-value: 6.0E-16
score: 58.4
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 19..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9627contigD-mesarthrocarpus_Contig9627:3519..4209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9627.4.1mRNA_D-mesarthrocarpus_Contig9627.4.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9627 3519..4209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9627.4.1 ID=prot_D-mesarthrocarpus_Contig9627.4.1|Name=mRNA_D-mesarthrocarpus_Contig9627.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=114bp
LVEPPPPPTKVVVKTTRDAQFQLLHLSVLREYLWMELTMGLAPEVVSFSG
SSPGSEEHGEGRGGGVTLEFAVAGGLNMERLVDDFVFLTFLVGNDFLPHM
PSLEIGEEAFAMLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041412Xrn1_helical
IPR0270735_3_exoribonuclease