mRNA_D-mesarthrocarpus_Contig957.11.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig957.11.1
Unique NamemRNA_D-mesarthrocarpus_Contig957.11.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.120e-19
Identity = 55/116 (47.41%), Postives = 73/116 (62.93%), Query Frame = 1
Query:    4 RLRYVMFVLCSRNTMQKLVDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISDGV-WFDGKIGILPIADTVAAMCSSKNRKKGIMMLKPV 348
            R+++VM  L + ++ Q   DDM + VHVDE WF   K  + +YL P EE P      +KR+ITKV+FL+AVARPR + D V WFDGKIG     + V A  SS+NR  G ++ KPV
Sbjct:   88 RVQWVMKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPHR-TCKSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPV 202          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A6A4Z7D1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7D1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.040e-18
Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = 1
Query:    4 RLRYVMFVLCSRNTMQKLVDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISDGVWFDGKIGILPIADTVAAMCSSKNRKKGIMMLKP 345
            RLRY +  L   +    + DDM+D VH+DE WF + K  R  Y++ E+EA       +KRFITKV+FLAA+ARPR+  +G  FDGKIG+ P  + + A  +SKNR KG ++  P
Sbjct:  163 RLRYAISFLQPLSNGNHIFDDMHDCVHIDEKWFYLTKVKRKFYVY-EDEAVAARFVKSKRFITKVMFLAAIARPRVDFNGNIFDGKIGVWPFVEKLPAKRNSKNRAKGTIVTTP 275          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A6A5A4S1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A4S1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.400e-18
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 1
Query:   58 VDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISDGV-WFDGKIGILPIADTVAAMCSSKNRKKGIMMLKPVRSTR 360
            + ++ ++VH+DE WF + K     YL P E  P   +  +KRF+TKV+FLAAVARPR + D V W+DGKIG  P  +TV A  SS NR  G    KP+  T+
Sbjct:   36 IQELLNYVHIDEKWFYLTKTNLKYYLVPGETVPDR-KCKSKRFVTKVMFLAAVARPRFVEDTVTWWDGKIGTWPFVETVLAQRSSNNRAAGSPETKPITVTK 136          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A4Q9LXX8_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LXX8_9MICR)

HSP 1 Score: 91.3 bits (225), Expect = 2.110e-18
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 1
Query:    4 RLRYVMFVLCSRNTMQKLVDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISDG-VWFDGKIGILPIADTVAAMCSSKNRKKGIMMLKPVRS 354
            RL++ +  +   N    L DD+YD+VH+D+ WF + K  R  YL   EE P+     +KRFITK++F+AAVARPR  +   ++FDGKIGI P      A  +SKNR KG M+ K V S
Sbjct:  120 RLKFCLSKVNLANNGDLLFDDLYDYVHIDKKWFYLTKVKRSYYLMLNEENPER-NCKSKRFITKIMFMAAVARPRYDAHRKLYFDGKIGIWPFVYQAPAQRNSKNRAKGTMITKNVES 236          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A4Q9LWQ4_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LWQ4_9MICR)

HSP 1 Score: 91.7 bits (226), Expect = 2.180e-18
Identity = 54/118 (45.76%), Postives = 72/118 (61.02%), Query Frame = 1
Query:    4 RLRYVMFVLCSRNTMQKLVDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISDG-VWFDGKIGILPIADTVAAMCSSKNRKKGIMMLKPVRS 354
            RL++ +  +   N    L DD+YD+VH+DE WF + K  R  YL   EE P+     +KRFITK++F+AAVARPR  +   ++FDGKIGI P      A  +SKNR KG M+ K V S
Sbjct:  105 RLKFCLSKVNLANNGDLLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEENPER-NCKSKRFITKIMFMAAVARPRYDAHRKLYFDGKIGIWPFVYQEPARRNSKNRAKGTMITKNVES 221          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A485LTD1_9STRA (Aste57867_25464 protein n=4 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD1_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.580e-18
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 1
Query:   55 LVDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISD-GVWFDGKIGILPIADTVAAMCSSKNRKKGIMMLKPVRSTR 360
            +++DM ++VH+DE WF + K  R  YL P E  P+  +  +KRFITKV+FL+AVARPR I D G+W+DGKIG  P  ++V A  +S NR  G    KP+  T+
Sbjct:  161 VMNDMLNYVHLDEKWFYLSKATRTFYLVPGEREPER-KCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPAGTYETKPITVTK 262          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A485LKI0_9STRA (Aste57867_22629 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKI0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.340e-18
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 1
Query:   55 LVDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISD-GVWFDGKIGILPIADTVAAMCSSKNRKKGIMMLKPVRSTR 360
            +++DM ++VH+DE WF + K  R  YL P E  P+  +  +KRFITKV+FL+AVARPR I D G+W+DGKIG  P  ++V A  +S NR       KP+  T+
Sbjct:   48 VMNDMLNYVHLDEKWFYLSKATRTFYLVPGEREPER-KCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPADTYETKPITVTK 149          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A6A4ZIA5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZIA5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.810e-18
Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 1
Query:    4 RLRYVMFVLCSRNTMQKLVDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISDGVWFDGKIGILPIADTVAAMCSSKNRKKGIMMLKP 345
            RLR+ M  L   +       D++D+VH+DE WF + +  +  Y++ E+E        +KRFITKV+FLAA+ARPR+  DG  FDGKIG+ P  + + A  +SKNR KG M+  P
Sbjct:  163 RLRFAMSFLPPSSDGNHFFSDLHDYVHIDEKWFYLTRVKKKFYVY-EDEVVAARFVKSKRFITKVMFLAAIARPRVELDGTIFDGKIGVWPFVEKMPARRNSKNRAKGTMITTP 275          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A1S4DLZ4_TOBAC (uncharacterized protein LOC107831196 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4DLZ4_TOBAC)

HSP 1 Score: 89.7 bits (221), Expect = 8.510e-18
Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:   55 LVDDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAY-NKRFITKVLFLAAVARPRMISDGV-WFDGKIGILPIADTVAAMCSSKNRKKGIMMLKPV 348
            +  DM+++VH+DE WF + K     YL PEE+ P P R+  +K FITKV+F+ AV RPR+  DG   F GKIGI P      A  +SKNR  G + +KP+
Sbjct:   73 IFSDMFNYVHIDEKWFFMSKKSEKFYLLPEEQEPNPYRSCKSKNFITKVMFMVAVVRPRLAKDGTELFSGKIGIFPFVFKEPAKKNSKNRVAGTLEIKPI 172          
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Match: A0A4V2JYF6_9MICR (Uncharacterized protein n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4V2JYF6_9MICR)

HSP 1 Score: 90.1 bits (222), Expect = 2.710e-17
Identity = 53/100 (53.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query:   61 DDMYDWVHVDEIWF*VMKDGRVIYLHPEEEAPKPPRAY-NKRFITKVLFLAAVARPRMISDG-VWFDGKIGILPIADTVAAMCSSKNRKKGIMMLKPVRS 354
            DD+YD+VH+DE WF + K  R  YL   EE  KP R Y +KRFITK++F+AAVARPR  +   ++FDGKIGI P      A  +SKNR KG M+ K V S
Sbjct:  130 DDLYDYVHIDEKWFYLTKVKRSYYLMLNEE--KPERNYKSKRFITKIIFMAAVARPRYDAHRKLYFDGKIGIWPFVYQEPAQKNSKNRAKGTMITKNVES 227          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig957.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4GWE0_9STRA3.120e-1947.41Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6A4Z7D1_9STRA1.040e-1845.61Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A5A4S1_9STRA1.400e-1846.08Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A4Q9LXX8_9MICR2.110e-1844.92Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
A0A4Q9LWQ4_9MICR2.180e-1845.76Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
A0A485LTD1_9STRA2.580e-1847.57Aste57867_25464 protein n=4 Tax=Aphanomyces stella... [more]
A0A485LKI0_9STRA4.340e-1846.60Aste57867_22629 protein n=1 Tax=Aphanomyces stella... [more]
A0A6A4ZIA5_9STRA4.810e-1842.98Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1S4DLZ4_TOBAC8.510e-1846.00uncharacterized protein LOC107831196 n=1 Tax=Nicot... [more]
A0A4V2JYF6_9MICR2.710e-1753.00Uncharacterized protein n=1 Tax=Hamiltosporidium t... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig957contigD-mesarthrocarpus_Contig957:22471..23245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4098.XP_009587210.1
PFAMsHTH_Tnp_Tc3_2
Model size775
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.9e-12
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota,37TMG@33090|Viridiplantae,3GG9M@35493|Streptophyta,44TRN@71274|asterids
Cds size444
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791111.6250875-UTR-D-mesarthrocarpus_Contig957:22470..225781680791111.6250875-UTR-D-mesarthrocarpus_Contig957:22470..22578Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig957 22471..22578 +
1680791111.666734-UTR-D-mesarthrocarpus_Contig957:23022..232451680791111.666734-UTR-D-mesarthrocarpus_Contig957:23022..23245Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig957 23023..23245 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791111.6415517-CDS-D-mesarthrocarpus_Contig957:22578..230221680791111.6415517-CDS-D-mesarthrocarpus_Contig957:22578..23022Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig957 22579..23022 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig957.11.1prot_D-mesarthrocarpus_Contig957.11.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig957 22579..23022 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig957.11.1

>prot_D-mesarthrocarpus_Contig957.11.1 ID=prot_D-mesarthrocarpus_Contig957.11.1|Name=mRNA_D-mesarthrocarpus_Contig957.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=148bp
MKDGRVIYLHPEEEAPKPPRAYNKRFITKVLFLAAVARPRMISDGVWFDG
KIGILPIADTVAAMCSSKNRKKGIMMLKPVRSTRRGTRNSWSISSSPQSR
RECLPTRSHDLCGAGWCKAAQGGGGHGVNSGKGGGQHHPRNPACQFT*
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mRNA from alignment at D-mesarthrocarpus_Contig957:22471..23245+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig957.11.1 ID=mRNA_D-mesarthrocarpus_Contig957.11.1|Name=mRNA_D-mesarthrocarpus_Contig957.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=775bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig957:22471..23245+ (Discosporangium mesarthrocarpum MT17_79)
TTAAGGCTACGCTACGTGATGTTCGTATTATGCTCACGTAACACTATGCA AAAGTTGGTGGACGACATGTACGACTGGGTCCATGTGGATGAGATTTGGT TCTAAGTGATGAAGGACGGGAGGGTGATCTACCTGCACCCAGAAGAGGAA GCCCCCAAACCGCCAAGGGCCTATAACAAGCGATTCATCACCAAGGTGTT GTTCCTTGCTGCTGTGGCGAGGCCTAGGATGATCTCCGATGGGGTGTGGT TCGACGGCAAGATCGGTATCTTGCCCATCGCGGATACTGTGGCGGCAATG TGCAGCAGTAAGAACCGCAAGAAGGGCATTATGATGCTGAAACCAGTAAG GTCAACGCGGAGAGGTACAAGGAACTCATGGTCGATAAGTTCATCGCCGC AATCAAGGCGAGAATGCTTGCCCACCAGGTCACACGACCTTTGTGGAGCA GGATGGTGCAAAGCCGCACAAGGGGGGGGGGGGCATGGAGTCAATTCAGG CAAAGGCGGGGGACAGCATCATCCCCGAAACCCAGCCTGCCAGTTCACCT GACGTCAACGTGAACGATCTTGGATTCTTCCACTCCATCCAGAAGGTGAA GGAGGATGTGAGGGTGTCTCCTCCTGAGGATCTGGTGGAGGCCACAATGG AGGCCATTAATGTCTACCCCCGGGAGATACTAGAACGAGTCTGGCAGAGC CTGTTCGCAGTCCTTGGAGAAGTCCTTGGCTCTAAGGGTGATAATAGCTA CAAGTTGCCCCATTTGGGCAAGGAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig957:22471..23245+

>mRNA_D-mesarthrocarpus_Contig957.11.1 ID=mRNA_D-mesarthrocarpus_Contig957.11.1|Name=mRNA_D-mesarthrocarpus_Contig957.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=444bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig957:22471..23245+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAGGACGGGAGGGTGATCTACCTGCACCCAGAAGAGGAAGCCCCCAA
ACCGCCAAGGGCCTATAACAAGCGATTCATCACCAAGGTGTTGTTCCTTG
CTGCTGTGGCGAGGCCTAGGATGATCTCCGATGGGGTGTGGTTCGACGGC
AAGATCGGTATCTTGCCCATCGCGGATACTGTGGCGGCAATGTGCAGCAG
TAAGAACCGCAAGAAGGGCATTATGATGCTGAAACCAGTAAGGTCAACGC
GGAGAGGTACAAGGAACTCATGGTCGATAAGTTCATCGCCGCAATCAAGG
CGAGAATGCTTGCCCACCAGGTCACACGACCTTTGTGGAGCAGGATGGTG
CAAAGCCGCACAAGGGGGGGGGGGGCATGGAGTCAATTCAGGCAAAGGCG
GGGGACAGCATCATCCCCGAAACCCAGCCTGCCAGTTCACCTGA
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