mRNA_D-mesarthrocarpus_Contig9465.2.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A6H5KGG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG2_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.830e-76 Identity = 118/157 (75.16%), Postives = 134/157 (85.35%), Query Frame = 3
Query: 519 MKAVSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGLVNEIAK 989
M AVS+PT+LDPSLAP GHHIIHAYAA NEPY+ WEG+DR S YK LKEERAEALW+AVER+VPD R AKT L+GSPLTHER+ RRS+GTYGPAFE+GA +P P DIP+ FYSCGDCVFPGVGVPAVAVSGANVAN+CVGPL HL L+N + +
Sbjct: 68 MIAVSLPTLLDPSLAPPGHHIIHAYAAANEPYELWEGLDRRSKEYKDLKEERAEALWEAVERVVPDARKLAKTVLVGSPLTHERFNRRSYGTYGPAFEDGASAFPNPVDIPLENFYSCGDCVFPGVGVPAVAVSGANVANSCVGPLAHLRLINRLQR 224
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A2D2AH49_9PHAE (Prolycopene isomerase-like2 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A2D2AH49_9PHAE) HSP 1 Score: 253 bits (645), Expect = 8.870e-72 Identity = 118/157 (75.16%), Postives = 136/157 (86.62%), Query Frame = 3
Query: 519 MKAVSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGLVNEIAK 989
M AVS+PT+LDPSLAP GHHIIHAYAA NEPY+ W G+DR S YK+LKEERA+ALW+AVER+VPD R AKT L+GSPLTHER+ RRS+GTYGPAFE+GA +PTP D+P+ FYSCGDCVFPGVGVPAVAVSGANVAN+CVGPL+HL LVN + K
Sbjct: 511 MIAVSLPTLLDPSLAPPGHHIIHAYAAANEPYELWAGLDRRSAEYKRLKEERAQALWEAVERVVPDARELAKTVLVGSPLTHERFNRRSYGTYGPAFEDGASAFPTPVDVPLHNFYSCGDCVFPGVGVPAVAVSGANVANSCVGPLRHLRLVNRLQK 667
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: D7FIR6_ECTSI (Carotenoid isomerase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR6_ECTSI) HSP 1 Score: 249 bits (637), Expect = 7.650e-71 Identity = 117/157 (74.52%), Postives = 133/157 (84.71%), Query Frame = 3
Query: 519 MKAVSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGLVNEIAK 989
M AVS+PT+LDPSLAP GHHIIHAYAA NEPY+ WEG+DR S YK LKEERAEALW+AVER+VPD R AKT L+GSPLTHER+ RRS+GTYGP FE+GA +P P DIP+ FYSCGDCVFPGVGVPAVAVSGANVAN+CVGPL HL L+N + +
Sbjct: 483 MIAVSLPTLLDPSLAPPGHHIIHAYAAANEPYELWEGLDRRSKEYKDLKEERAEALWEAVERVVPDARKLAKTVLVGSPLTHERFNRRSYGTYGPGFEDGASAFPNPVDIPLDNFYSCGDCVFPGVGVPAVAVSGANVANSCVGPLPHLRLINRLQR 639
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A2D2AH25_SCYLO (Prolycopene isomerase-like2 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A2D2AH25_SCYLO) HSP 1 Score: 250 bits (638), Expect = 1.450e-70 Identity = 118/157 (75.16%), Postives = 134/157 (85.35%), Query Frame = 3
Query: 519 MKAVSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGLVNEIAK 989
M AVS+PT+LD SLAP GHHIIHAYAA NEPY+ W G+DR S YK LKEERA+ALW+AVER+VPD R AKT L+GSPLTHER+ RRS+GTYGPAFE+GA +PTP DIP+ FYSCGDCVFPGVGVPAVAVSGANVAN+CVGPL+HL LVN + K
Sbjct: 536 MIAVSLPTLLDASLAPPGHHIIHAYAAANEPYELWAGLDRRSQEYKTLKEERAKALWEAVERVVPDARKMAKTVLVGSPLTHERFNRRSYGTYGPAFEDGASAFPTPVDIPLENFYSCGDCVFPGVGVPAVAVSGANVANSCVGPLRHLRLVNRLQK 692
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A7S4JEV9_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JEV9_GUITH) HSP 1 Score: 191 bits (486), Expect = 1.110e-49 Identity = 93/157 (59.24%), Postives = 116/157 (73.89%), Query Frame = 3
Query: 519 MKAVSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGLVNEIAK 989
M +SIPTVLDPSLAP G H++HAY AGNEPYD +EGMDR+SD YK+LK+ERAE L+KAVE+++PD+R R + L+GSPLTHERYLRR GTYGPA+ G +P P + CGD VFPG+GVPAVA SG AN+ V +H+ L+ E+ K
Sbjct: 454 MIVISIPTVLDPSLAPPGKHVVHAYTAGNEPYDLFEGMDRNSDKYKQLKKERAEVLYKAVEKVIPDLRDRIQVELVGSPLTHERYLRRPQGTYGPAWRAGKNLFPGPGLAKVPGLLCCGDSVFPGIGVPAVAASGLTAANSMVSVGEHVELLQEMKK 610
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A7S3XM47_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM47_HETAK) HSP 1 Score: 189 bits (479), Expect = 1.760e-49 Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 3
Query: 507 LTDP--MKAVSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGL 971
+ DP M A+S PT+LDPSLAPEG H+IHAY AGNEPY W R S Y++LK+ER EALW+AVERIVPD+R RAK AL+GSP+TH R+LRR+ GTYGP F+ + +P P IP+ F CGD + PG+GVPAVAVSG N A+T + +HL L
Sbjct: 359 IADPLNMMAISFPTLLDPSLAPEGCHVIHAYCAGNEPYGIWAEHPRGSPEYERLKQERGEALWRAVERIVPDVRQRAKVALVGSPVTHARFLRRADGTYGPVFDLQTQKFPQPDVIPMEGFLCCGDSISPGIGVPAVAVSGMNAAHTLMPVWRHLVL 515
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A351L786_9CYAN (Carotene isomerase (Fragment) n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A351L786_9CYAN) HSP 1 Score: 179 bits (455), Expect = 2.870e-49 Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 3
Query: 528 VSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGLVNEI 983
+SIP+VLDPSLAP G H+IHAY GNEPYD W+G DR S+AY K K+ERAE +WKA+ER++ DIR R + L+G+PLTHER+LRR G+YGPA G +P ++ P+A + CGD FPG+G+PAVA SG ANT KH ++ EI
Sbjct: 68 ISIPSVLDPSLAPAGKHVIHAYTPGNEPYDFWQGSDRKSEAYAKQKQERAEVMWKAIERVIGDIRSRCEVTLVGTPLTHERFLRRHRGSYGPAIRAGEALFPG-SNTPLAGLFCCGDSTFPGIGLPAVAASGMIAANTLAPVQKHWEMLQEI 218
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A7S2I7I6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I7I6_9EUKA) HSP 1 Score: 181 bits (459), Expect = 2.890e-49 Identity = 84/155 (54.19%), Postives = 110/155 (70.97%), Query Frame = 3
Query: 519 MKAVSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGLVNEI 983
M +SIPT+LDP+LAP GHH++H Y A NEPY+ W GM R+S+ Y+ LK ERAE LW+A+E+I+PD+R R T L+ SPLTHER+LRR+ GTYGP G++ P P+ CGD FPG+GVP+ A SG N ANT V PL+ + L+NE+
Sbjct: 104 MVIISIPTLLDPTLAPPGHHVVHVYYAANEPYETWAGMKRNSEEYRALKAERAEPLWRALEKIIPDVRSRVVTELVASPLTHERFLRRTRGTYGPPLFVGSETIPYAA-TPLPGLLHCGDSTFPGIGVPSAAASGMNAANTLVSPLQQVSLMNEL 257
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A7S1E1F7_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E1F7_HEMAN) HSP 1 Score: 177 bits (449), Expect = 4.610e-48 Identity = 84/138 (60.87%), Postives = 104/138 (75.36%), Query Frame = 3
Query: 528 VSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANT 941
+SI +VLDP++APEG H IHAY EPYD W+G+DR+SD YKKLKEER+E LWKAVER++PDIR R +L+G+PLTHER+LRR G+YGPA + G + +P P PI CGD VFPG+G+PAVA SG ANT
Sbjct: 92 ISIASVLDPTMAPEGMHTIHAYTPATEPYDLWKGLDRNSDEYKKLKEERSEVLWKAVERVIPDIRKRCDVSLVGTPLTHERFLRRYRGSYGPAIQAGKQIFPGP-GTPIKNLLLCGDSVFPGIGIPAVAASGMVAANT 228
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Match: A0A250XA45_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XA45_9CHLO) HSP 1 Score: 175 bits (443), Expect = 6.400e-48 Identity = 84/152 (55.26%), Postives = 110/152 (72.37%), Query Frame = 3
Query: 528 VSIPTVLDPSLAPEGHHIIHAYAAGNEPYDPWEGMDRSSDAYKKLKEERAEALWKAVERIVPDIRVRAKTALIGSPLTHERYLRRSFGTYGPAFEEGAKDYPTPTDIPIAKFYSCGDCVFPGVGVPAVAVSGANVANTCVGPLKHLGLVNEI 983
+SI +V DPSLAPEG H +HAY EPY+ W+G+DR S Y+ LKE+R++ LW+AVE+++PDIR RA+ + +G+PLT ERYLRRS GTYGPA + G +P P PI Y CGD FPG+G+PAVA SGA ANT V +HL L++E+
Sbjct: 39 ISIASVKDPSLAPEGKHCLHAYLPATEPYELWKGLDRKSPEYQALKEQRSQVLWRAVEKVIPDIRQRAEMSFVGTPLTQERYLRRSRGTYGPAIKAGEGLFPGPA-TPIKGLYCCGDSTFPGIGLPAVAASGAICANTLVPLSQHLALLDEL 189 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9465.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9465.2.2 >prot_D-mesarthrocarpus_Contig9465.2.2 ID=prot_D-mesarthrocarpus_Contig9465.2.2|Name=mRNA_D-mesarthrocarpus_Contig9465.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=196bp MRSMVTLPCPSPSLHALSSQPRCVPTPTLTDPMKAVSIPTVLDPSLAPEGback to top mRNA from alignment at D-mesarthrocarpus_Contig9465:1402..4704- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9465.2.2 ID=mRNA_D-mesarthrocarpus_Contig9465.2.2|Name=mRNA_D-mesarthrocarpus_Contig9465.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3303bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9465:1402..4704- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9465:1402..4704- >mRNA_D-mesarthrocarpus_Contig9465.2.2 ID=mRNA_D-mesarthrocarpus_Contig9465.2.2|Name=mRNA_D-mesarthrocarpus_Contig9465.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=588bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9465:1402..4704- (Discosporangium mesarthrocarpum MT17_79)back to top |