mRNA_D-mesarthrocarpus_Contig9445.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9445.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9445.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: D8LL50_ECTSI (zf-NOSIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL50_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 9.910e-52
Identity = 108/249 (43.37%), Postives = 147/249 (59.04%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEGEKKRAADQSAFVTGQ--LLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGR--AKRELSQNVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTIDVDKKEVG 735
            K+RLG DSQQ FG+C LC+HP+V+PMATPSGH+YC+ECIV +LL +TQE+KRQR A+EAQ++ +  + +     +R    + FV+ Q  L++T P +T                                    +D GK +GKGKKR R ++    GA  S   G         ++ELSQ  V+K+K+   ++LR TSWWLPQF PE ++  +  P KRP SPMSGEPLR KDLIPV FT+D +KK+  
Sbjct:   33 KVRLGGDSQQTFGHCSLCIHPAVEPMATPSGHVYCKECIVEFLLTKTQELKRQREAFEAQQKDQATDEVSADASRRVEATNDFVSNQQQLVVTKPQAT----------------------------------KPSDSGKSEGKGKKRGR-EEQTGVGADASAPSGKEGKRDHVVEKELSQIAVLKSKKERQDQLRMTSWWLPQFQPEGVKEAIVQPPKRPGSPMSGEPLRPKDLIPVIFTLDSEKKKTA 246          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: A0A836CI14_9STRA (zf-NOSIP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI14_9STRA)

HSP 1 Score: 135 bits (340), Expect = 5.720e-33
Identity = 100/245 (40.82%), Postives = 131/245 (53.47%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEGEKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELSQNVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTIDVDKKEVG 735
            K+R+G DSQ PFG C +C+  + +PMATPSGH+YCRECI+ YLL +T+++KRQRAAYEAQ++A+    +    +K+      FV  Q  +  P          XXXXXXX                      A  GK        RR++       A+   P               V M T+E   E L+ TS+WLP  APEH+E RV  P+ RP SPMSG+PLRAK+LIPV FT+D  K+E G
Sbjct:   26 KVRVGVDSQLPFGNCAMCLRLAKEPMATPSGHIYCRECILEYLLVKTKDLKRQRAAYEAQQQAQAERAVAADAEKQQRSVDKFVKTQGAV-GPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAALGKRAHPEDAERRLESEKKRVMAKMALP---------------VDMTTREQHKEILKRTSFWLPTHAPEHVEERVAPPEARPRSPMSGDPLRAKNLIPVRFTVDGGKEEAG 254          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: A0A812VS04_9DINO (RAD54B protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VS04_9DINO)

HSP 1 Score: 125 bits (315), Expect = 8.300e-28
Identity = 90/263 (34.22%), Postives = 126/263 (47.91%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEGEKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELSQ---------------NVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTI-DVDKKEVGWK 741
             +RLG DS  PF +C+LC   +V+P+ +PSGHMYC+ECI   LL+Q   +K+Q+AA++AQ+  +  E  E      AAD  +F+  +   T+  + G G               AGSV G G S                           V   A  S   G  A GR  RE ++                V ++ ++V   E+  TS+W+P FAPE    RV+ P  RPSSP++G PLRAKDL+PV F + D D+   G K
Sbjct:   40 SVRLGKDSLLPFAHCYLCTQWAVEPLVSPSGHMYCKECIYKNLLSQRAALKKQKAAWKAQQXXDAAETSEAALAAAAADVQSFIDQETNPTAQLARGRG--------------EAGSVLGVGTS--------------------------TVQAAAFASPEEGAAAQGRTLRERAEAEAAQRTAAVQQAHARVDLRDEDVKRREVAATSFWVPSFAPESAPTRVKRPAARPSSPITGAPLRAKDLLPVKFHVEDKDEAAAGGK 262          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: A0A7S2ME80_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME80_9STRA)

HSP 1 Score: 112 bits (279), Expect = 6.540e-25
Identity = 79/248 (31.85%), Postives = 114/248 (45.97%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEGEKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELSQNVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTIDVDKKEVGWKK 744
            + R G DSQ PFGYC L + P   P+ TPSGHMY R+ IV YL  +  E+K+Q   Y+ Q+   E E   +  K   A+   F+ GQ  +                    T G    VS                       KKR+  D+        +D             LS+++   T +   E+L+ TS+W+PQF P+H   R++ P+ RP+SPMSG+PLR KDL P    +D+D +++  KK
Sbjct:    2 RARYGVDSQTPFGYCSLSLSPVDQPVVTPSGHMYSRDVIVEYLATKMSELKQQEVLYKVQQEGLEAEARGDALKTDNAELQGFICGQTSIC-------------------TGGKTSHVS-----------------------KKRKHEDEGAEDQLVIAD-------------LSKDIGDATTK---EQLKRTSFWVPQFTPKHRADRIKKPQPRPASPMSGQPLRLKDLYPADLQVDLDTQKLLDKK 191          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: W7T0X4_9STRA (Nitric oxide synthase-interacting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0X4_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.090e-25
Identity = 86/242 (35.54%), Postives = 129/242 (53.31%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEG-EKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSD---APGPYAVGRAKRELSQNVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTID 714
            K R+GTDSQQPFGYC L + P  DP+ +PSGH+Y RE IV YLL++TQ++KRQR  YE Q+R EE E +E    +++  D   FV  Q      S+  G G  +          +A  +S   + RG                  + + +  +    ARS    +P    V +  + + ++  +KTK+   E++++TS+W+P   PE     +E P  RP SPM+G+PLRAKDL+P+   +D
Sbjct:   69 KTRIGTDSQQPFGYCCLTLRPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYE-QQRGEEQERMEAALNEEKEKDVHRFVERQT-----STFEGQGSSMSKTLRRR---IARDISSR-IVRGTFLSLIV-----------QNQSETRLTDSCARSPCGWSPTHTGVQQLSKVIHRD--LKTKQ---EDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRAKDLLPLPLMVD 284          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: K8YSP8_NANGC (Nitric oxide synthase interacting protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSP8_NANGC)

HSP 1 Score: 109 bits (273), Expect = 2.460e-24
Identity = 76/239 (31.80%), Postives = 110/239 (46.03%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEG-EKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELSQNVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTID 714
            K R+GTDSQQPFGYC L + P  DP+ +PSGH+Y RE IV YLL++TQ++KRQR  YE Q+R EE E +E    +++  D   FV  Q      +ST                                                    ++           P      R  ++    V+ +  +   E++++TS+W+P   PE     +E P  RP SPM+G+PLRAKDL+P+   +D
Sbjct:   29 KTRIGTDSQQPFGYCCLTLKPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYE-QQREEEQERMEAALNEEKEKDVHRFVERQ------TST---------------------------------------------------FEEAAPRQGKHEQNPQEENRQRYIKQQLSKVIHRDLKTKQEDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRAKDLLPLPLMVD 209          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: A0A4D9D4L9_9STRA (zf-NOSIP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4L9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.170e-22
Identity = 78/239 (32.64%), Postives = 117/239 (48.95%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEG-EKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELSQNVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTID 714
            K R+GTDSQQPFGYC L + P  DP+ +PSGH+Y RE IV YLL++TQ++KRQR  YE Q+R EE E IE    +++  D   FV  Q      ++                             +G +Q    +         ++R +                      K++LS+ V+ +  +   E++++TS+W+P   PE     +E P  RP SPM+G+PLR KDL+P+   +D
Sbjct:   29 KTRIGTDSQQPFGYCCLTLKPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYE-QQREEEQERIEAALNEEKEKDVHRFVERQTSTFEEAAP---------------------------RQGHEQNPQEEN--------RQRYI----------------------KQQLSK-VIHRDLKTKQEDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRGKDLLPLPLMVD 208          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: A0A7S2SML4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SML4_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.180e-21
Identity = 75/238 (31.51%), Postives = 104/238 (43.70%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEGEKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELSQNVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTID 714
            ++R G DSQ  FGYC L + P  DP+ TPSGHMY RE ++ YLL + QE KRQ+A +EAQE   + E              AFV+GQ  L +                                                  +KR+R    V       +     A      ELS+ V  ++ +    +L+ TS+W+P+F P H E + + P +RP SPM+G+PLR KDL  V    D
Sbjct:   19 RVRFGVDSQLSFGYCCLSLTPVKDPVVTPSGHMYSREYMLEYLLTKKQEAKRQQALFEAQEAHRQAEXXXXXXXXADEAVKAFVSGQTALGAAEPE----------------------------------------------RKRQRTSSAVDAEVELEEKKAAVA------ELSKAVGTRSTKT---DLKRTSYWVPEFTPVHREEKAKPPPERPPSPMTGQPLRMKDLYDVDLQED 201          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: A0A7S2UPF1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPF1_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.650e-18
Identity = 76/241 (31.54%), Postives = 103/241 (42.74%), Query Frame = 1
Query:    7 RLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEA---QERAEELEGIEEGEKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELSQNVVMKTKEVATEELRETSWWLPQFAPEHLEA--RVEAPKKRPSSPMSGEPLRAKDLIPVTFTID 714
            RLGTDSQQ FGYC L + P+ DP+ATPSGH+Y RE IV YLL +TQ+ K+  AAYE    Q  A+  +  +E E+++ A       G   L+  + +                                                      LVAT                       + ++++E AT  L+ TS+WL +  P   +     E P KRP+SPMSGEPLR KDL P+    D
Sbjct:   32 RLGTDSQQKFGYCCLGLQPAADPVATPSGHIYNREAIVSYLLTKTQDYKKALAAYEGRQTQRSAKRQKLTKEKEEEQLAQFERKNKGASQLSDATHS----------------------------------------------------QALVAT---------------------TQINLESRETATATLKRTSYWLSEMQPAQQDILDTDELPPKRPASPMSGEPLRIKDLTPLDLRTD 199          
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Match: F0XZI5_AURAN (zf-NOSIP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZI5_AURAN)

HSP 1 Score: 94.4 bits (233), Expect = 2.340e-18
Identity = 82/257 (31.91%), Postives = 113/257 (43.97%), Query Frame = 1
Query:    1 KLRLGTDSQQPFGYCFLCVHPSVDPMATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEGEKKRAADQSAFVTGQLLLTSPSSTGGGGPGVXXXXXXXTPGLAGSVSGGGVSRGDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELSQNVVMKTKEVATE---ELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPLRAKDLIPVTFTIDVDKKEVGWKKTQTEKH 762
            + R G+DSQ PFG+C L + P+VDP+ATPSGH+Y RE I+ +L+ +  E+KR R  +EA++ A+          +R  + SA     LLL    +     P V        P                             G KR R+DD            G Y+          N     K  +TE   EL  TS+WLP F PE    ++  P +RP SPM+G PLR+KDL    + +D+ K E    KT    H
Sbjct:    5 EARCGSDSQLPFGWCALSLRPAVDPVATPSGHVYSREAILEHLVTKQAELKRARELWEAEQAAD---------ARREREASARNDETLLLEFEQAND---PLVRDAPAAAKP-----------------------------GPKRARLDD------------GSYS--------HSNFAAPVKTGSTELVAELSRTSYWLPSFTPEAPAKKLAEPPRRPPSPMTGAPLRSKDL----YKLDLRKAESA--KTSRNDH 194          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9445.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL50_ECTSI9.910e-5243.37zf-NOSIP domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CI14_9STRA5.720e-3340.82zf-NOSIP domain-containing protein (Fragment) n=1 ... [more]
A0A812VS04_9DINO8.300e-2834.22RAD54B protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A7S2ME80_9STRA6.540e-2531.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7T0X4_9STRA8.090e-2535.54Nitric oxide synthase-interacting protein n=1 Tax=... [more]
K8YSP8_NANGC2.460e-2431.80Nitric oxide synthase interacting protein (Fragmen... [more]
A0A4D9D4L9_9STRA1.170e-2232.64zf-NOSIP domain-containing protein n=1 Tax=Nannoch... [more]
A0A7S2SML4_9STRA1.180e-2131.51Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2UPF1_9STRA1.650e-1831.54Hypothetical protein n=1 Tax=Attheya septentrional... [more]
F0XZI5_AURAN2.340e-1831.91zf-NOSIP domain-containing protein n=1 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9445contigD-mesarthrocarpus_Contig9445:70..4466 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LL50
Preferred nameNOSIP
PFAMsRtf2,zf-NOSIP,zf-RING_UBOX
Model size1131
Max annot lvl2759|Eukaryota
KEGG koko:K12857,ko:K13125
KEGG Pathwayko03040,map03040
KEGG ModuleM00354,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009314,GO:0009416,GO:0009628,GO:0009639,GO:0009640,GO:0009791,GO:0009892,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016070,GO:0016071,GO:0016567,GO:0016604,GO:0016607,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0031090,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0031984,GO:0032446,GO:0032501,GO:0032502,GO:0032768,GO:0032769,GO:0034641,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048519,GO:0048856,GO:0050789,GO:0050790,GO:0050896,GO:0050999,GO:0051001,GO:0051341,GO:0051354,GO:0061630,GO:0061659,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0090304,GO:0097159,GO:0098588,GO:0098791,GO:0140096,GO:1901360,GO:1901363,GO:1901564
Exons5
Evalue4.87e-39
EggNOG OGsKOG3039@1|root,KOG3039@2759|Eukaryota
Descriptionubiquitin protein ligase activity
Cds size717
COG categoryA
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9445.1.1prot_D-mesarthrocarpus_Contig9445.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9445 145..4115 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791098.6222324-UTR-D-mesarthrocarpus_Contig9445:69..1441680791098.6222324-UTR-D-mesarthrocarpus_Contig9445:69..144Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9445 70..144 +
1680791098.688762-UTR-D-mesarthrocarpus_Contig9445:4115..41601680791098.688762-UTR-D-mesarthrocarpus_Contig9445:4115..4160Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9445 4116..4160 +
1680791098.7075658-UTR-D-mesarthrocarpus_Contig9445:4172..44661680791098.7075658-UTR-D-mesarthrocarpus_Contig9445:4172..4466Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9445 4173..4466 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791098.6386847-CDS-D-mesarthrocarpus_Contig9445:144..2621680791098.6386847-CDS-D-mesarthrocarpus_Contig9445:144..262Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9445 145..262 +
1680791098.6495576-CDS-D-mesarthrocarpus_Contig9445:2027..22211680791098.6495576-CDS-D-mesarthrocarpus_Contig9445:2027..2221Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9445 2028..2221 +
1680791098.6607482-CDS-D-mesarthrocarpus_Contig9445:2773..30191680791098.6607482-CDS-D-mesarthrocarpus_Contig9445:2773..3019Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9445 2774..3019 +
1680791098.6764033-CDS-D-mesarthrocarpus_Contig9445:3956..41151680791098.6764033-CDS-D-mesarthrocarpus_Contig9445:3956..4115Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9445 3957..4115 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9445.1.1

>prot_D-mesarthrocarpus_Contig9445.1.1 ID=prot_D-mesarthrocarpus_Contig9445.1.1|Name=mRNA_D-mesarthrocarpus_Contig9445.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=239bp
MATPSGHMYCRECIVGYLLAQTQEIKRQRAAYEAQERAEELEGIEEGEKK
RAADQSAFVTGQLLLTSPSSTGGGGPGVGPGAGSGTPGLAGSVSGGGVSR
GDDQGSTADKGKWKGKGKKRRRVDDLVATGAARSDAPGPYAVGRAKRELS
QNVVMKTKEVATEELRETSWWLPQFAPEHLEARVEAPKKRPSSPMSGEPL
RAKDLIPVTFTIDVDKKEVGWKKTQTEKHCHETVMKLS*
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mRNA from alignment at D-mesarthrocarpus_Contig9445:70..4466+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9445.1.1 ID=mRNA_D-mesarthrocarpus_Contig9445.1.1|Name=mRNA_D-mesarthrocarpus_Contig9445.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4397bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9445:70..4466+ (Discosporangium mesarthrocarpum MT17_79)
AAGCTGCGCCTAGGAACAGACTCTCAGCAGCCGTTTGGGTACTGCTTCCT CTGCGTGCATCCCAGTGTGGACCCCATGGCCACCCCATCGGGTCACATGT ACTGCCGGGAGTGCATTGTGGGGTACCTCCTGGCCCAGACCCAGGAGATC AAGAGGCAGAGGGCCGCGTACGAGGCTCAGGAGCGGGCTGAAGGCAAGTA CCCTACCCCTTTCATCCTTACCCTGTAAACCCTGCGGCCTAACACCAGCC CTGCGCGCCTCAGGAGTGGGCTGAGGCTGGGAGCCCTGACCCTATGATCC TAACCCTAACCCTAACCCTAACCCTTTACGCAAGACCTCGCAGCACTATC CCTGTAAACCCCTGAGCCTAACCCAAACTCTAAGACTGCCTACAAGGCTC AGTGGTGTGCCAAAGCTAAGAGCCCCAACCGTAAGCCCTAGCCCTGTATA GCGCTGTACCCTCAACCCTACTTCCACAACCCTATTGCTAAACCTGACTG CCTACAAGGCTCAAAACCAGGCTGAGGATAAGCGCCCTTACCCTAACCCT AACCCTACCCTTACGCCGAAGCCTAAGCCTAAGAAAAAAGCCTACACATG AAACCTGTAGCCCTAACCTTACAAAACCCTGACTGTCACCATAACCCTAA GAGACCTGTCTGTATAGCCAAAACCCTTTGAAACCCTGATCCTAACCATA ACCCTAAGAAGACAGCCTACAAGGCGCAGGAAGAGGCCGAGGGTAATAGC CCTAACCCTAACCCAAAGCTCTATATCCCTTACCCTACAGAACCCTGACC CTAACCCTCTACAATCCTAGAGCCCTAACTCTGCGCTGATTACATGGAGG AGACAAGAGGAGACTCCTGTTCCTGATTTTTGTTTTGTCGCATTCTCTAC CCTAACCCTAGCCTAACTGTAACCCTAATCCAATGTGTTCATAGAGAAGG AGGAGATGAGGAGGGGCTGTTTATGAGTCTGCCTTGTCACATTCCTGACC CCAACCCTAGCCTTAAATGTAACATTACACCAATGTGTTCATAGAGAAGG AAGAGATGAGGAGGGGCTGTTTATTTGTCTGCCTTGTCACATTCCTGACC CCAACCCCGACATCAACCCTAACATATACCCCAACCTCAACCCTTACCCC AACCTTAACCCCAACCCCAGCCCAACTCTGTTGCCTGTATAACACGTACT ACCAAGTGGGGATGTAACCCTAACCCTAACCTTAACCCCAACCCCAGCCC TAACTCTGTTACCTGTATAACACATACTACCAAGTGGTGATGTAAGCCTA ACCCTAACCTTAACCCCAACCCCAGCCCTAAGTCTATTACCTGTATAACA CATACTACCAAGTGGTGATGTAAGCCTAAACCCAACCTTAACCTCAACTC CAGCCCTAACTCCGTTACCTGTATAACACATACTACCAAGTGGTGATGTA ACCCTAACCCTGACCTTACCCTAACCCTAACCCTAACCTTAACCCTAACC CTAACCCTAACACGAAACCCCCAACCCTGTGCATTAAGCTGAGCTGGAGG GCATTGGGTAGGGCGAGAAGAACCCTAACCTTGACCCTTTCCCTAACCCC TAACCATAAAACCCCAGCCCATGCAACAAACCCAGAGCTGGAGGGTATTG AGGATGGTGAAAAGAACACTAGCCTCAACCCCAACCCCAACCCCAGTCCT AACCCCAATTCTAACCCTAAACCCTAACCCTAACCCTAACCCTAAACCCC AACCCCAACCCCAATCCTAACCCCAATTCTAGCCCTAAACCCTAACCCTA AACCCTAACCCTAACCCTAACCCAAACCCTAACCCCAAACCCTAACCCCA AATACTAGACTCTAGACCCTAACCCTAACCCTAACCCAAACCCTAACCCC AAACCCTAACCCCAAATACTAGACTCTAGACCCTAACCCTAACCGTAATA ATGCACAGAGCTGGAGGGCATTGAGGAGGGTGAGAAGAAAAGGGCTGCTG ACCAGTCCGCCTTTGTCACCGGGCAGCTCCTCCTCACAAGCCCCTCCTCG ACTGGTGGTGGTGGCCCAGGGGTGGGGCCGGGGGCAGGTTCAGGCACTCC GGGGCTGGCGGGGTCCGTTTCCGGTGGTGGCGTCAGTAGGGGTGATGATC AGGTATATAGTGCACTGTAGTATCTTGGGGTTAGGGTTAGGGTTACGGAA CTACTTGGAAGTGCATGCTAAGCAGGGGTTAGGAACGACAATATGGGCAC TCCTGAATGTGCAACAAAGTTGAAGTTGAAGCTGAGTTGAGTAAGAATAA GTGAGGGTTAGGGTCAAAGTTAAGGTTAGGGTTAGGGTCAGGCGTTAAGT GCTACACGCTGGGCACTGCAAAAGAAGGGGGGGGAAGCGCAAAAATGCCA ACCAAACTCATCAAAAACCCAACCCTCACCCTACGGCCCCAGCCGTAACC CCTACCCCTAGCCCTAACCCCTACTATCTCTAACCCCTACCCCTAGCCAT AACCCTACCCCTAGCCGTAACTGTACTCCTAGCCGTAACTGTACTCCTAG CCGTAACTGTACCCCCCAGCTCTAATGCCCACACTCTAGCCCTAACTGTA ACCCCTAGCCCTAACCCTAACTTCTAGCCCTAGGCCCTACCCCTAGCGCT AACCCAAGCCTCTAATCCTAAACCCTAACCCTAACCATAACCATAACCCT ACAGGGCAGCACGGCAGACAAGGGCAAGTGGAAGGGGAAGGGAAAGAAGA GGAGGAGGGTGGATGACCTGGTGGCCACAGGGGCTGCCCGTAGTGACGCC CCGGGCCCTTACGCAGTGGGGAGGGCCAAGAGGGAGCTGAGCCAGAATGT GGTGATGAAGACCAAGGAGGTTGCCACTGAGGAGCTGAGGGAGACCAGTT GGTGGCTACCCCAGTTTGCCCCAGAGCACCTGGAGGCCAGGGTGGAGGCG GTGAGGCATGATATTGTGACAGCGATAGCAAGAAACATCTTTAGGGTTAG GGTTAGGGCCAGGGCTTCACAAAAGTACTCTGAAGCATGACTTTTTTTTA GGGTTAGGGTTAGGGTTAGTTAGAGTTAGGGTTTGAGATGATGTGTGTAG CAGCAGTATACAGTACCAAGTATTTAGGGTTAGGGTTAGGGTTGAGTGCA AGTAGAAAAGAGGTGTGGTCGGGGGTTAGAGCCTTGGGCTGGGCTCTCCC TGGAGCGCCTGGAGGTTGAAGGGAGTTTTGATATGTATGAATATACTGTG ATGGCGAGAAAGGAGGATTAGGGTTTATAGTGAAACTTAGTACTGGAGCA CATGGAGGCTAAGGTAGAGGCGGTGAGGGATGATTTGTATAGTGACAGTA AGAAAGAGGAAGGGTTGGGATTAGTGTTTGCCCCAGAGCACCTGGAGTCC AGGATGGCAGTCAGTGACAGGGATAGGAAGCGAAAGGGAGGATTAGGGCC AGGGTTGTCGAGGTAGGGCAAGGGTTGGGGTATGGTGGAGGACGGGTCGC TTGGGATGCCTCCAAGTGAAGTATTCTCCCATACACTTGGTATATTCATG TGTTTCAGAGCTGTACAAGAGTGGTTCAAGGTAGAATGTATTTGATTTTT TGGTTTAGGGTTGGGGTTAGGGCTAGTACTTAGGGTTATGGCTAGTACTT TCAAGTATTCTTCGAATATGCATTTGAGAGTGTTTAGGGTTAGGTTAGGG TTCTTCCCTGTCTGCCCTTTGTGCAATACATCCATAATTCCTTCACTCCC CCTGCAGCCCTCTAAGCTTTAGCCCTAATCCCTAACCCTAGCTCTACATT CTAATCCCTAGGCTGACTCCTTTACTCTAGACCCTAAGACCCAAACCTAA CCTTATCCCCTTCCCCCCTTCTTAAATTCAAAAACAGCCCAAGAAACGGC CAAGCAGTCCCATGTCTGGAGAACCCCTCCGTGCCAAGGACTTAATACCG GTGACCTTCACCATCGACGTGGACAAGAAGGAGGTGGGTTGGAAAAAAAC ACAAACCGAAAAACACTGTCATGAAACTGTCATGAAACTGTCATGAAACT GTCATGAAACTGTCATGAAAATGGTGACCCTCACTGTCGACGTAGACAAG GAGGAGGTGGGCCAGCATAGACAAGGAGGCAGGTCAAAGGACCAGGGAGT GAAGGGACCAGAGAAGAATGACACCAACAAAAAACCAACAATAAACCGAC ACAAGACTGCCACAAAATTGAAGGGGGGGACAAGGACTGAGAAGAAAAAT AACTGTAAACTGAGAAGAATCAAACTGCTTTGGAACCGCAACTGAGGCGG ACACAAGATGCCGTGCCGCGTCTGTGGTCCACTCCACTGCACTGTGGTTG TGCACAGGGGGATGGGGTCAGAAATTTGCTGCCTCTAACCCTCACCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9445:70..4466+

>mRNA_D-mesarthrocarpus_Contig9445.1.1 ID=mRNA_D-mesarthrocarpus_Contig9445.1.1|Name=mRNA_D-mesarthrocarpus_Contig9445.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=717bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9445:70..4466+ (Discosporangium mesarthrocarpum MT17_79)
ATGGCCACCCCATCGGGTCACATGTACTGCCGGGAGTGCATTGTGGGGTA
CCTCCTGGCCCAGACCCAGGAGATCAAGAGGCAGAGGGCCGCGTACGAGG
CTCAGGAGCGGGCTGAAGAGCTGGAGGGCATTGAGGAGGGTGAGAAGAAA
AGGGCTGCTGACCAGTCCGCCTTTGTCACCGGGCAGCTCCTCCTCACAAG
CCCCTCCTCGACTGGTGGTGGTGGCCCAGGGGTGGGGCCGGGGGCAGGTT
CAGGCACTCCGGGGCTGGCGGGGTCCGTTTCCGGTGGTGGCGTCAGTAGG
GGTGATGATCAGGGCAGCACGGCAGACAAGGGCAAGTGGAAGGGGAAGGG
AAAGAAGAGGAGGAGGGTGGATGACCTGGTGGCCACAGGGGCTGCCCGTA
GTGACGCCCCGGGCCCTTACGCAGTGGGGAGGGCCAAGAGGGAGCTGAGC
CAGAATGTGGTGATGAAGACCAAGGAGGTTGCCACTGAGGAGCTGAGGGA
GACCAGTTGGTGGCTACCCCAGTTTGCCCCAGAGCACCTGGAGGCCAGGG
TGGAGGCGCCCAAGAAACGGCCAAGCAGTCCCATGTCTGGAGAACCCCTC
CGTGCCAAGGACTTAATACCGGTGACCTTCACCATCGACGTGGACAAGAA
GGAGGTGGGTTGGAAAAAAACACAAACCGAAAAACACTGTCATGAAACTG
TCATGAAACTGTCATGA
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