mRNA_D-mesarthrocarpus_Contig10187.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10187.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig10187.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: D8LMU3_ECTSI (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU3_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 6.360e-70
Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = 1
Query:   37 RSALDLARSGWYNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTSALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRSNSESIRF 486
            RSA+DLARSGWYNK+VMAIVRPPRC YS GDLG E   + SGL+M+R DF V+N+RGL+LVCSQWRP+F EDTS LPCVVYLHGNSSARVD++KT  L VL TA CTVV+FDFSGSGMSEG++VTLGYFEQHDVADVLAYLRSN  + R+
Sbjct:  226 RSAIDLARSGWYNKIVMAIVRPPRCKYSIGDLGNEVTPLSSGLAMKRRDFEVRNQRGLKLVCSQWRPAFTEDTSKLPCVVYLHGNSSARVDVVKTSSLRVLGTAACTVVSFDFSGSGMSEGDFVTLGYFEQHDVADVLAYLRSNGMASRY 375          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A6H5JRH5_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH5_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 8.420e-70
Identity = 114/150 (76.00%), Postives = 131/150 (87.33%), Query Frame = 1
Query:   37 RSALDLARSGWYNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTSALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRSNSESIRF 486
            RSA+DLARSGWYNK+VMAIVRPPRC YS GDLG E   + SGL+M+R DF ++N+RGL+LVCSQWRP+F EDTS LPCVVYLHGNSSARVD++KT  L VL TA CTVV+FDFSGSGMSEG++VTLGYFEQHDVADVLAYLRSN  + R+
Sbjct:  281 RSAIDLARSGWYNKIVMAIVRPPRCKYSVGDLGNEVTPLSSGLAMKRRDFEIRNQRGLKLVCSQWRPAFTEDTSKLPCVVYLHGNSSARVDVVKTSSLRVLGTAACTVVSFDFSGSGMSEGDFVTLGYFEQHDVADVLAYLRSNGMASRY 430          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A835YYX8_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX8_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.210e-52
Identity = 95/152 (62.50%), Postives = 117/152 (76.97%), Query Frame = 1
Query:   31 KKRSALDLARSGWYNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTSALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRSNSESIRF 486
            +K+ A+   R+G YN LVMAIVRPPRC Y++ DLG   + VG GL + R DF V NRRG+ L CSQWRPSFV+ T ALPCVVYLHGNSSARVD+++T+ L+ L +   ++VAFDFSGSG+S G++VTLG  EQHDVADVLAYLRS   + RF
Sbjct:  191 QKQGAIKQLRTG-YNALVMAIVRPPRCCYAERDLGPWALSVGGGLVLHRRDFPVVNRRGVALACSQWRPSFVDATGALPCVVYLHGNSSARVDVVRTRALTALASMGASIVAFDFSGSGLSGGDFVTLGGNEQHDVADVLAYLRSECMASRF 341          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A7R9VXE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXE1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.910e-30
Identity = 64/133 (48.12%), Postives = 88/133 (66.17%), Query Frame = 1
Query:   70 YNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTSA-LPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRS 465
            Y +LV AI+RPPR  Y + +LG        G    R DF ++ +RGL L CS W P  VE TS+ +P V+Y+HGNSSARV+++    LS L +    V AFDF+GSG S+GE+V+LGYFE+ D+  V+A+LR+
Sbjct:    2 YQELVNAIIRPPRAQYKEENLGPPAFSF-CGRRFTRTDFTLRTKRGLNLQCSHWEP--VERTSSRIPVVIYMHGNSSARVEVLPQ--LSYLLSLGVAVFAFDFAGSGKSDGEYVSLGYFEREDLMCVIAHLRA 129          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A7S2SL50_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SL50_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.920e-29
Identity = 67/145 (46.21%), Postives = 93/145 (64.14%), Query Frame = 1
Query:   34 KRSALDLARSGWYNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTSALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRSN 468
            K S   L R G YN LV AI+RPPR  Y  G LG E   V  G    R D  + N+RGL+L CS W+P   + T A PC+VYLHGN+S R + ++   L ++ ++  T+ A DF+GSGMSEGE+++LG+FE+ DV  V+ +LR++
Sbjct:   47 KVSYWQLVRGG-YNDLVNAIIRPPRAEYDMGVLGPEVFTV-DGRVFTRQDIELVNKRGLKLACSHWKPK--DQTGAKPCMVYLHGNASCRAEALEC--LPLILSSGLTLFALDFAGSGMSEGEYISLGWFEREDVQVVVEHLRNS 185          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A7S1BAY4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAY4_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.200e-28
Identity = 71/148 (47.97%), Postives = 93/148 (62.84%), Query Frame = 1
Query:   31 KKRSALDLARSGWYNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTS-ALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRSNS 471
            KK   + +AR G Y +LV AI+RPPR  Y    LG        G    R DFV+Q  RGL L CS W P  VE T+  +P V+Y+HGNSSARV++I    LS L +    V +FDF+GSG S+GE+V+LGYFE+ D+  V+A+LRS +
Sbjct:  144 KKLGYVQMARMG-YQELVNAIIRPPRADYKVESLGPPAFTF-CGRRFTRTDFVLQTSRGLALQCSHWEP--VERTADRIPAVIYMHGNSSARVEVIPQ--LSYLLSLGVAVFSFDFAGSGKSDGEFVSLGYFEREDLMSVVAHLRSTN 285          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A836CG95_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG95_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.300e-28
Identity = 62/133 (46.62%), Postives = 87/133 (65.41%), Query Frame = 1
Query:   76 KLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTSALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRSNSE 474
            +LV AI+RPPR  YS G LG       +G + RR DF + N RG+ L CS W P        LPCVVYLHGNSSAR + +    L+++ +   T++AFD SGSGMS+GE+V+LGY+E+ D+  V+ +LR++ +
Sbjct:    2 ELVNAIIRPPRARYSIGSLGPRKFKF-NGRAFRRSDFELTNPRGMALKCSHWEPDGWRVAEQLPCVVYLHGNSSARPEALPQ--LALVLSLGATLLAFDCSGSGMSDGEYVSLGYWERDDLGAVINHLRASGD 131          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A812SET8_9DINO (YqkD protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SET8_9DINO)

HSP 1 Score: 117 bits (294), Expect = 6.750e-28
Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = 1
Query:   34 KRSALDLARSGWYNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVE--DTSALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRSNSE 474
            KRS +    SG Y  +V AI+RPPR  Y   +LG    ++  G   +R D  + N +GL L CS WRPS  E    S LPCVV LHGNSS R++ ++   + ++ T   ++ AFDF+G G+SEG+++TLGY E+ DV+ V++YLR + E
Sbjct:   25 KRSCVPF--SGTYESIVEAIIRPPRAPYEASNLGPSKFLL-YGHVFKRFDLQITNPQGLTLECSWWRPSNRELISESPLPCVVCLHGNSSCRLEALQH--VRMVLTRGISLFAFDFAGCGLSEGDYITLGYHEREDVSTVISYLRDSGE 168          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A7S2KEW0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KEW0_9DINO)

HSP 1 Score: 114 bits (284), Expect = 8.840e-28
Identity = 72/164 (43.90%), Postives = 91/164 (55.49%), Query Frame = 1
Query:    7 GSRGGGGSKK--RSALDLARSGW-------YNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQW---RPSFVEDTSALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLR 462
            G  GGGG+ K  R A   +   W       YN L   I+RPPR  Y+  DLG     +G  +  RR D  + N RGLRL CS W    P   + T+  PCVVYLHGN S+R++   T  L VL     TV A D SGSG SEGE+++LG+FEQHD+   + +LR
Sbjct:    2 GQNGGGGAAKFKRGATLESDISWHSIVTDTYNLLWKLIIRPPRSAYAVEDLGPRKFRLGKQIFERR-DLQLTNDRGLRLECSHWVPLDPELDQGTNQYPCVVYLHGNCSSRLESSDT--LKVLLPKGITVFALDLSGSGRSEGEYISLGWFEQHDLRTAVRHLR 162          
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Match: A0A7S2G2Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2Q1_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.100e-27
Identity = 61/133 (45.86%), Postives = 85/133 (63.91%), Query Frame = 1
Query:   70 YNKLVMAIVRPPRCTYSQGDLGQETVVVGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTSALPCVVYLHGNSSARVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVLAYLRSN 468
            Y +LV AI+RPPR  Y    LG +    G     +R DF ++N RG+R VCS W P      + LPCV+Y+HGNSSARV+ +    LS+      T+ AFDFSGSG S+GE+V+LG+FE+ D+  V+ +LR++
Sbjct:   45 YQELVNAIIRPPRADYDDAHLGPKQFYFGKE-KFQRTDFELRNERGMRFVCSHWEP-MNRRAAELPCVIYMHGNSSARVEAVPQ--LSLCLALGATMFAFDFSGSGRSDGEYVSLGFFEREDLKVVVDFLRAS 173          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10187.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMU3_ECTSI6.360e-7076.67Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JRH5_9PHAE8.420e-7076.00Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
A0A835YYX8_9STRA2.210e-5262.50Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A7R9VXE1_9STRA7.910e-3048.12Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2SL50_9STRA3.920e-2946.21Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S1BAY4_9STRA2.200e-2847.97Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A836CG95_9STRA4.300e-2846.62Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A812SET8_9DINO6.750e-2843.62YqkD protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A7S2KEW0_9DINO8.840e-2843.90Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A7S2G2Q1_9STRA1.100e-2745.86Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10187contigD-mesarthrocarpus_Contig10187:1430..3660 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LMU3
PFAMsHydrolase_4
Model size736
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.04e-70
EggNOG OGsCOG1073@1|root,KOG1552@2759|Eukaryota
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-02_003660.1
Descriptionpalmitoyl-(protein) hydrolase activity
Cds size735
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789161.6439447-CDS-D-mesarthrocarpus_Contig10187:1429..18311680789161.6439447-CDS-D-mesarthrocarpus_Contig10187:1429..1831Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10187 1430..1831 -
1680789161.6571527-CDS-D-mesarthrocarpus_Contig10187:2555..27301680789161.6571527-CDS-D-mesarthrocarpus_Contig10187:2555..2730Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10187 2556..2730 -
1680789161.6690218-CDS-D-mesarthrocarpus_Contig10187:3502..36601680789161.6690218-CDS-D-mesarthrocarpus_Contig10187:3502..3660Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10187 3503..3660 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10187.1.2prot_D-mesarthrocarpus_Contig10187.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10187 1430..3660 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10187.1.2

>prot_D-mesarthrocarpus_Contig10187.1.2 ID=prot_D-mesarthrocarpus_Contig10187.1.2|Name=mRNA_D-mesarthrocarpus_Contig10187.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=245bp
STGSRGGGGSKKRSALDLARSGWYNKLVMAIVRPPRCTYSQGDLGQETVV
VGSGLSMRRVDFVVQNRRGLRLVCSQWRPSFVEDTSALPCVVYLHGNSSA
RVDIIKTKLLSVLCTARCTVVAFDFSGSGMSEGEWVTLGYFEQHDVADVL
AYLRSNSESIRFASTPSPPMCFVCSLPTNVFHLFTPHLRVSFIPPLALIL
PRSGICCPSPPPPILSLTMCCSWIVLQLCSATLLKKRFTKSDLAP
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10187:1430..3660-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10187.1.2 ID=mRNA_D-mesarthrocarpus_Contig10187.1.2|Name=mRNA_D-mesarthrocarpus_Contig10187.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2231bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10187:1430..3660- (Discosporangium mesarthrocarpum MT17_79)
AGCACCGGGTCCAGGGGGGGGGGGGGAAGCAAAAAGAGGTCTGCCCTTGA CCTTGCCCGGTCTGGCTGGTACAACAAGCTCGTCATGGCCATCGTCCGCC CCCCACGGTGCACCTACAGTCAGGGGGACCTGGGGCAGGAGACTGTTGTG GTGGGCAGGTCAGTCTCATTCGCCTGCTTCAAGTGCGCTGCTTGGTGTGA ACTATATTACCTTGCAAGTAGTTCTCTCTTGCCTCATTTTCTGGCGTGAT CTGAAGGTGCTTCTTCCTGGGGGAGCGAGAGAGGGGTGAAGCGTTAGGGT TAGGTAGGGACATGGCTGGGGCCAGGGCTGGGGCTAGAGCTAGGGTCAGG GCCTTAGGGTGGGGGTGGTTGCTTACTGTTGTTGTCGGGGCGGGTGGTTG GGTGGGTAAGTGGGTGGGGGGGAACTCCTTGGTGTTGGCTGTTCCCTCGT TTAGAGACCTGGCGAAATGGTTTGCTGGGGCCCTTGGTGTGCCAGATGAG CTCCATCAGCCAGCACAGGAACAACCCATATTGTACAGCTTACATAGTAC AGAAGTGAAGGGACACTGCTGTAATGTACTGTCTGGTCTCTTCCGTTTTG CCTATGTCTTGTCATCTCCTGTTTCGTCCGATCTGTCTTGTCTCCTCTTC CCTGTCTTCTCATGTCTTTTGTCACCTATGCCATGGCAAAAAAAAAGAAA AAAAGAAGAAAAAGGCAAAAAAAACTGCATTGATGTCTCTGCTTTAAGGA GGGAGATGGGGGCTACACACCCCAAGCAGAGCTTAGCCTGGAAATCCTCC CCTTCCCACTCTTTCATTGACCCCCTGCTCCCTCCCACCCTCCCTCCCTC ACCCCCTCCCAATCCCCTAACCCTTTCATCCTCCTCCCCTTCCCACCCCC CCCATGTCCCCCCATTCCCCCGCACTTCAGTGGCCTGAGCATGAGGAGAG TGGACTTTGTAGTGCAGAACAGGCGGGGGCTGAGGCTGGTTTGCAGCCAA TGGCGCCCGTCGTTTGTGGAGGACACCTCCGCCCTCCCCTGTGTGGTGTA CCTGCATGGGAACAGCTCTGCCAGGGTGGACATTATCAAGACCAAGCTCC TCTCGGTGAGGGGGGAGAGGGAGGGGCGGGGGTGGGGGGTGTCGGGTGAT GGTTTTTTTACAGGTTGGTGAAGTATGGATTTGAGGGTGCTTTTCTTTAT CTCTCTGGGCCGGTGCGTAGGGCTTACAGTTTTGTTCCTTATGTGAGGCT GCTGTTTCCCTTCCCCCTTTTAGACAGGACAGGTGGGGGACAGACAGGGC AAGATCCATCAGCAGCGCTGAGTACTCTGCTGGGTGTTGTCTTGTTTGGC CGTACAAGAATTTCATTGGAATACTATGGGAGACTATGGTGTTGCAAACG TGTTGAGCGCAAGTTGAACTTCTTCCCCTCTCCTCGCAGTCCCGTTTTTT TTTTTTGCATGTGTGTGTATTTTTTTTGTGGAATGTAAAAACTTTGTTGC AGGGTTATTCTTGTGTTCCCTTTGCCTCGCCCTCATGTCCCCTTCACTCC ACTCCACTACCTACGTGAGTGGGCAACACCCAGAGCCTGTAAAATAGCTC TGGGCGATACCCACCCGAGTGTACCACCCTCGTTCCTTTGAACAAAAAAG AGACCGCCTCCCTTGTACTACAAACCACTACAAAGTGCTGTAAAGTGCTA AGAGGTGCCACGCACTAAATGATGAAGTAGGACTGGTACAATTCCTGCTT TTCCCCTTCCCCCGCCGGTGCCCTGTGCCGGCACTCCACTCCTTCCTCCT CTCTCTGATCTCTGCCCGGCGCTCATCAGGTCTTGTGCACGGCACGGTGT ACAGTGGTCGCGTTTGACTTCTCTGGTTCGGGCATGTCAGAGGGGGAGTG GGTCACCCTTGGGTATTTCGAACAGCACGACGTGGCTGACGTTCTCGCTT ACCTCCGCAGCAACAGTGAGTCGATTCGATTTGCCTCAACACCCTCCCCA CCTATGTGTTTCGTTTGTTCACTCCCCACCAATGTGTTTCATTTGTTCAC TCCCCACTTACGTGTTTCATTTATTCCCCCCCTTGCCCTTATCCTACCTC GTTCAGGAATCTGCTGCCCTTCCCCCCCTCCCCCCATCCTATCCCTGACC ATGTGCTGCTCTTGGATCGTTCTTCAGCTGTGTTCTGCCACCCTGTTGAA AAAAAGATTTACAAAAAGTGATCTCGCACCC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10187:1430..3660-

>mRNA_D-mesarthrocarpus_Contig10187.1.2 ID=mRNA_D-mesarthrocarpus_Contig10187.1.2|Name=mRNA_D-mesarthrocarpus_Contig10187.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=735bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10187:1430..3660- (Discosporangium mesarthrocarpum MT17_79)
AGCACCGGGTCCAGGGGGGGGGGGGGAAGCAAAAAGAGGTCTGCCCTTGA
CCTTGCCCGGTCTGGCTGGTACAACAAGCTCGTCATGGCCATCGTCCGCC
CCCCACGGTGCACCTACAGTCAGGGGGACCTGGGGCAGGAGACTGTTGTG
GTGGGCAGTGGCCTGAGCATGAGGAGAGTGGACTTTGTAGTGCAGAACAG
GCGGGGGCTGAGGCTGGTTTGCAGCCAATGGCGCCCGTCGTTTGTGGAGG
ACACCTCCGCCCTCCCCTGTGTGGTGTACCTGCATGGGAACAGCTCTGCC
AGGGTGGACATTATCAAGACCAAGCTCCTCTCGGTCTTGTGCACGGCACG
GTGTACAGTGGTCGCGTTTGACTTCTCTGGTTCGGGCATGTCAGAGGGGG
AGTGGGTCACCCTTGGGTATTTCGAACAGCACGACGTGGCTGACGTTCTC
GCTTACCTCCGCAGCAACAGTGAGTCGATTCGATTTGCCTCAACACCCTC
CCCACCTATGTGTTTCGTTTGTTCACTCCCCACCAATGTGTTTCATTTGT
TCACTCCCCACTTACGTGTTTCATTTATTCCCCCCCTTGCCCTTATCCTA
CCTCGTTCAGGAATCTGCTGCCCTTCCCCCCCTCCCCCCATCCTATCCCT
GACCATGTGCTGCTCTTGGATCGTTCTTCAGCTGTGTTCTGCCACCCTGT
TGAAAAAAAGATTTACAAAAAGTGATCTCGCACCC
back to top