mRNA_D-mesarthrocarpus_Contig9338.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9338.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig9338.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: D7FQV1_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV1_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 1.950e-61
Identity = 174/439 (39.64%), Postives = 220/439 (50.11%), Query Frame = 1
Query:    1 LMKGIGMGIVDTCLSGFNTCLFAYGQTGSGKTFTMMGYDSMPKPHLPSNSLGVPLPATPSTGSAIMSHAAQDSVCEVDRGGAGSESNPCSADHKTEPGMEEEPAPLHFSPWQKSRDCLEPKLSSENSATAPSPGGGEGENTPWTSATEAEDRKGGREGSVATALGPXXXXXXXXPPSVQRLLEGNMALPHTSSSPHGLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDN-RPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAAAGSGAESCGPGTQPLSPSSPRRSDATSMGIAASDXXXXXXSPL 1314
            + +GIG G+V+ CL+GFNTCLFAYGQTGSGKTFTMMG                  P+ P+   AI     + +V E                      ME++   +           LEP+  + ++A A                 E++ +    E +  TA                   E N      +  P  +                G +EG   +  +A +   GV G   G+ T+W+  VSFTEIY+E+VRDLL+ + R + +LKVREHP +GPFV GV    V++A E + LLVEGQ RR VAGTNMNETSSRSHAIF +     + D +TGAEG T SKV NLVDLAGSEN+N AGS G RLKEGAAINKSLLTLGRVIKAL  A+  G     P       SSPR+S+    G A  D       PL
Sbjct:  132 VFEGIGQGVVENCLAGFNTCLFAYGQTGSGKTFTMMGAG----------------PSGPAAAKAI-----EATVIET---------------------MEQQVRAVTPPXXXVEIMALEPQQQASDAAVA-----------------ESDTQ----EATTVTA-------------------EANATAGVVTGGPEAI----------------GEVEGSTRAGNNAVNSSAGVLGKQSGVSTRWTFSVSFTEIYMERVRDLLDTSGRANQNLKVREHPTKGPFVEGVVTARVTTARETERLLVEGQARRAVAGTNMNETSSRSHAIFTIVATKVERDLQTGAEGYTTSKV-NLVDLAGSENANTAGSAGTRLKEGAAINKSLLTLGRVIKALVDASTEGRPRVIPS------SSPRKSEQRLPGNAGVDESLPDPLPL 465          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: A0A6H5KU80_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU80_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 4.580e-50
Identity = 172/461 (37.31%), Postives = 220/461 (47.72%), Query Frame = 1
Query:    1 LMKGIGMGIVDTCLSGFNTCLFAYGQTGSGKTFTMMGYDSMPKPHLPSNSLGVPLPATPSTGSAIMSHAAQDSVCEVDRGGAGSESNPCSADHKTEPGMEEEPAPLHFSPWQKSRDCLEPKLSSENSATAPSPGGGEGENTPWTSATEAEDRKGGREGSVATALGPXXXXXXXXPP------------------SVQRLLEGNMALPH-----TSSSPHGLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAAAGSGAESCGPGTQPLSPSSPRRSDATSMGIAASDXXXXXXSPL 1314
            + +GIG G+V++CL+GFNTCLFAYGQTGSGKTFTMMG                  P+ P    AI + A + +  +V          P     +      E+ A         ++     K  S++ +   + GG     T  ++AT +E   G R     T      XXXXXX                    +     EG+  +       T  +  G+IPR+C +LFER  A+         + ++  + G   GGP                   E + +            VREHP +GPFV GV   +V++A E + LLVEGQ RR VAGTNMNETSSRSHAIF +     + D +TGAEG T SKV NLVDLAGSEN+N AGS G RLKEGAAINKSLLTLGRVIKAL  A+  G     P       SSPR+S+    G A  D       PL
Sbjct:   84 VFEGIGQGVVESCLAGFNTCLFAYGQTGSGKTFTMMGAG----------------PSEPPAAKAIEATAIEQTEQQVRA------VTPXXXXXEMMALKSEQQASDAAVAESDTQGATVSKPPSDSDSNISNDGG-----TSTSNATTSEGTSGIRPRPTVTGAQVSNXXXXXXXXXXXXXXXXXXXXXXXSSITTNSTSEGSSGVSTDGPGGTGDANRGVIPRICDFLFERAEAV---------TAEANATAGVVTGGP-------------------EAIGE------------VREHPTKGPFVEGVVTATVTTARETERLLVEGQARRAVAGTNMNETSSRSHAIFTIVATKVERDLQTGAEGFTTSKV-NLVDLAGSENANTAGSAGTRLKEGAAINKSLLTLGRVIKALVDASTEGRPRVIPS------SSPRKSEQRLAGNAGVDESLPDPPPL 470          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: A0A238F9T3_9BASI (BQ2448_3362 protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238F9T3_9BASI)

HSP 1 Score: 165 bits (417), Expect = 1.910e-40
Identity = 101/206 (49.03%), Postives = 130/206 (63.11%), Query Frame = 1
Query:  580 SPHGLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAAAGSG 1197
            S  G+IP +C  LFER+ ++        D +                    ++V VS+TEIY EKVRDLLN +   + LKVREHP  GP+V G+  ++V S  +++AL+ EG   R VA TNMNETSSRSHA+F + +   + D ETG  G  VS++ +LVDLAGSE +N  G+TG RLKEGA INKSL TLGRVI ALAAA+G G
Sbjct:  152 SDRGIIPLICEALFERITSLST------DKLS-------------------FTVEVSYTEIYQEKVRDLLNPSNKGN-LKVREHPSLGPYVEGLSKLAVQSFPDIEALMDEGTKARTVAATNMNETSSRSHAVFTLLLTQRRLDVETGMAGEKVSRI-SLVDLAGSERANSTGATGTRLKEGALINKSLTTLGRVIAALAAASGGG 330          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: A0A2X0MMU4_9BASI (BQ5605_C026g10200 protein n=3 Tax=Microbotryum TaxID=34416 RepID=A0A2X0MMU4_9BASI)

HSP 1 Score: 164 bits (416), Expect = 2.590e-40
Identity = 101/206 (49.03%), Postives = 130/206 (63.11%), Query Frame = 1
Query:  580 SPHGLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAAAGSG 1197
            S  G+IP +C  LFER+ ++        D +                    ++V VS+TEIY EKVRDLLN +   + LKVREHP  GP+V G+  ++V S  +++AL+ EG   R VA TNMNETSSRSHA+F + +   + D ETG  G  VS++ +LVDLAGSE +N  G+TG RLKEGA INKSL TLGRVI ALAAA+G G
Sbjct:  217 SDRGIIPLICEALFERITSLST------DKLS-------------------FTVEVSYTEIYQEKVRDLLNPSNKGN-LKVREHPSLGPYVEGLSKLAVQSFPDIEALMDEGTKARTVAATNMNETSSRSHAVFTLLLTQRRVDVETGMAGEKVSRI-SLVDLAGSERANSTGATGTRLKEGALINKSLTTLGRVIAALAAASGVG 395          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: A0A125PHK6_9BASI (Kinesin-domain-containing protein (Fragment) n=2 Tax=unclassified Rhodotorula TaxID=2640191 RepID=A0A125PHK6_9BASI)

HSP 1 Score: 161 bits (408), Expect = 2.850e-39
Identity = 100/203 (49.26%), Postives = 125/203 (61.58%), Query Frame = 1
Query:  580 SPHGLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLN-DNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAA 1185
            S  G+IP +C  LFER+              ++A SGGD            ++V VS+TEIY EKVRDLLN  N    SLKVREHP  GP+V  +   +V +  +++ L+ EG   R VA TNMNETSSRSHA+F + +   + DP T   G  VS++ +LVDLAGSE +N  G+TG RLKEGA INKSL TLGRVI ALA A
Sbjct:  123 SDRGIIPLICEALFERI------------ENRTAESGGD----------VSFTVEVSYTEIYQEKVRDLLNPSNNNKGSLKVREHPTLGPYVENLSKCAVQNFEDVERLMDEGTKARTVAATNMNETSSRSHAVFTLLLTQKRLDPTTSMVGEKVSRI-SLVDLAGSERANSTGATGTRLKEGALINKSLTTLGRVIAALAQA 302          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: A0A1Y2G3H9_9BASI (Uncharacterized protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2G3H9_9BASI)

HSP 1 Score: 159 bits (402), Expect = 1.730e-38
Identity = 98/203 (48.28%), Postives = 127/203 (62.56%), Query Frame = 1
Query:  589 GLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAAAGSG 1197
            G+IP +C  LFER+ A+        D +                    ++V VS+TEIY EKVRDLLN N   + LKVREHP  GP+V  +  ++V S ++++AL+ EG   R VA T MNETSSRSHA+F + +   + D +TG  G  VS++ +LVDLAGSE +N  G+TG RLKEGA INKSL TLGRVI ALAAA+  G
Sbjct:  124 GIIPLICEALFERITALST------DKLS-------------------FTVEVSYTEIYQEKVRDLLNPNNKGN-LKVREHPSLGPYVESLSKLAVQSFADVEALMDEGTKARTVAATQMNETSSRSHAVFTLLLTQRRQDTDTGMAGEKVSRI-SLVDLAGSERANATGATGTRLKEGALINKSLTTLGRVIAALAAASQGG 299          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: UPI002007AF49 (uncharacterized protein n=1 Tax=Puccinia striiformis f. sp. tritici TaxID=168172 RepID=UPI002007AF49)

HSP 1 Score: 151 bits (382), Expect = 6.820e-37
Identity = 97/210 (46.19%), Postives = 125/210 (59.52%), Query Frame = 1
Query:  589 GLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAAAGSGAESCGPG 1218
            G+IP  C  LF+R+           D   + P+               ++V VSF EIY E+VRDLLN     + L+VREHP  GP+V  +  ++V S S ++ L+ EG   R VA TNMNETSSRSH++F + +   + D  TG EG  VS++ +LVDLAGSE +N  G+TGVRLKEGA INKSL TLG+VI ALA A      S GPG
Sbjct:  105 GIIPLTCSALFDRIE----------DKKVTDPA-------------VSYTVEVSFMEIYNERVRDLLNPKNKGN-LRVREHPSLGPYVEDLSKLAVQSYSNVETLMDEGNKARTVAATNMNETSSRSHSVFTLLLTQRRKDSTTGMEGEKVSRI-SLVDLAGSERANSTGATGVRLKEGAQINKSLTTLGKVISALATAG----SSSGPG 285          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: A0A1D1V5S0_RAMVA (Kinesin motor domain-containing protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1V5S0_RAMVA)

HSP 1 Score: 144 bits (362), Expect = 7.360e-37
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = 1
Query:  589 GLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALA 1179
            G+IP+LCH +F R+           D+  S                T ++V VS+ EIY E+VRDLLN    + SL+VREHP+ GP+V  +  + V+S  ++  L+ EG   R VA TNMNETSSRSHA+F + +   + D  T  +G  VSK+ +LVDLAGSE +   G+ G RLKEGA INKSL TLG+VI ALA
Sbjct:   37 GIIPQLCHDMFRRIN----------DTDASD---------------TVYTVEVSYMEIYCERVRDLLNPQN-EKSLRVREHPILGPYVEDLSKLVVTSYRDILQLMEEGNKARTVAATNMNETSSRSHAVFTIVLTQRKHDEHTDLKGEKVSKI-SLVDLAGSERAESTGAQGQRLKEGANINKSLTTLGKVISALA 206          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: Q8I6M1_EPTBU (Kinesin-like protein (Fragment) n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=Q8I6M1_EPTBU)

HSP 1 Score: 144 bits (364), Expect = 9.510e-37
Identity = 92/203 (45.32%), Postives = 119/203 (58.62%), Query Frame = 1
Query:  589 GLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAAAGSG 1197
            G+IP+LC  LF R+            S  S P                +SV VS+ EIY E+VRDLLN     H L+VREHP+ GP+V  +  ++V+S  ++  L+  G   R VA TNMNETSSRSHA+F + +   + DP T      VSKV +LVDLAGSE ++  G+ G+RLKEGA INKSL TLG+VI +LA   G G
Sbjct:   14 GIIPQLCEELFYRI------------SNNSDPD-------------LSFSVEVSYKEIYCERVRDLLNPKNKGH-LRVREHPLLGPYVEDLSKLAVTSYKDIAELMDSGNKARTVAATNMNETSSRSHAVFTIVLTQRRRDPNTDITTEKVSKV-SLVDLAGSERADSTGAKGMRLKEGANINKSLTTLGKVISSLAEMDGPG 189          
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Match: A0A183TQI8_SCHSO (Kinesin motor domain-containing protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183TQI8_SCHSO)

HSP 1 Score: 143 bits (361), Expect = 1.250e-36
Identity = 91/197 (46.19%), Postives = 118/197 (59.90%), Query Frame = 1
Query:  589 GLIPRLCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSFTEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDALLVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVMNLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALA 1179
            GL PRLC  LF+R+           ++VK   S              Q+ V VS+ EIY E+VRDLLN N+  + L+VREHP+ GP+V  +   +V S  E++ L+  G   R VA TNMNETSSRSHA+  + V   +TD  T   G  VSK+ +LVDLAGSE ++  G+ G RLKEGA IN+SL TLG+VI  LA
Sbjct:   42 GLSPRLCRELFQRL-----------EAVKRTKSND-----------FQYLVEVSYMEIYCERVRDLLNSNQKGN-LRVREHPLLGPYVEDLSKCAVRSFEEVNDLMDAGNKSRTVAATNMNETSSRSHAVLTLLVTQRETDGTTDTVGEKVSKI-SLVDLAGSERADSTGAKGTRLKEGATINRSLTTLGKVIACLA 214          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9338.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQV1_ECTSI1.950e-6139.64Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KU80_9PHAE4.580e-5037.31Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A238F9T3_9BASI1.910e-4049.03BQ2448_3362 protein n=1 Tax=Microbotryum intermedi... [more]
A0A2X0MMU4_9BASI2.590e-4049.03BQ5605_C026g10200 protein n=3 Tax=Microbotryum Tax... [more]
A0A125PHK6_9BASI2.850e-3949.26Kinesin-domain-containing protein (Fragment) n=2 T... [more]
A0A1Y2G3H9_9BASI1.730e-3848.28Uncharacterized protein n=1 Tax=Leucosporidium cre... [more]
UPI002007AF496.820e-3746.19uncharacterized protein n=1 Tax=Puccinia striiform... [more]
A0A1D1V5S0_RAMVA7.360e-3745.69Kinesin motor domain-containing protein n=1 Tax=Ra... [more]
Q8I6M1_EPTBU9.510e-3745.32Kinesin-like protein (Fragment) n=1 Tax=Eptatretus... [more]
A0A183TQI8_SCHSO1.250e-3646.19Kinesin motor domain-containing protein n=1 Tax=Sc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9338contigD-mesarthrocarpus_Contig9338:42..4629 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQV1
PFAMsKinesin
Model size1323
Max annot lvl2759|Eukaryota
KEGG koko:K17915
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0016020
Exons6
Evalue5.97e-62
EggNOG OGsCOG5059@1|root,KOG0241@2759|Eukaryota
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-16_000870.1
Descriptionmicrotubule motor activity
Cds size1320
COG categoryZ
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9338.1.2prot_D-mesarthrocarpus_Contig9338.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9338 45..4629 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791087.8442624-UTR-D-mesarthrocarpus_Contig9338:41..441680791087.8442624-UTR-D-mesarthrocarpus_Contig9338:41..44Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9338 42..44 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791087.865985-CDS-D-mesarthrocarpus_Contig9338:44..7841680791087.865985-CDS-D-mesarthrocarpus_Contig9338:44..784Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9338 45..784 +
1680791087.880999-CDS-D-mesarthrocarpus_Contig9338:1794..18701680791087.880999-CDS-D-mesarthrocarpus_Contig9338:1794..1870Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9338 1795..1870 +
1680791087.8922312-CDS-D-mesarthrocarpus_Contig9338:2532..26361680791087.8922312-CDS-D-mesarthrocarpus_Contig9338:2532..2636Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9338 2533..2636 +
1680791087.903074-CDS-D-mesarthrocarpus_Contig9338:3015..31421680791087.903074-CDS-D-mesarthrocarpus_Contig9338:3015..3142Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9338 3016..3142 +
1680791087.9185338-CDS-D-mesarthrocarpus_Contig9338:3860..40281680791087.9185338-CDS-D-mesarthrocarpus_Contig9338:3860..4028Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9338 3861..4028 +
1680791087.9294777-CDS-D-mesarthrocarpus_Contig9338:4524..46291680791087.9294777-CDS-D-mesarthrocarpus_Contig9338:4524..4629Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9338 4525..4629 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9338.1.2

>prot_D-mesarthrocarpus_Contig9338.1.2 ID=prot_D-mesarthrocarpus_Contig9338.1.2|Name=mRNA_D-mesarthrocarpus_Contig9338.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=440bp
MKGIGMGIVDTCLSGFNTCLFAYGQTGSGKTFTMMGYDSMPKPHLPSNSL
GVPLPATPSTGSAIMSHAAQDSVCEVDRGGAGSESNPCSADHKTEPGMEE
EPAPLHFSPWQKSRDCLEPKLSSENSATAPSPGGGEGENTPWTSATEAED
RKGGREGSVATALGPGPMPVPYPPPSVQRLLEGNMALPHTSSSPHGLIPR
LCHYLFERVLAMGGRMEGGGDSVKSAPSGGDGVGGPGGGLVTQWSVRVSF
TEIYLEKVRDLLNDNRPDHSLKVREHPMQGPFVAGVRWVSVSSASEMDAL
LVEGQGRRVVAGTNMNETSSRSHAIFAVEVVCTQTDPETGAEGSTVSKVM
NLVDLAGSENSNMAGSTGVRLKEGAAINKSLLTLGRVIKALAAAAGSGAE
SCGPGTQPLSPSSPRRSDATSMGIAASDDPPPPPSPLSR*
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mRNA from alignment at D-mesarthrocarpus_Contig9338:42..4629+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9338.1.2 ID=mRNA_D-mesarthrocarpus_Contig9338.1.2|Name=mRNA_D-mesarthrocarpus_Contig9338.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4588bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9338:42..4629+ (Discosporangium mesarthrocarpum MT17_79)
CTGATGAAAGGCATCGGCATGGGCATCGTAGACACCTGCCTCTCGGGCTT CAATACATGCCTCTTTGCCTATGGCCAGACTGGCAGTGGGAAGACCTTCA CAATGATGGGCTATGACAGCATGCCTAAGCCCCACTTGCCCTCCAACTCT CTTGGGGTCCCTCTCCCAGCAACGCCTTCGACAGGCTCGGCCATCATGTC CCACGCAGCTCAGGACTCAGTCTGTGAAGTTGATCGTGGTGGTGCTGGTA GTGAAAGCAACCCTTGTTCTGCCGATCACAAAACAGAACCAGGGATGGAG GAGGAACCAGCCCCGCTCCATTTTTCCCCTTGGCAAAAATCAAGGGACTG TCTGGAGCCTAAACTGTCCTCAGAAAACTCTGCGACTGCTCCTTCACCAG GGGGTGGTGAGGGGGAAAACACACCATGGACAAGCGCAACGGAGGCTGAG GACAGGAAAGGGGGAAGGGAGGGCTCCGTGGCCACAGCTCTTGGACCTGG ACCTATGCCCGTACCATACCCACCCCCCTCGGTGCAGAGGCTGCTGGAAG GGAACATGGCCCTGCCACACACGAGCTCATCGCCTCATGGGCTCATCCCA CGCCTCTGTCACTATCTATTTGAGAGGGTCTTGGCCATGGGGGGAAGAAT GGAGGGGGGGGGGGACAGTGTGAAGTCAGCGCCTTCCGGAGGAGATGGGG TGGGGGGGCCTGGAGGAGGGCTTGTCACTCAATGGTCTGTCAGGTGCGCC GGGTTCAGAAATATTGATCACAGGGGGAGGGGATGACTGTGGGGAGGAAG AGGGAGAATAGGGAGGACTAAGCATTGAAGGGATTTTTTTCAATGTAGTC CCATGTTGGTTGGGTTGGTGGTCTAGCGTAGTCTGTGGTTTCTTTTCAGG GTCAACTGGGCTCAAGTATCCCGGAGGAATCCCACAGGAGAGACTCACCG TTTGTTCTGCGGCGGAAACTAGGCCGGCACCTGTATCGTTGACAACCCCC CTCAGAAGTTGTAGGACTTGTTGAAGGAGTTGATTCAATCATTCGTATGT GGCACTGGCACGAGCAGCGCTTCGACTCCCCCAGAGAAACCCTTAGAGCC CTGAATTTGCAGATGTGACCTGTTTACTTCACGCTCAGATGAAATGTTCT CCGACCTGAATGACATCAGTGTGTCCTCCTTGGGTGAGCCGTGGCCTATT GCAGAAGCCTCAAATGCTTTCCAAGCAACAGGAAGGATCCTCCAGTGCTG AACAACCCCCTGCCTGTTATATGATCGCATTCATAACAACAGTTGGTTCA CAAGCAAAGCTCAACCTCAAGTGAGAGCTTGCCAAACTCAGCTACTGTGC ACAGAAGCACAGCTTTCTTGGCCAAGGTCTTTTATTCCCTGCCCTGTCTT CAAGGCTTCATCCCCTTTGTGTATGGTGTGAAGAGGAGAGGTGTCATCTA TGAAGAAATTAGAGGCATTTGATTCCCATCAACACCCAACACAAGACCCT GCCCTAACTTACCCTTGGGAACCAATGCTACAGAGTGTATCTCTTCCCAA GAATTTCAGGAGCCCCTGCCACCCTTCTGCGTTAAACCTCTGCCTCATTT TTTCGCCCATCTTCTTTCACTTATGCTGCCCTGAGGCCCTAACCCTAACC CCAGAAGCCCTACTTGATTATAAACCACCTGCATGATCCGAGTCCTGCAC CTTTGAAAATCACCTGTACCCCGTTTATTTCCATGCTATCTTATTGGTTG CAGGGTTTCTTTCACGGAGATTTACCTGGAGAAGGTCAGGGATCTACTCA ATGACAACAGGCCGGACCACAGCCTGAAAGTGAGAGGAAGGAAGAGAGCA CAAAGGAGGCCGATGCTTTGCGTTGGTTCCGTCACCTCCAAGCTCCGCAA CTGTATGCTGTGTTTCAATGTGTGCTGTCAACCCATGTCAGGCCACGCTG TACACACGTAACCCCAACCCTAACCCTTACCCTAACCCTTTCCCTAACCC TTTCCCTAACCCTTTCCCTAGCCCTTACCCTAACCCTAACCCTTACCCTA ACCCTAACCCTAACCCTAACCCTAACCCTAATCCTAATTCTAACCCTAAT TCTAATTCTAACCCTATCCTCTAGGTTGCCTTTTTGTCGTGTGCTTTGAA GTGTTGTGCTTTCATCTGCTACACCACTAGAGGAGAAATACGACAGATCT GAGAAATCAAAGCAATCCACCAGACTATTTGGGGGGGAAAGGTGCCTAAG ACAAAACCTGCAGCAAGTTCAATGGGATTTCTGGCCGGTTATTGCGGGAT TTTCATCAAAACAACATATGAAGCATTGAACTTAGAGTTGTTGAAGTTCG AAGCATTGCACTTCAAAGTGTGGTCTCCAGGTACTGTGTAATCTGTTGCT TTGATTGCTTTGTGCACCCCCCTATCCTGCCACTACTCAAGCAGCGCCAT GACACACACACACACACTTCTTCCTCCCTTTGGCTACTCAGGTTCGAGAA CACCCTATGCAAGGCCCGTTTGTGGCTGGGGTGCGGTGGGTCAGCGTTAG CAGTGCCAGTGAGATGGACGCTTTGCTTGTGGAGGGTCAGGGCAGGTGAT GGTTACAATAGGGTCTCCAGCTGGGAGAGATCAGGGATTGGTTTTAAGAG ACACGTTTTGGGTCTTGGCCACGATCATGCCTAGGGATATTGTATATCTA GAGCTCTAAGGGTGAGGGGAGGGATTGAATGCAAACTTGTCAGAGTTGAA GTCTCTCTGGGCTGAGGCTGAGGTAAGGTTGAGGACCTTCAGGTTAAGTG TGTGCACAGGGGTCTCTTGCAGTGAAGTCAGAAAACACACGCCGCATGAA GAAACGAATCTTTACTGTAGTATCTCATATCTTTATTGCAGCATCTTATT CAGCCTCCCCCCCCCCCCCCATGCTGAACCCCACGTCCACACAATGGTGC TCAACCCACTGAAAAAATAATCAGGCGTGTTGTGGCAGGGACAAACATGA ACGAGACGTCCAGTCGCAGCCATGCGATCTTTGCTGTCGAAGTGGTGTGC ACTCAGACGGATCCTGAAACGGGGGCAGAGGGCAGCACTGTCAGCAAGGT CGTGATAATCCTCCTTCCCCGCTCACCAATCCAAGCTAGCGTCTGAACCT CCCTCGCCCCATGTCTTTCAGAACCATAACAGATATTTTTTGTTGGCAGT TAACTATGTCACAAGCCGCACACACACACACACACACACACACACACGGG CATACACACACACACATGGGCATACATATTCCCAAGCATTCCCGAGCAAC AAAGCATCCGAGCTGAGGTGGCCAGCAACAAAGAGAAGTATCATCCTGCC ACCATGCGCTTGCCCTAGCTGACCCTAACCCTAGCCCTAACCCCAACCCT AAACCTAGGGGTGCCACTAACAAGGGGCTAAAGCCATCATTACCTCTGCA GATCCATGAAGCACTAGGTCGTGCTCAGTCCTTGGAAGTATGAAATGGTG CCCTGAGGTTAGCAGGGCAGTGTAGCTCACTTCATTCACTCCATTGGCCG CACCTCCACGGCCCGCTAGTGTCCTTTTTCCGTTCAGGCCAGTCCGTTGA GGCAGCAATTGGATAGTACAGCACAGCAGTGCTGTGCGGTACAGCAAGTA GAGCTCTACTCCACACCAAGGGTTTCCTGAAGTACTGAGTGCGTGCATGA AATGGACCCTCACATGCTTCGGCCTGAGAGGAGGGGCGTTGTAGAGGGGT ATGTCGTGCAGGGTGACCAGCTCATGGTTCTTCCTGTCCACACCCCGTGT CTATACACACTCACCACAGATGAACCTGGTGGACTTGGCGGGCTCTGAGA ACTCCAACATGGCAGGGTCCACGGGGGTGAGGCTCAAGGAAGGGGCAGCC ATCAATAAGTCCCTGCTGACGCTGGGACGGGTCATCAAGGCCCTTGCAGC CGCCGCTGGCTCTGGGGCGGAGTCATGCGGCCCTGGGGTTTGTTCCAGCG AGGTACAATGCATGACTTGCAAGCGTGCGTACAAGAATTGCGTCATTCCC AACCCCTCCTCCCCTCCTCCCCCCCCAGCCCCTGGTTTTCTTGTCGTAGG CTGTGGCAATAACCTTTGAGGTGATCAGAGCGTACTTTGAAGTGTACATG CTTCGAAGCAGGGAAAAAACAGGTGGATCTAGAGCTCTATACATTGAATT TGCTGCTCTGAGGGCAGATGCACTAGCTGAATGAGGTACTTCATAGGTGA TTTGAATTTGGTAAAAGGTCCACAGGCGTTGTCGCTGATCGATCAACACA CCATGTGACCAAAAGTATGAACTCAAACGCTCGGATCTCTCAGTCTGCAA GGGCGGTAGGCAGCACTCTCCTGACCCGACAGATGAAGCCCTAGGAGGCA TCAAACACGCCACCCCGGTCGAAAATCAACCCTCCGCCTTCCCCCCTTCA CTCCCCTGTCTCTGGGATGCTTGCCTACACAAGACGCAACCCCTAAGCCC AAGCAGTCCCAGACGAAGCGATGCCACCTCCATGGGCATTGCTGCGTCAG ATGATCCCCCCCCCCCTCCATCACCTCTGTCAAGGTAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9338:42..4629+

>mRNA_D-mesarthrocarpus_Contig9338.1.2 ID=mRNA_D-mesarthrocarpus_Contig9338.1.2|Name=mRNA_D-mesarthrocarpus_Contig9338.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1320bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9338:42..4629+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAAGGCATCGGCATGGGCATCGTAGACACCTGCCTCTCGGGCTTCAA
TACATGCCTCTTTGCCTATGGCCAGACTGGCAGTGGGAAGACCTTCACAA
TGATGGGCTATGACAGCATGCCTAAGCCCCACTTGCCCTCCAACTCTCTT
GGGGTCCCTCTCCCAGCAACGCCTTCGACAGGCTCGGCCATCATGTCCCA
CGCAGCTCAGGACTCAGTCTGTGAAGTTGATCGTGGTGGTGCTGGTAGTG
AAAGCAACCCTTGTTCTGCCGATCACAAAACAGAACCAGGGATGGAGGAG
GAACCAGCCCCGCTCCATTTTTCCCCTTGGCAAAAATCAAGGGACTGTCT
GGAGCCTAAACTGTCCTCAGAAAACTCTGCGACTGCTCCTTCACCAGGGG
GTGGTGAGGGGGAAAACACACCATGGACAAGCGCAACGGAGGCTGAGGAC
AGGAAAGGGGGAAGGGAGGGCTCCGTGGCCACAGCTCTTGGACCTGGACC
TATGCCCGTACCATACCCACCCCCCTCGGTGCAGAGGCTGCTGGAAGGGA
ACATGGCCCTGCCACACACGAGCTCATCGCCTCATGGGCTCATCCCACGC
CTCTGTCACTATCTATTTGAGAGGGTCTTGGCCATGGGGGGAAGAATGGA
GGGGGGGGGGGACAGTGTGAAGTCAGCGCCTTCCGGAGGAGATGGGGTGG
GGGGGCCTGGAGGAGGGCTTGTCACTCAATGGTCTGTCAGGGTTTCTTTC
ACGGAGATTTACCTGGAGAAGGTCAGGGATCTACTCAATGACAACAGGCC
GGACCACAGCCTGAAAGTTCGAGAACACCCTATGCAAGGCCCGTTTGTGG
CTGGGGTGCGGTGGGTCAGCGTTAGCAGTGCCAGTGAGATGGACGCTTTG
CTTGTGGAGGGTCAGGGCAGGCGTGTTGTGGCAGGGACAAACATGAACGA
GACGTCCAGTCGCAGCCATGCGATCTTTGCTGTCGAAGTGGTGTGCACTC
AGACGGATCCTGAAACGGGGGCAGAGGGCAGCACTGTCAGCAAGGTCATG
AACCTGGTGGACTTGGCGGGCTCTGAGAACTCCAACATGGCAGGGTCCAC
GGGGGTGAGGCTCAAGGAAGGGGCAGCCATCAATAAGTCCCTGCTGACGC
TGGGACGGGTCATCAAGGCCCTTGCAGCCGCCGCTGGCTCTGGGGCGGAG
TCATGCGGCCCTGGGACGCAACCCCTAAGCCCAAGCAGTCCCAGACGAAG
CGATGCCACCTCCATGGGCATTGCTGCGTCAGATGATCCCCCCCCCCCTC
CATCACCTCTGTCAAGGTAA
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