mRNA_D-mesarthrocarpus_Contig9332.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9332.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig9332.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9332.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9332contigD-mesarthrocarpus_Contig9332:2292..2826 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog157072.XP_008867725.1
PFAMsCalpain_III,EF-hand_5,EF-hand_7,EF-hand_8,Peptidase_C2,WW
Model size171
Max annot lvl2759|Eukaryota
KEGG koko:K08574,ko:K08579
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Evalue2.71e-13
EggNOG OGsKOG0045@1|root,KOG0045@2759|Eukaryota
Descriptioncalcium-dependent cysteine-type endopeptidase activity
Cds size171
COG categoryO
BRITEko00000,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791087.6016397-CDS-D-mesarthrocarpus_Contig9332:2291..23801680791087.6016397-CDS-D-mesarthrocarpus_Contig9332:2291..2380Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9332 2292..2380 +
1680791087.6134324-CDS-D-mesarthrocarpus_Contig9332:2744..28261680791087.6134324-CDS-D-mesarthrocarpus_Contig9332:2744..2826Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9332 2745..2826 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9332.3.1prot_D-mesarthrocarpus_Contig9332.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9332 2292..2826 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9332.3.1

>prot_D-mesarthrocarpus_Contig9332.3.1 ID=prot_D-mesarthrocarpus_Contig9332.3.1|Name=mRNA_D-mesarthrocarpus_Contig9332.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=57bp
SWDDWLRHFTHLFSGIDFPHSWCGTRVTGRWDDDSGGNRLLATFLSNPKM
KLYLPQK
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mRNA from alignment at D-mesarthrocarpus_Contig9332:2292..2826+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9332.3.1 ID=mRNA_D-mesarthrocarpus_Contig9332.3.1|Name=mRNA_D-mesarthrocarpus_Contig9332.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=535bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9332:2292..2826+ (Discosporangium mesarthrocarpum MT17_79)
TCCTGGGATGATTGGCTCAGACACTTCACACACCTCTTTTCAGGCATTGA
TTTTCCACACAGTTGGTGTGGAACAAGAGTTACAGGAAGGTCAGAGCATA
CTACCTTACAGAAAGGTTGGGGAGACCAAGCAATATGTGTGTGCAGGTGC
TGATCTATGAAGTTTTTGTACAAAGTAGTTGAAGTTGAGGTTGAGAGAGA
TGTTCAGGTATTGAGAGATCCTTGCATGCTCAGTCTTACTGTCATCATGT
CCTTCCATCATGTCTTACCATCAGATCTTGTCATCATGCCACCTCATCAT
GGCGTGACAGTATCTCATGTCATCATCTCCCTGCTTGCTTGCTTCGCATG
TGGCCTTAGATTTGGTTATCTTGCTCAAGTGTGATATCCAGTATGAAGTT
CAAGAAGAGAATTTCTGACCCTGGGCTGGTTGATCTTCTTGTTGGCAAAG
TAGGTGGGACGATGACTCTGGAGGAAACCGCCTTTTGGCCACCTTCCTGT
CAAATCCCAAGATGAAGCTCTACCTTCCACAAAAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9332:2292..2826+

>mRNA_D-mesarthrocarpus_Contig9332.3.1 ID=mRNA_D-mesarthrocarpus_Contig9332.3.1|Name=mRNA_D-mesarthrocarpus_Contig9332.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=171bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9332:2292..2826+ (Discosporangium mesarthrocarpum MT17_79)
TCCTGGGATGATTGGCTCAGACACTTCACACACCTCTTTTCAGGCATTGA
TTTTCCACACAGTTGGTGTGGAACAAGAGTTACAGGAAGGTGGGACGATG
ACTCTGGAGGAAACCGCCTTTTGGCCACCTTCCTGTCAAATCCCAAGATG
AAGCTCTACCTTCCACAAAAG
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