prot_D-mesarthrocarpus_Contig918.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig918.1.1
Unique Nameprot_D-mesarthrocarpus_Contig918.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length372
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig918.1.1 vs. uniprot
Match: D7FWM3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM3_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 5.680e-58
Identity = 167/341 (48.97%), Postives = 210/341 (61.58%), Query Frame = 0 
Query:    1 TKDQEAWLGRINYYGGRKMWRKAEEKFDQMMDEGVEPTLQVCNSLLEAYRKAGRYQNAVHFLEDLCLGRGSASPASSHSSL-GANVVGEPTPPEGAGXXXXXXXXXXSEV-------LLVRPDVTSFNTVLAALANAGKWKVALEISEPMRAYPGVGK---VGEXXXXXXXXXXXXXXXXKGQRRAAVAMVAALLEANADSYVHLITACGKGGQPDRARNLFREIQEQGIVPSPGVYAAMMKTLAREGTKEAAMEAMALL-EMGIEQIGGEGXXXXXXXXXXXXXXXXXXXXXDPTASDSVPALEVYAGAIEACAGAGDWQEAVTILDKMRAVNIKPDPRC 329
            +++Q AWLGR++YYGGR+MWRKAE+KF QM DEGV PTL +CNSL+EAY K  RY NAV FLEDLCLG   +  A  H  L GA V      P  +G XXXXXXXXX E          + P++ +FN VLA LA+AGKWK AL++S PMRA    GK    G XXXXXXXXXXXXXXXX    R AV  VA  L A++++Y HLI ACGKGG+PDR+R LF E++ +GI P     AA++K LA+ G    + EA+ LL +M     GG                          +  +  +L  + GAIEACA  G+WQ+AV++LD+MR   + PD RC
Sbjct:   86 SEEQVAWLGRLDYYGGRQMWRKAEDKFQQMQDEGVYPTLPLCNSLMEAYLKGKRYVNAVGFLEDLCLGNILSDVA--HDGLRGAKVS-----PAASGSXXXXXXXXXXEAGETAVATAPIVPNLRTFNLVLATLASAGKWKKALDVSAPMRA----GKDPAAGSXXXXXXXXXXXXXXXXGDLARNAVKSVAGGLTADSETYTHLIVACGKGGEPDRSRQLFDEMRSRGISPPAEATAALIKALAKGG--RGSSEALRLLGDMRAAAQGGAAGRSGGVYLGDGMPSDGMDGAAREKSEAAAQSLG-FEGAIEACAVNGEWQKAVSLLDEMRQARMYPDARC 412
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig918.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWM3_ECTSI5.680e-5848.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 42..64
e-value: 0.75
score: 10.2
coord: 190..219
e-value: 1.3E-4
score: 22.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 11..38
e-value: 8.5E-5
score: 20.5
coord: 190..222
e-value: 9.3E-7
score: 26.6
coord: 294..326
e-value: 3.7E-5
score: 21.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 314..372
e-value: 5.5E-4
score: 20.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 9.240434
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 187..221
score: 11.542307
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 3..37
score: 9.054091
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 108..265
e-value: 9.1E-18
score: 66.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 284..372
e-value: 4.0E-15
score: 57.6
coord: 2..75
e-value: 1.1E-9
score: 39.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..109
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 11..250
coord: 113..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig918contigD-mesarthrocarpus_Contig918:179..4625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig918.1.1mRNA_D-mesarthrocarpus_Contig918.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig918 179..4625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig918.1.1 ID=prot_D-mesarthrocarpus_Contig918.1.1|Name=mRNA_D-mesarthrocarpus_Contig918.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=372bp
TKDQEAWLGRINYYGGRKMWRKAEEKFDQMMDEGVEPTLQVCNSLLEAYR
KAGRYQNAVHFLEDLCLGRGSASPASSHSSLGANVVGEPTPPEGAGGGGS
ESGGGGSEVLLVRPDVTSFNTVLAALANAGKWKVALEISEPMRAYPGVGK
VGEGGGRGAGGAGGTGGEGKGQRRAAVAMVAALLEANADSYVHLITACGK
GGQPDRARNLFREIQEQGIVPSPGVYAAMMKTLAREGTKEAAMEAMALLE
MGIEQIGGEGRGRGRGDGRGRGKGGGGSGEGDPTASDSVPALEVYAGAIE
ACAGAGDWQEAVTILDKMRAVNIKPDPRCYGTAMRACVAQGNWQLTLALL
NTMRKEEVPRMAFNYNIAMQVC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf