mRNA_D-mesarthrocarpus_Contig9080.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9080.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9080.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A6H5K116_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K116_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.850e-48
Identity = 90/116 (77.59%), Postives = 103/116 (88.79%), Query Frame = 1
Query:    1 EMERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDT 348
            EMER LMS+MH  DK +FRA  L + L  +WVLS+FGTEIR+YFA+QTAEVARETLK E+LQVQTQELATAL+QALLNDQEV+ AGALFLREAS+N ETQAALVSLA++VLQHPDT
Sbjct:  229 EMERNLMSRMHAQDKNRFRAVGLSSLLILIWVLSMFGTEIRRYFASQTAEVARETLKVEALQVQTQELATALVQALLNDQEVVRAGALFLREASANSETQAALVSLALYVLQHPDT 344          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A835YV69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV69_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.000e-44
Identity = 75/134 (55.97%), Postives = 106/134 (79.10%), Query Frame = 1
Query:    1 EMERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILAD 402
            +ME  LM++M TH+K +FR  A++T L  +WV + FG EIR +   QTAEVARETLKHE++Q+QTQELA A++  LLND +V+ A ++FL++A+S+P+TQAA+VSLA HVLQHPDTL EV+ LA+KL+  ++ +
Sbjct:    4 DMEAKLMARMRTHNKGRFRTAAIVTVLTVIWVFNTFGKEIRVWMGGQTAEVARETLKHEAIQIQTQELAMAVVNTLLNDPKVLAATSVFLQDAASDPDTQAAIVSLASHVLQHPDTLQEVHALAQKLIAQLVKE 137          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: D7FTZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ2_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.000e-32
Identity = 64/81 (79.01%), Postives = 74/81 (91.36%), Query Frame = 1
Query:  184 QVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQVS 426
            QVQTQELATAL+QALLNDQEV+ AGALFLREAS+NPETQAALVSLA++VLQHPDT  E  +LAKKL+KAIL DP+T+ QV+
Sbjct:   15 QVQTQELATALVQALLNDQEVVRAGALFLREASANPETQAALVSLALYVLQHPDTRAETKVLAKKLIKAILDDPDTVLQVT 95          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A7S3UXV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXV6_HETAK)

HSP 1 Score: 124 bits (312), Expect = 1.610e-31
Identity = 62/140 (44.29%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    7 ERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQVS 426
            E  LM ++H  ++ +FR   L T L   W+ + FG EI  +F  QTAEVA+ETL+ ESLQ+QTQELATA++Q LLND +V+    +FL+EA+ N ET+ ALV L + +LQH +T+ E   L +K+V  +  +P  +  ++
Sbjct:  113 EEYLMKRIHIGNQNRFRTAVLGTILTCCWLTATFGQEIYSFFTKQTAEVAKETLRQESLQIQTQELATAIVQTLLNDDQVMKNATIFLKEAAGNEETKKALVGLGLFILQHEETMREAVELGRKIVVQLSKEPSVINNIA 252          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A7R9YAX6_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAX6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 6.030e-31
Identity = 64/134 (47.76%), Postives = 87/134 (64.93%), Query Frame = 1
Query:    1 EMERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILAD 402
            E+E  LM      +  Q R      AL TVWV SVFG  IR++F+ QTAEVARETL++E LQ +TQELA A+++ +LND++++     F+R  + +   + ALV LA+H+LQH DTL EV +L  KLV  IL D
Sbjct:   54 EIEARLMRTTRASNVEQIRLALTAAALVTVWVFSVFGRHIRRFFSKQTAEVARETLENEELQARTQELAAAVVRTILNDEDILVKITAFIRNTADDDNLRDALVQLALHILQHDDTLAEVKVLGLKLVDYILKD 187          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A1V9YHQ0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YHQ0_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.170e-19
Identity = 47/108 (43.52%), Postives = 72/108 (66.67%), Query Frame = 1
Query:   97 LSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQ 420
            L  F  E++   +  TAEVA ETL++E+LQ+QTQELA+ ++Q +LND +V+     F++  S +  TQ ALV+L  +VL +P T+ +V  L+K+L+  +L DP TL Q
Sbjct:   30 LIAFAPELKNSMSKTTAEVASETLQNENLQIQTQELASQIVQTVLNDPKVLNQALQFIKNLSESEITQTALVNLTSNVLNNPQTMAQVTKLSKQLLLNLLQDPTTLRQ 137          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A6G0XYN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYN6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.930e-18
Identity = 54/131 (41.22%), Postives = 78/131 (59.54%), Query Frame = 1
Query:   28 MHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQ 420
            M+   K     G  I A+  V V++ FG E+R      TAEVA ETL++ESLQ+QTQELA+ ++Q +LND +V+   ++FL++  +   T  ALV L  +VL  P T   V  LAK+++  +  DP TL Q
Sbjct:   77 MNMQGKNWNAWGLGILAIGAVGVVA-FGPEMRSKMTKTTAEVATETLQNESLQIQTQELASQIVQTVLNDPKVLDQASVFLKKLFAMEMTHVALVHLTSNVLNDPQTSAHVTKLAKQILFNLFQDPHTLRQ 206          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A485KNS4_9STRA (Aste57867_9680 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNS4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.120e-17
Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = 1
Query:   88 VWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQ 420
            V+ +  FG E+R      TAEVA ETL++ESLQ+QTQELA+ ++Q +LND +V+     FL++  +   T  ALV L   VL  P TL  V  LAK+L+  +  DP TL Q
Sbjct:  103 VFXMIAFGPEMRSKMTKTTAEVATETLQNESLQIQTQELASQIVQTVLNDPKVLDQACHFLKKLFAMEMTHVALVQLTSGVLNDPQTLAHVTKLAKQLLFNLFQDPTTLRQ 213          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A482RWR5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWR5_9ARCH)

HSP 1 Score: 81.6 bits (200), Expect = 1.260e-17
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 1
Query:  157 RETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILAD 402
            +ETLK+E+L+VQTQELATA++Q +LND  +    + FL EA+  P TQ ALV L VHVLQH DTL    +LA KLV  +  D
Sbjct:    2 QETLKNEALKVQTQELATAVVQTILNDPAIALHASAFLAEATKAPLTQEALVQLTVHVLQHEDTLRAAQLLATKLVALLAQD 83          
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A024UV14_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV14_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 4.860e-14
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  106 FGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQ 420
            FG E+R      TAEVA ETL++ESLQ+QTQELA+ ++Q +LND +V+   + FL++  +   T+ A+V L         TL  V  L+K+++  +  DP TL Q
Sbjct:   96 FGPEMRSKMTKTTAEVATETLQNESLQIQTQELASQIVQTVLNDPKVLDQASQFLQKLMAMDATRGAMVQLXXXXXXXXXTLAHVTKLSKQILFNLFQDPATLRQ 200          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5K116_9PHAE1.850e-4877.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YV69_9STRA1.000e-4455.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FTZ2_ECTSI3.000e-3279.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UXV6_HETAK1.610e-3144.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9YAX6_9STRA6.030e-3147.76Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A1V9YHQ0_9STRA5.170e-1943.52Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A6G0XYN6_9STRA6.930e-1841.22Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KNS4_9STRA1.120e-1745.05Aste57867_9680 protein n=1 Tax=Aphanomyces stellat... [more]
A0A482RWR5_9ARCH1.260e-1754.88Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A024UV14_9STRA4.860e-1440.95Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9080contigD-mesarthrocarpus_Contig9080:2475..4663 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FTZ2
Model size426
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons4
Evalue4.73e-33
EggNOG OGs2CKXH@1|root,2SE2H@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_003350.1
Cds size423
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791063.12857-CDS-D-mesarthrocarpus_Contig9080:2474..26571680791063.12857-CDS-D-mesarthrocarpus_Contig9080:2474..2657Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9080 2475..2657 -
1680791063.1394475-CDS-D-mesarthrocarpus_Contig9080:2885..29421680791063.1394475-CDS-D-mesarthrocarpus_Contig9080:2885..2942Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9080 2886..2942 -
1680791063.15316-CDS-D-mesarthrocarpus_Contig9080:3654..37531680791063.15316-CDS-D-mesarthrocarpus_Contig9080:3654..3753Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9080 3655..3753 -
1680791063.167255-CDS-D-mesarthrocarpus_Contig9080:4576..46601680791063.167255-CDS-D-mesarthrocarpus_Contig9080:4576..4660Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9080 4577..4660 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791063.182619-UTR-D-mesarthrocarpus_Contig9080:4660..46631680791063.182619-UTR-D-mesarthrocarpus_Contig9080:4660..4663Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9080 4661..4663 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9080.2.1prot_D-mesarthrocarpus_Contig9080.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9080 2475..4660 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9080.2.1

>prot_D-mesarthrocarpus_Contig9080.2.1 ID=prot_D-mesarthrocarpus_Contig9080.2.1|Name=mRNA_D-mesarthrocarpus_Contig9080.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=141bp
MERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEV
ARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQA
ALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQVS
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mRNA from alignment at D-mesarthrocarpus_Contig9080:2475..4663-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9080.2.1 ID=mRNA_D-mesarthrocarpus_Contig9080.2.1|Name=mRNA_D-mesarthrocarpus_Contig9080.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2189bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9080:2475..4663- (Discosporangium mesarthrocarpum MT17_79)
GAGATGGAGCGGACCCTCATGTCCAAGATGCACACCCACGACAAGCGACA GTTTCGAGCGGGAGCCCTGATCACAGCGCTGTTCACGGTACGGCCGGCAC TCAGCATGTGTTTGTGCCTGTGGCGATGAACCCACCCATAGGGAGGCGAA CACGAAAGCATAGCTCTTGCTAGTTTTGATAGCTCCTCCTCTTTGTTGCG GTTAAGGGCTAGGGTTAGGGTTAGGAGTAGGGGTAGGGGTAGGGGTACGG TTCGGGTTAGTATACTGGGGTTGGCATACTACTGCAGCATTAATGTGCGC TTCAAACCTTACACTAGGAGTGCCTCAGCGGCGCCTCAAACGGCGCTACG CTGCAATGCGGACCTGGTGAATGGGGGCCGGGAGGAGGATGGGATTTTTT TGGGGTGTGCAGATGTCCGTCTGCTTCTCATCTCTTTTTGCCCCCGTTTG TGGCTGTTGTGTGGTTGATCTGGGAACAGTGGTGCGAGGGATAAGGTTAC AGTAGCTTTTTGTGTACCCCCTGGTTTCTGTGGGTGCACCAAGTCGCAGG AAGGACGAGAAGCAGCTGCTGCTCAAGACCATCGTGGTGTCGAGCAATCT CCGAGTGGAGCTCTTGGGCTCCAGGCTCCGGAGTCCTGCCTGCCCAGAGC TGTCTTTGACTTTCATCGCCACACCCCCCACATGCACCTACTTTATAGTG CTCTGTACACATGAGAACCTTGCTTTTTTGCTGTCCCCATCCACCCCTCG CGTGGAACACTCACACAGACACATGAAAAAACACCGTGTGGCTTTGTGGG TCGTGGTTAGGGTCGTTGCAGCCACTTCCTGTCCTGGCAATGGTGTGCTG CACACGCTTGTGATTTTTTTTTTTTTGCCGCCCCTCTGTCCGTGGTCCCC TGTCCTCCAGGTGTGGGTCTTGAGCGTGTTTGGAACAGAGATCCGCAAGT ATTTTGCCAATCAGACGGCTGAGGTGGCCAGGGAGACGCTGAAGCATGAG TCTCTCCAGGTATTTTAGAGGATTTTTTTTTTATTACTTGCTGCCCCCTG TTTGTTGAGGCTTTTGTGCGTAGGTTCCTGTTGACCAGACAGTCAAGGTG ACCAAGGAGATGCCGAAGCACAAGTGTCTCCAGGTATTCGTTTTTTTTTC TTTTATGCCTCTGTCTGTTGGGGTTTTCCTTGCTTAGCAGGCATTTTTCT TCCCTTCGCGCGTGGGACAGGGTTTTTCGTTGTTGCTGTGTCCCTGGCGT CTGCTGCCAAGCCCTTTTTTGTGGATTGGCAGGCCCTGTGAAGGCTATTA TTGTTTGCTTACCCACAGAGCTTGGGTCAATCAGGGCATGGAACGTGAAC ACTGTTGGAAAGTGCTTGTTTTGGTCATATAGGCAGGAAGTACGGTCTCA TGTTCGTTGATTCAATTCTGAGCCACAGTCCTGGGATCTTTGACAGGGCG TGTGGGCATGGATTTTTGCATGGTAGAGCTAACCCTCCTTCAAGTTGAAG TTGTGCGCACCGCATGCATGTGCCGGGTACTTGGTATGTACATGGTGCTG CTCTTGTGCTGTGTTGCTGTTGAAGATGTGGGTTGGTCTTGCCAGGTGGA GACCCTATACGCGTGCGTGCTCATCACGATAAAGATTGTGCTGAGGACTC TCCCCTCTTTTTGTCCGCTGTCATGGTTGCCTTTTTCACTACCCCCTCCC CCCCGCACCCGTGGGACACAGGTTCAGACGCAAGAGCTGGCGACCGCTCT CATGCAGGCCCTTCTGAATGACCAGGAGGTACGCTGTGAAACGCTGCGAA TGTTAGTCCAGAGGGTTTTTTTATGGAACCAGGGGGTCCAGCAACCGTGC CGTTTCATCTTTCCAACCGAGGCGATGGCGTGCCGTGCTTTCTTTTGGTT CCTATTTTCCTCTCCGCGCCGTACACTCACTCCCTGCGTGCAGACGCCCC GCTGAACCCTCCCCTTCCCTGCACCTGGCCCTCTCTCTTACTCACAACTT TCGCAGGTGATCGGGGCAGGGGCTCTTTTCCTGAGGGAGGCGTCCTCCAA CCCGGAGACACAAGCCGCCCTGGTCAGCCTTGCTGTCCATGTACTGCAGC ACCCGGACACCCTGGGGGAGGTCAACATCCTGGCCAAGAAGCTTGTCAAG GCTATCCTTGCTGACCCGGAGACGTTGGAACAGGTAAGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9080:2475..4663-

>mRNA_D-mesarthrocarpus_Contig9080.2.1 ID=mRNA_D-mesarthrocarpus_Contig9080.2.1|Name=mRNA_D-mesarthrocarpus_Contig9080.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=423bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9080:2475..4663- (Discosporangium mesarthrocarpum MT17_79)
ATGGAGCGGACCCTCATGTCCAAGATGCACACCCACGACAAGCGACAGTT
TCGAGCGGGAGCCCTGATCACAGCGCTGTTCACGGTGTGGGTCTTGAGCG
TGTTTGGAACAGAGATCCGCAAGTATTTTGCCAATCAGACGGCTGAGGTG
GCCAGGGAGACGCTGAAGCATGAGTCTCTCCAGGTTCAGACGCAAGAGCT
GGCGACCGCTCTCATGCAGGCCCTTCTGAATGACCAGGAGGTGATCGGGG
CAGGGGCTCTTTTCCTGAGGGAGGCGTCCTCCAACCCGGAGACACAAGCC
GCCCTGGTCAGCCTTGCTGTCCATGTACTGCAGCACCCGGACACCCTGGG
GGAGGTCAACATCCTGGCCAAGAAGCTTGTCAAGGCTATCCTTGCTGACC
CGGAGACGTTGGAACAGGTAAGC
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