mRNA_D-mesarthrocarpus_Contig9080.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A6H5K116_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K116_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.850e-48 Identity = 90/116 (77.59%), Postives = 103/116 (88.79%), Query Frame = 1
Query: 1 EMERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDT 348
EMER LMS+MH DK +FRA L + L +WVLS+FGTEIR+YFA+QTAEVARETLK E+LQVQTQELATAL+QALLNDQEV+ AGALFLREAS+N ETQAALVSLA++VLQHPDT
Sbjct: 229 EMERNLMSRMHAQDKNRFRAVGLSSLLILIWVLSMFGTEIRRYFASQTAEVARETLKVEALQVQTQELATALVQALLNDQEVVRAGALFLREASANSETQAALVSLALYVLQHPDT 344
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A835YV69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV69_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.000e-44 Identity = 75/134 (55.97%), Postives = 106/134 (79.10%), Query Frame = 1
Query: 1 EMERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILAD 402
+ME LM++M TH+K +FR A++T L +WV + FG EIR + QTAEVARETLKHE++Q+QTQELA A++ LLND +V+ A ++FL++A+S+P+TQAA+VSLA HVLQHPDTL EV+ LA+KL+ ++ +
Sbjct: 4 DMEAKLMARMRTHNKGRFRTAAIVTVLTVIWVFNTFGKEIRVWMGGQTAEVARETLKHEAIQIQTQELAMAVVNTLLNDPKVLAATSVFLQDAASDPDTQAAIVSLASHVLQHPDTLQEVHALAQKLIAQLVKE 137
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: D7FTZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ2_ECTSI) HSP 1 Score: 123 bits (308), Expect = 3.000e-32 Identity = 64/81 (79.01%), Postives = 74/81 (91.36%), Query Frame = 1
Query: 184 QVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQVS 426
QVQTQELATAL+QALLNDQEV+ AGALFLREAS+NPETQAALVSLA++VLQHPDT E +LAKKL+KAIL DP+T+ QV+
Sbjct: 15 QVQTQELATALVQALLNDQEVVRAGALFLREASANPETQAALVSLALYVLQHPDTRAETKVLAKKLIKAILDDPDTVLQVT 95
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A7S3UXV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXV6_HETAK) HSP 1 Score: 124 bits (312), Expect = 1.610e-31 Identity = 62/140 (44.29%), Postives = 92/140 (65.71%), Query Frame = 1
Query: 7 ERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQVS 426
E LM ++H ++ +FR L T L W+ + FG EI +F QTAEVA+ETL+ ESLQ+QTQELATA++Q LLND +V+ +FL+EA+ N ET+ ALV L + +LQH +T+ E L +K+V + +P + ++
Sbjct: 113 EEYLMKRIHIGNQNRFRTAVLGTILTCCWLTATFGQEIYSFFTKQTAEVAKETLRQESLQIQTQELATAIVQTLLNDDQVMKNATIFLKEAAGNEETKKALVGLGLFILQHEETMREAVELGRKIVVQLSKEPSVINNIA 252
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A7R9YAX6_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAX6_9STRA) HSP 1 Score: 122 bits (305), Expect = 6.030e-31 Identity = 64/134 (47.76%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 1 EMERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILAD 402
E+E LM + Q R AL TVWV SVFG IR++F+ QTAEVARETL++E LQ +TQELA A+++ +LND++++ F+R + + + ALV LA+H+LQH DTL EV +L KLV IL D
Sbjct: 54 EIEARLMRTTRASNVEQIRLALTAAALVTVWVFSVFGRHIRRFFSKQTAEVARETLENEELQARTQELAAAVVRTILNDEDILVKITAFIRNTADDDNLRDALVQLALHILQHDDTLAEVKVLGLKLVDYILKD 187
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A1V9YHQ0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YHQ0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.170e-19 Identity = 47/108 (43.52%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 97 LSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQ 420
L F E++ + TAEVA ETL++E+LQ+QTQELA+ ++Q +LND +V+ F++ S + TQ ALV+L +VL +P T+ +V L+K+L+ +L DP TL Q
Sbjct: 30 LIAFAPELKNSMSKTTAEVASETLQNENLQIQTQELASQIVQTVLNDPKVLNQALQFIKNLSESEITQTALVNLTSNVLNNPQTMAQVTKLSKQLLLNLLQDPTTLRQ 137
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A6G0XYN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYN6_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 6.930e-18 Identity = 54/131 (41.22%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 28 MHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQ 420
M+ K G I A+ V V++ FG E+R TAEVA ETL++ESLQ+QTQELA+ ++Q +LND +V+ ++FL++ + T ALV L +VL P T V LAK+++ + DP TL Q
Sbjct: 77 MNMQGKNWNAWGLGILAIGAVGVVA-FGPEMRSKMTKTTAEVATETLQNESLQIQTQELASQIVQTVLNDPKVLDQASVFLKKLFAMEMTHVALVHLTSNVLNDPQTSAHVTKLAKQILFNLFQDPHTLRQ 206
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A485KNS4_9STRA (Aste57867_9680 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNS4_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.120e-17 Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 88 VWVLSVFGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQ 420
V+ + FG E+R TAEVA ETL++ESLQ+QTQELA+ ++Q +LND +V+ FL++ + T ALV L VL P TL V LAK+L+ + DP TL Q
Sbjct: 103 VFXMIAFGPEMRSKMTKTTAEVATETLQNESLQIQTQELASQIVQTVLNDPKVLDQACHFLKKLFAMEMTHVALVQLTSGVLNDPQTLAHVTKLAKQLLFNLFQDPTTLRQ 213
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A482RWR5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWR5_9ARCH) HSP 1 Score: 81.6 bits (200), Expect = 1.260e-17 Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 157 RETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILAD 402
+ETLK+E+L+VQTQELATA++Q +LND + + FL EA+ P TQ ALV L VHVLQH DTL +LA KLV + D
Sbjct: 2 QETLKNEALKVQTQELATAVVQTILNDPAIALHASAFLAEATKAPLTQEALVQLTVHVLQHEDTLRAAQLLATKLVALLAQD 83
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Match: A0A024UV14_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV14_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 4.860e-14 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 106 FGTEIRKYFANQTAEVARETLKHESLQVQTQELATALMQALLNDQEVIGAGALFLREASSNPETQAALVSLAVHVLQHPDTLGEVNILAKKLVKAILADPETLEQ 420
FG E+R TAEVA ETL++ESLQ+QTQELA+ ++Q +LND +V+ + FL++ + T+ A+V L TL V L+K+++ + DP TL Q
Sbjct: 96 FGPEMRSKMTKTTAEVATETLQNESLQIQTQELASQIVQTVLNDPKVLDQASQFLQKLMAMDATRGAMVQLXXXXXXXXXTLAHVTKLSKQILFNLFQDPATLRQ 200 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9080.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9080.2.1 >prot_D-mesarthrocarpus_Contig9080.2.1 ID=prot_D-mesarthrocarpus_Contig9080.2.1|Name=mRNA_D-mesarthrocarpus_Contig9080.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=141bp MERTLMSKMHTHDKRQFRAGALITALFTVWVLSVFGTEIRKYFANQTAEVback to top mRNA from alignment at D-mesarthrocarpus_Contig9080:2475..4663- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9080.2.1 ID=mRNA_D-mesarthrocarpus_Contig9080.2.1|Name=mRNA_D-mesarthrocarpus_Contig9080.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2189bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9080:2475..4663- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9080:2475..4663- >mRNA_D-mesarthrocarpus_Contig9080.2.1 ID=mRNA_D-mesarthrocarpus_Contig9080.2.1|Name=mRNA_D-mesarthrocarpus_Contig9080.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=423bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9080:2475..4663- (Discosporangium mesarthrocarpum MT17_79)back to top |