prot_D-mesarthrocarpus_Contig903.4.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig903.4.1
Unique Nameprot_D-mesarthrocarpus_Contig903.4.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length92
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig903.4.1 vs. uniprot
Match: D8LQ87_ECTSI (Contains similarity to extensin (AtExt1) from Arabidopsis thaliana n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ87_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 7.590e-8
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:    2 DDNLVRLVALAADMLMATIVHDCSRYRDMRIR-----GGSAPVLMDESTGEKQTLTKADLMCSLEERGIVTFDSELLVLKAGQEALSA 84
            +  +V L++LAAD L+A+IVH+ S +R++R++     G  A  L+ E   E Q LT  DL  SL  RGIV  DS LLV  AG  A++A
Sbjct:  354 NSQIVTLMSLAADHLVASIVHESSIFRNVRLQQAREQGREAAELLGE---EGQMLTNEDLSLSLLSRGIVVSDSGLLVKAAGPAAVAA 438
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BLAST of mRNA_D-mesarthrocarpus_Contig903.4.1 vs. uniprot
Match: A0A6H5L6F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F2_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 7.650e-8
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:    2 DDNLVRLVALAADMLMATIVHDCSRYRDMRIR-----GGSAPVLMDESTGEKQTLTKADLMCSLEERGIVTFDSELLVLKAGQEALSA 84
            +  +V L++LAAD L+A+IVH+ S +R++R++     G  A  L+ E   E Q LT  DL  SL  RGIV  DS LLV  AG  A++A
Sbjct:  391 NSQIVTLMSLAADHLVASIVHESSIFRNVRLQQAREQGREAAELLGE---EGQMLTNEDLSLSLLSRGIVVSDSGLLVKAAGPAAVAA 475
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig903.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ87_ECTSI7.590e-844.32Contains similarity to extensin (AtExt1) from Arab... [more]
A0A6H5L6F2_9PHAE7.650e-844.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig903contigD-mesarthrocarpus_Contig903:12587..13926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig903.4.1mRNA_D-mesarthrocarpus_Contig903.4.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig903 12517..14745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig903.4.1 ID=prot_D-mesarthrocarpus_Contig903.4.1|Name=mRNA_D-mesarthrocarpus_Contig903.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=92bp
MDDNLVRLVALAADMLMATIVHDCSRYRDMRIRGGSAPVLMDESTGEKQT
LTKADLMCSLEERGIVTFDSELLVLKAGQEALSADRDANAA*
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