mRNA_D-mesarthrocarpus_Contig1087.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1087.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig1087.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1087.5.1 vs. uniprot
Match: D7FND3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND3_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 2.070e-34
Identity = 96/204 (47.06%), Postives = 120/204 (58.82%), Query Frame = 1 
Query:   79 GYGLDHGVAELVLERLLSSEAFSLPVSQGQARERAGPKHKNNGGEGWEGAATPDSGSLLS--LNAAGGDRITDSXXXXXXXXXTDRRVRVYSRSGALTN-----GLGRRDTLLSAQVLDANATLVGLTIEAVGSLAEVARRGFGEPFLMRALYPLLEKVAAPHPVVAVAAVSALRRIRVACGPFNDLPGLLEANMDYIVDDVVK 669
            G  L  G+A  +LERLL+S  F+LPVS+ +A          +G  G  GAA  +  SLL+   NA  G+R               RR   Y+RSG +       G   R   +S QVLDANATLV   +EA+GSLAE +  G GE FL RALYPLLEK A+ HPVV+ +A++ L R+RVACG F D   LLEANMDY+VDDVV+
Sbjct:  790 GMFLGRGLAISMLERLLASHTFNLPVSRAEAAAAG-----YSGSYGNVGAADFERESLLTSGANAGEGER--------GDVAALARRSVEYTRSGQVLGVGGDGGARSRSRGVSGQVLDANATLVSTVVEALGSLAEASGPGCGEAFLRRALYPLLEKAASTHPVVSQSALATLARVRVACGDFEDTSQLLEANMDYVVDDVVR 980
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BLAST of mRNA_D-mesarthrocarpus_Contig1087.5.1 vs. uniprot
Match: A0A6H5KT26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT26_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 2.150e-34
Identity = 94/202 (46.53%), Postives = 119/202 (58.91%), Query Frame = 1 
Query:   79 GYGLDHGVAELVLERLLSSEAFSLPVSQGQARERAGPKHKNNGGEGWEGAATPDSGSLLSLNAAGGDRITDSXXXXXXXXXTDRRVRVYSRSGALTNGLGRRDTL-----LSAQVLDANATLVGLTIEAVGSLAEVARRGFGEPFLMRALYPLLEKVAAPHPVVAVAAVSALRRIRVACGPFNDLPGLLEANMDYIVDDVVK 669
            G  L  G+A  +LERLL+S AF++PVS+ +A          +G  G + AA  +  SLL+  AAG                  RR   Y+RSG +    G   T      +S QVLDANATLV   +EA+GSLAE +  G GE FL RALYPLLEK A+ HPVV+ +A++ L R+RVACG F D   LLEANMDY+VDDVV+
Sbjct:  841 GIFLRRGLAISMLERLLASHAFNVPVSRAEAAAAG-----YSGSYGNDSAADFERESLLTSGAAG-------EGENGGVAALSRRPVEYTRSGQVLGAGGDGGTRSPSRGVSGQVLDANATLVSTIVEALGSLAEASGPGCGEAFLRRALYPLLEKAASTHPVVSQSALATLARVRVACGDFEDTSQLLEANMDYVVDDVVR 1030
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BLAST of mRNA_D-mesarthrocarpus_Contig1087.5.1 vs. uniprot
Match: A0A024TIH1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TIH1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.490e-8
Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 1 
Query:  430 VGLTIEAVGSLAEVARRGFGEPFLMRALYPLLEKVAAPHPVVAVAAVSALRRIRVACGPFNDLPGLLEANMDYIVDDVV 666
            + + +E VGS+A+     F  P LM  LYPL+E++  P P+V  AA++ L R+  +C   + +P LL ANMDY+VD +V
Sbjct:  573 MSILVEIVGSIAQALAAAFC-PLLMHVLYPLVEQLGRPSPIVQQAALATLARLAYSCNFHSSVPKLLHANMDYVVDMLV 650
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BLAST of mRNA_D-mesarthrocarpus_Contig1087.5.1 vs. uniprot
Match: A0A3R7DAR9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7DAR9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.520e-6
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1 
Query:  430 VGLTIEAVGSLAEVARRGFGEPFLMRALYPLLEKVAAPHPVVAVAAVSALRRIRVACGPFNDLPGLLEANMDYIVDDVV 666
            + + +E VGS+A+     F  P LM  LYPL+E++  P PVV  AA++ L RI   C     +  LL+ANMDY+VD +V
Sbjct:  512 LSVVLEIVGSIAQALGVAF-RPLLMHVLYPLVEQLGRPSPVVQQAALATLERIAFFCDS-QSVSALLQANMDYVVDMLV 588
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BLAST of mRNA_D-mesarthrocarpus_Contig1087.5.1 vs. uniprot
Match: W4GHP7_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHP7_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.620e-6
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1 
Query:  430 VGLTIEAVGSLAEVARRGFGEPFLMRALYPLLEKVAAPHPVVAVAAVSALRRIRVACGPFNDLPGLLEANMDYIVDDVV 666
            + + +E VGS+A+     F  P LM  LYPL+E++  P PVV  AA++ L RI   C     +  LL+ANMDY+VD +V
Sbjct:  574 LSVVLEIVGSIAQALGVAF-RPLLMHVLYPLVEQLGRPSPVVQQAALATLERIAFFCDS-QSVSALLQANMDYVVDMLV 650
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1087.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FND3_ECTSI2.070e-3447.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT26_9PHAE2.150e-3446.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024TIH1_9STRA2.490e-841.77Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A3R7DAR9_9STRA1.520e-643.04Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
W4GHP7_9STRA1.620e-643.04Uncharacterized protein n=8 Tax=Aphanomyces astaci... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1087contigD-mesarthrocarpus_Contig1087:4411..8218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog157072.XP_008878179.1
Preferred nameTTI1
Model size715
Max annot lvl2759|Eukaryota
KEGG koko:K12815,ko:K20403
KEGG Pathwayko03040,ko04150,map03040,map04150
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0006325,GO:0006338,GO:0006996,GO:0007154,GO:0007267,GO:0008150,GO:0009966,GO:0009987,GO:0010646,GO:0016043,GO:0023051,GO:0023052,GO:0030154,GO:0031931,GO:0031932,GO:0031974,GO:0031981,GO:0032006,GO:0032502,GO:0032991,GO:0038201,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045165,GO:0045168,GO:0046331,GO:0048583,GO:0048869,GO:0050789,GO:0050794,GO:0051276,GO:0065007,GO:0070013,GO:0070209,GO:0071840,GO:1902531
Exons6
Evalue4.08e-09
EggNOG OGsKOG4524@1|root,KOG4524@2759|Eukaryota
EC3.6.4.13
Descriptionregulation of TOR signaling
Cds size714
COG categoryL
BRITEko00000,ko00001,ko01000,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1087.5.1prot_D-mesarthrocarpus_Contig1087.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1087 4411..8218 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789218.9722502-CDS-D-mesarthrocarpus_Contig1087:4410..45241680789218.9722502-CDS-D-mesarthrocarpus_Contig1087:4410..4524Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1087 4411..4524 +
1680789218.9843526-CDS-D-mesarthrocarpus_Contig1087:5024..50911680789218.9843526-CDS-D-mesarthrocarpus_Contig1087:5024..5091Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1087 5025..5091 +
1680789218.997293-CDS-D-mesarthrocarpus_Contig1087:5905..61291680789218.997293-CDS-D-mesarthrocarpus_Contig1087:5905..6129Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1087 5906..6129 +
1680789219.009296-CDS-D-mesarthrocarpus_Contig1087:7170..72961680789219.009296-CDS-D-mesarthrocarpus_Contig1087:7170..7296Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1087 7171..7296 +
1680789219.0233614-CDS-D-mesarthrocarpus_Contig1087:7738..78411680789219.0233614-CDS-D-mesarthrocarpus_Contig1087:7738..7841Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1087 7739..7841 +
1680789219.0338585-CDS-D-mesarthrocarpus_Contig1087:8138..82181680789219.0338585-CDS-D-mesarthrocarpus_Contig1087:8138..8218Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1087 8139..8218 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1087.5.1

>prot_D-mesarthrocarpus_Contig1087.5.1 ID=prot_D-mesarthrocarpus_Contig1087.5.1|Name=mRNA_D-mesarthrocarpus_Contig1087.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=238bp
SQSLEAAEGGLGEEEGERGGEGEKGVGYGLDHGVAELVLERLLSSEAFSL
PVSQGQARERAGPKHKNNGGEGWEGAATPDSGSLLSLNAAGGDRITDSVT
DSVTGSVTDRRVRVYSRSGALTNGLGRRDTLLSAQVLDANATLVGLTIEA
VGSLAEVARRGFGEPFLMRALYPLLEKVAAPHPVVAVAAVSALRRIRVAC
GPFNDLPGLLEANMDYIVDDVVKSAGVPGLGGRGGRRG
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mRNA from alignment at D-mesarthrocarpus_Contig1087:4411..8218+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1087.5.1 ID=mRNA_D-mesarthrocarpus_Contig1087.5.1|Name=mRNA_D-mesarthrocarpus_Contig1087.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3808bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1087:4411..8218+ (Discosporangium mesarthrocarpum MT17_79)
TCACAGTCACTGGAGGCAGCAGAAGGGGGGTTGGGGGAGGAGGAGGGGGA
GCGGGGAGGGGAAGGGGAGAAGGGAGTTGGGTATGGGCTGGATCACGGGG
TGGCGGAGTTGGTGGTGAGTGGGGTAGGTGCACTTAACCTACCTAGCGCC
AGCCCTCATGCGCATTGTGTGCTGTCCTTCAGGAGTGCAAACACTGTGTT
TTTCTTCCGGTACTTTTTCTTTGAAGTGAAGAGTCAAGGTTACTCGCCCT
TCAAAATCGCTGTCGCCTTTCCAGCCCAGAGCCGGTTTTTTGCCGCGGTA
AGGGGACGGGGGATGGGGTGGGGAGGAGGGGGATGACGCCGGGAGACGAT
TTCATAACCCATCTGTCGGGCTGATTTTTAACGGAATAGCCACCCAAGCG
ACTGCAGATGGAAAGGGTTAGGGTTAGGGTTAGGGTTAGGACACACACAC
TGCCGACATCACTGGCGCTGCTTTTCTGCTCCAGAGCTCATCGTGACCAC
TACAGGAAACCGACGGCAGCATTTGGTCGGCACGTCACGCCTCTCCAACT
GACCTGCCGTGCCTCCCTGTCCCTACTCCCCTGTTGCCATGTATCCCCAC
AACACTCACCGAAGCTGGAACGCCTGCTCTCCTCAGAAGCTTTCAGTCTG
CCGGTATCTCAAGGCCAAGCACGGGAGAGAGGTGCTTCTGTACTGACTTA
GGCCTAGCCTTAGCCTTAGCCTTAGGGTTAGGGGTAGGGGTAGGGGTAGG
GTTAGGGGGGGGGGCGACTGTGATGCCACGGTGTGCCATAGATGGGATGT
ACTCCAAGAAATGCTAGCCAATCATGCCTGTGGAGGAGAAAAAATGTCAG
AAAACCACTTGAGGTGCCCTTGTTTCTTCTTCCTTTAGTCTCTTCAGTTT
ATTTCTTTTTTTCCTTGAAGTTCTTGTGTGCTTGTTGAAGGTTTTTCCCG
TTTTTTTTCAGATATTTTGTTGTAACTCAGCTTCTCGCACAGATGTTCCC
TTGTAGGCGTTTTTTTTGCATCCCTTGTCCATTGTGTGCAGCAATTCCAG
ATCCACAAAAAAAGAAAAGATTGGCACTGTTGCTAGCTCCAGAGCACCAC
CTCTAGGGCTATACTCTGCCTCGAACTGAAGCAATCAGGCCTTCTCTTGC
TCATACCCCATCCAACCTCCACAGATAGGCAAAATAGCAGAACATTAAAA
CAGAATTTCACCCGTGACTGCTACCTCTCTCTGTCTTTGTCTCTTTCTCT
TTCTCTCTCTGTCTGTCCCTCTCTCGTTCTCTCTCTCTTTTTCTCTCTCT
TTCACTCTCTTTTTCTCTGCCTTTTTCTCTCTCTCTATCTCTCTGTGTCA
TTCTCTCTCTTTCTCTCTTTCACTCTCTCTTACTCTGTCTTCCTCTTTCT
CTGTCTTTGTCTCTCTCTCTTTCTCTCTTCCTTTCACTCTCTATCTCTCT
GTATCTCTCTGTCTCTATCTGTCTGTGCCTCTTGTCTCTAATCAGCGGGT
CCAAAACATAAGAACAATGGTGGGGAGGGGTGGGAAGGGGCAGCAACGCC
AGACTCAGGATCTTTGTTGTCACTCAATGCCGCGGGGGGTGATAGAATAA
CAGACAGTGTAACCGACAGTGTAACCGGCAGTGTAACCGACAGGCGTGTG
CGGGTGTACTCGCGGTCTGGTGCCTTAACTAATGGCTTGGGCCGGAGGGA
CACACTTTTATCGGCCCAGGTGGGTGCATGGACGCAGGCCCGACCATTGG
TAATGCGTGTCACACCAAAGAGGGGAGGATCGGGGAGGGGGGGAGGGAGG
AGGTTTTGGTCAATGATCCAAAGTGCTCTGTGGCTCTGATCCTTGTCGAA
ATGTGTGTGGACATCCTCCGGGGTATGAAGAAGTTTTTTTTTGTTTATTT
TAGAGTGGTATGCAAGATTGCGGGGGGGGGTGCTGTTTGGTAGAAGAGAT
CAAGGGAAAAGGTTTTGCTCCTTGGCTGCAGCTAGAACGCCTGGTTCTAG
GTATGTATGTGCCCTGTGAGCTATATATGTACTTAACAGCTGCATTAATG
TGTAGAAGCACATGGGGGGGGGTTATTTCTCTACTGTGGTGCACTTCAGT
AGCATCTCCTGTGCTTTGGAGTGCTCTACTCCATAATATTATCAATGTGA
TACTGCTATAGAGCACATACAAACGTGTGTTAAACTGCTACAGAGCATGA
ACTACAGTACTTCATACGCTACTTAGTGTGTGCTACAGCACTCCTACAGA
GCACGTATTTGAAAGAAAAATGATCCGTTTGCCTCATTTGCTGTTATTTG
TTGTGCTTCCTACCTCTACCCAAATAATCCAGACTCTCACCTCAGGGACA
CAAGTGACAATAAACCCATGCTTTTATCATTGCCCACCCACTCCCGTAGC
CCTTCCATGTGCCCGGAGCTCTAGGTCAGCGCGTGCCTACCAACCCTTGG
CCTGCGGTAGGCCTCCAGATACATTAGAGGTCTACAGTAAAGAGCCAATG
ATATTCCGCTCATTTTGAGAGCACAGAGTGTTGTTCCAGTGCTGTCCTTT
CTGTCTCCTCCACCCCCCTGCCCCCCCCCCCCGACCTCCAGACACTCACA
TTCTTCCTCTTGTTTGCCCTGCAGCAAGGCCCAATGCTGCACCCAGGACA
GTTGGGCAAGCACGTGCTCAAGAGCACGTCATCCCTCCTGGTCCTTCTCA
TTTTGTCTTGTGTTCCCCACCTCCCCGCTGTATGTCCGGCTGACGCCGCC
CCCCCCCCAGGTGTTGGATGCCAATGCCACCCTGGTGGGGCTCACCATAG
AGGCTGTGGGGTCCCTGGCAGAGGTGGCCAGGAGGGGTTTTGGCGAGCCC
TTCCTCATGCGGGCCCTCTACCCGCTCCTGGAAAAGGTGGATGCTTTGGC
GTGTTGATTGCTTCCAAGAACCTCAGTGGAACCACCTGCTGTAACTGTAC
CATACCGACTGCAGGAGTGGGCAGAACAACCCCGAACCCTAACCCTAACC
CAGAGTCCCACGAAAAATCGGAGTGCCGCGGATGAATAAAGATAAGTAGG
AGAAGGCAGAGGCCCAAGCCTATTCTCGGAGGCAAGGAGCAAGGGTGTAG
GTTCATGCTTCTCCCGTGCTCAGCAAGGAGGGTCAGGGTCAGGGGTCCGG
GTCAGGGTCAAGGTTAGGGTTACAAGCAACCCTCCTCAGAAGGGTATCGG
GAGGTTTTCCATCCTCTGGCGAGGCATGCCCCCCCCGTAACACCCCTCCA
ATGCATGCGCCTGCGATGTCCCCACTACAGCACCTTTGCTCACCTCTTCA
AGCTCATGCCCTCCCTGCCCACTGGCAGGTAGCAGCTCCTCACCCGGTGG
TTGCTGTGGCTGCTGTCTCGGCCCTGAGGCGCATCCGTGTGGCCTGTGGG
CCATTCAATGACCTCCCTGGTCTCTTGGAAGGTGGGCTGTGTCCCCTAGC
CTTTTTTTTTTTTTAACCCCCTGCCACCTCCCCCGCTTCTCTTCCTCATA
TACCCAGGGTGCATGACAGGGTACAGATGGTCCACCACAGGAAGGTACCT
TGGTGCCAGCGCCCCTGCGGCAGAATTTGGCCAGGATGTTTGAAACAAGT
GAAGGAGTGCGTAGTACACCCTTGACCCAGACCTTCCCTTATTGCTTCAT
CTTGGAGCACCCTTACCCCCCCCCCTTACCTCCTCCCCCCCCTTCCCCCC
TTGCCACTTGCACACATGTCCCTGGCAGCAAACATGGACTACATCGTTGA
TGACGTGGTCAAGAGTGCCGGGGTCCCTGGTCTTGGGGGGCGGGGAGGAA
GGAGAGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1087:4411..8218+

>mRNA_D-mesarthrocarpus_Contig1087.5.1 ID=mRNA_D-mesarthrocarpus_Contig1087.5.1|Name=mRNA_D-mesarthrocarpus_Contig1087.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=714bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1087:4411..8218+ (Discosporangium mesarthrocarpum MT17_79)
TCACAGTCACTGGAGGCAGCAGAAGGGGGGTTGGGGGAGGAGGAGGGGGA
GCGGGGAGGGGAAGGGGAGAAGGGAGTTGGGTATGGGCTGGATCACGGGG
TGGCGGAGTTGGTGCTGGAACGCCTGCTCTCCTCAGAAGCTTTCAGTCTG
CCGGTATCTCAAGGCCAAGCACGGGAGAGAGCGGGTCCAAAACATAAGAA
CAATGGTGGGGAGGGGTGGGAAGGGGCAGCAACGCCAGACTCAGGATCTT
TGTTGTCACTCAATGCCGCGGGGGGTGATAGAATAACAGACAGTGTAACC
GACAGTGTAACCGGCAGTGTAACCGACAGGCGTGTGCGGGTGTACTCGCG
GTCTGGTGCCTTAACTAATGGCTTGGGCCGGAGGGACACACTTTTATCGG
CCCAGGTGTTGGATGCCAATGCCACCCTGGTGGGGCTCACCATAGAGGCT
GTGGGGTCCCTGGCAGAGGTGGCCAGGAGGGGTTTTGGCGAGCCCTTCCT
CATGCGGGCCCTCTACCCGCTCCTGGAAAAGGTAGCAGCTCCTCACCCGG
TGGTTGCTGTGGCTGCTGTCTCGGCCCTGAGGCGCATCCGTGTGGCCTGT
GGGCCATTCAATGACCTCCCTGGTCTCTTGGAAGCAAACATGGACTACAT
CGTTGATGACGTGGTCAAGAGTGCCGGGGTCCCTGGTCTTGGGGGGCGGG
GAGGAAGGAGAGGG
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