mRNA_D-mesarthrocarpus_Contig10869.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: A0A7S1XMB5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMB5_9STRA) HSP 1 Score: 251 bits (640), Expect = 9.270e-82 Identity = 131/166 (78.92%), Postives = 143/166 (86.14%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRGDG-EHEASRRVKTELMVQMDG------------GGWGRAGSKTVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVLMFGPPGTGKT+LAKAVA+ECKTTFFNVSASTLGSKYRGESE+MVR LF+MARYYAPSTIFFDEID+LAGSRG+ EHEASRRVKTELMVQMDG G G A +KTVIVLAATN PWDLDEALRRRLEKRIYIPLPS GRK+LF+IN+ +VE+
Sbjct: 5 GVLMFGPPGTGKTLLAKAVASECKTTFFNVSASTLGSKYRGESERMVRTLFDMARYYAPSTIFFDEIDALAGSRGNANEHEASRRVKTELMVQMDGVSEAAGARDEDGDGDGGATNKTVIVLAATNMPWDLDEALRRRLEKRIYIPLPSATGRKQLFQINMREVEL 170
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: A0A6H5K2D2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D2_9PHAE) HSP 1 Score: 249 bits (637), Expect = 3.200e-80 Identity = 142/196 (72.45%), Postives = 145/196 (73.98%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRG-DGEHEASRRVKTELMVQMDG--GGWGRAGSK------------------------------------TVIVLAATNTPWDLDEALRRR----LEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVR+LFEMARYYAPSTIFFDEIDSLAGSRG DGEHEASRRVKTELMVQMDG GG TVIVLAATNTPW LDEALRRR LEKRIYIPLP++VGRKELFRINLGDVEV
Sbjct: 56 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGSRGSDGEHEASRRVKTELMVQMDGVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVIVLAATNTPWSLDEALRRRVQRRLEKRIYIPLPTEVGRKELFRINLGDVEV 251
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: D8LRZ3_ECTSI (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ3_ECTSI) HSP 1 Score: 255 bits (652), Expect = 4.410e-78 Identity = 142/192 (73.96%), Postives = 145/192 (75.52%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRG-DGEHEASRRVKTELMVQMDG--GGWGRAGSK------------------------------------TVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVR+LFEMARYYAPSTIFFDEIDSLAGSRG DGEHEASRRVKTELMVQMDG GG TVIVLAATNTPW LDEALRRRLEKRIYIPLP++VGRKELFRINLGDVEV
Sbjct: 488 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGSRGSDGEHEASRRVKTELMVQMDGVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVIVLAATNTPWSLDEALRRRLEKRIYIPLPTEVGRKELFRINLGDVEV 679
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: A0A7S3YD60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD60_HETAK) HSP 1 Score: 241 bits (615), Expect = 1.970e-77 Identity = 128/163 (78.53%), Postives = 134/163 (82.21%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRGDG-EHEASRRVKTELMVQMDG---------GGWGRAGSKTVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVLMFGPPGTGKT+LAKAVAAEC+TTFFNVSASTL SKYRG+SEKMVRILFEMARYYAPSTIFFDEIDSLAGSRG EHEASRRVKTELMVQMDG VIVLAATN PWDLDEALRRRLEKRIYIPLP GR+ELFRIN+ D +V
Sbjct: 48 GVLMFGPPGTGKTLLAKAVAAECRTTFFNVSASTLSSKYRGDSEKMVRILFEMARYYAPSTIFFDEIDSLAGSRGSSSEHEASRRVKTELMVQMDGVTETSADXXXXXXXXXXXXVIVLAATNMPWDLDEALRRRLEKRIYIPLPCAEGRRELFRINMKDCDV 210
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: F0Y1I1_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1I1_AURAN) HSP 1 Score: 240 bits (612), Expect = 7.620e-77 Identity = 127/164 (77.44%), Postives = 138/164 (84.15%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRGDG-EHEASRRVKTELMVQMDG--GGWG--------RAGSKTVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTL SK+RGESEKMVR+LF+MAR++APST+FFDEIDSLAG RG EHEASRRVKTELMVQMDG GG G A +TVIVLAATNTPW+LDEALRRRLEKRIYIPLP+ GR LF IN+ V+V
Sbjct: 57 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLSSKWRGESEKMVRLLFDMARWHAPSTVFFDEIDSLAGQRGGANEHEASRRVKTELMVQMDGVAGGSGDAPEDAGAEAAPRTVIVLAATNTPWELDEALRRRLEKRIYIPLPTAAGRAALFEINMKSVDV 220
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: A0A7S2SSB0_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSB0_9STRA) HSP 1 Score: 247 bits (631), Expect = 8.480e-77 Identity = 127/168 (75.60%), Postives = 141/168 (83.93%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRG-DGEHEASRRVKTELMVQMDGGGWGR--------------AGSKTVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVLMFGPPGTGKTMLAKA+A+EC+TTFFNVSAS+LGSKYRGESEKMVR+LFEMARYYAPSTIFFDEID++AG+RG +GEHEASRRVKTELMVQMDG G +TVIVLAATN PWDLD+ALRRRLEKRIYIPLPS GR ELFRIN+ D+E+
Sbjct: 302 GVLMFGPPGTGKTMLAKAIASECRTTFFNVSASSLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDAIAGARGSEGEHEASRRVKTELMVQMDGVSSAADTEDGEQENEEENGPGKRTVIVLAATNRPWDLDDALRRRLEKRIYIPLPSTSGRAELFRINMHDIEL 469
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: W7U5R9_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5R9_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.600e-76 Identity = 131/172 (76.16%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRG-DGEHEASRRVKTELMVQMDGGGWG------------------RAGSKTVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVL+FGPPGTGKTMLAKAVA EC TTFFNVSASTLGSKYRG+SEKMVRILFEMARYYAPST+FFDEIDS+AGSRG GEHEASRRVKTELMVQMDG R GSKTVIVLAATN PWDLD+ALRRR+EKRIYI LP++ GRKELFRIN+ D+EV
Sbjct: 390 GVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEV 561
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: A0A4D9D8G0_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8G0_9STRA) HSP 1 Score: 249 bits (635), Expect = 5.770e-75 Identity = 131/172 (76.16%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRG-DGEHEASRRVKTELMVQMDGGGWG------------------RAGSKTVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVL+FGPPGTGKTMLAKAVA EC TTFFNVSASTLGSKYRG+SEKMVRILFEMARYYAPST+FFDEIDS+AGSRG GEHEASRRVKTELMVQMDG R GSKTVIVLAATN PWDLD+ALRRR+EKRIYI LP++ GRKELFRIN+ D+EV
Sbjct: 390 GVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAADEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEV 561
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: T1H5B0_MEGSC (AAA domain-containing protein n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1H5B0_MEGSC) HSP 1 Score: 231 bits (588), Expect = 6.430e-75 Identity = 118/154 (76.62%), Postives = 131/154 (85.06%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRG-DGEHEASRRVKTELMVQMDGGGWGRAGSKTVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVLM GPPGTGKTMLAKAVA EC TTFFNVS+STL SKYRGESEKMVR+LFEMAR+YAPSTIF DEIDSL RG + EHEASRRVK+EL+VQMDG G SK V+VLAATN PWD+DEALRRRLEKRIYIPLP+ GR+ L +INL +V+V
Sbjct: 16 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGVGGQEEASKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPTDEGREALLKINLREVKV 169
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Match: A0A1W4UJT6_DROFC (katanin p60 ATPase-containing subunit A-like 1 isoform X3 n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=A0A1W4UJT6_DROFC) HSP 1 Score: 232 bits (591), Expect = 4.330e-74 Identity = 118/154 (76.62%), Postives = 132/154 (85.71%), Query Frame = 1
Query: 1 GVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMARYYAPSTIFFDEIDSLAGSRG-DGEHEASRRVKTELMVQMDGGGWGRAGSKTVIVLAATNTPWDLDEALRRRLEKRIYIPLPSKVGRKELFRINLGDVEV 459
GVLM GPPGTGKTMLAKAVA EC TTFFNVS++TL SKYRGESEKMVR+LFEMAR+YAPSTIF DEIDSL RG + EHEASRRVK+EL+VQMDG G G +K V+VLAATN PWD+DEALRRRLEKRIYIPLPS GR+ L +INL +V+V
Sbjct: 43 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPSDEGREALLKINLREVKV 196 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10869.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10869.1.2 >prot_D-mesarthrocarpus_Contig10869.1.2 ID=prot_D-mesarthrocarpus_Contig10869.1.2|Name=mRNA_D-mesarthrocarpus_Contig10869.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=152bp MFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRILFEMback to top mRNA from alignment at D-mesarthrocarpus_Contig10869:168..2947- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10869.1.2 ID=mRNA_D-mesarthrocarpus_Contig10869.1.2|Name=mRNA_D-mesarthrocarpus_Contig10869.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2780bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10869:168..2947- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10869:168..2947- >mRNA_D-mesarthrocarpus_Contig10869.1.2 ID=mRNA_D-mesarthrocarpus_Contig10869.1.2|Name=mRNA_D-mesarthrocarpus_Contig10869.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=456bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10869:168..2947- (Discosporangium mesarthrocarpum MT17_79)back to top |