mRNA_D-mesarthrocarpus_Contig10774.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10774.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10774.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10774.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10774contigD-mesarthrocarpus_Contig10774:464..1828 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size828
Hectar predicted targeting categorysignal peptide
Exons2
Cds size573
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789210.4032574-UTR-D-mesarthrocarpus_Contig10774:463..6941680789210.4032574-UTR-D-mesarthrocarpus_Contig10774:463..694Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10774 464..694 +
1680789210.4368224-UTR-D-mesarthrocarpus_Contig10774:1804..18281680789210.4368224-UTR-D-mesarthrocarpus_Contig10774:1804..1828Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10774 1805..1828 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789210.4141479-CDS-D-mesarthrocarpus_Contig10774:694..12131680789210.4141479-CDS-D-mesarthrocarpus_Contig10774:694..1213Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10774 695..1213 +
1680789210.4271667-CDS-D-mesarthrocarpus_Contig10774:1750..18041680789210.4271667-CDS-D-mesarthrocarpus_Contig10774:1750..1804Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10774 1751..1804 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10774.2.1prot_D-mesarthrocarpus_Contig10774.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10774 695..1804 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10774.2.1

>prot_D-mesarthrocarpus_Contig10774.2.1 ID=prot_D-mesarthrocarpus_Contig10774.2.1|Name=mRNA_D-mesarthrocarpus_Contig10774.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=191bp
MLLQSLAVFAVLCSLPSHGRVLSDRGLDGAPRGLWETSLPVFYPSQLPQH
QTPAQIHQRRLLGGLLSRGGAQYPLEQHGPRPQMSYRVRGGGDSMDETGI
PNLHWVSEQSGEGSTRNRRGKVWQRNKYLRWLSRKFFIMSSTVGGAQRDA
SRGLSMLAEICSSYREIQGLRLQHPLLLSCFKILGLPERQ*
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mRNA from alignment at D-mesarthrocarpus_Contig10774:464..1828+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10774.2.1 ID=mRNA_D-mesarthrocarpus_Contig10774.2.1|Name=mRNA_D-mesarthrocarpus_Contig10774.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1365bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10774:464..1828+ (Discosporangium mesarthrocarpum MT17_79)
GGAAACAATGAGTCTAGTGTTTTGGTGGGAAACGGCAATCAAAAGATTAA
TTGGACATGTTGGTCGTTCGCCAGTTCGCAATGCTTGTCGACAAGTTGTG
TCGAAGGATTCTTGGGTTTCTTGGTGTGACCCGCTTTTTACCATAACCCT
GTTGTGCTTTGTTCCTTGACTTGACGTGCGTGATGTTCTTGAAGATCGTC
CAAAAAGAGGATTGTGGCGACACACAAGTTGATGTTGCTGCAATCTCTGG
CGGTCTTTGCTGTCCTGTGCTCTCTGCCCTCTCATGGACGTGTGCTGAGC
GATCGAGGGTTGGACGGAGCCCCACGGGGGCTATGGGAGACCTCTCTGCC
TGTCTTTTACCCATCGCAACTACCGCAACATCAAACACCGGCTCAAATAC
ACCAACGCCGCTTGCTTGGGGGACTGCTGAGTAGAGGTGGGGCTCAGTAC
CCACTAGAGCAGCATGGTCCACGACCTCAGATGTCATATCGGGTCCGAGG
TGGGGGAGACTCTATGGACGAAACGGGAATCCCAAATTTGCATTGGGTAT
CCGAGCAAAGTGGTGAGGGTTCCACAAGAAACAGACGGGGGAAGGTCTGG
CAACGTAATAAGTACCTTCGCTGGCTCTCCAGGAAGTTTTTTATCATGTC
GTCCACCGTAGGGGGGGCGCAAAGAGACGCTTCGAGAGGGCTCTCGATGC
TGGCGGAGATCTGTTCTTCCTACCGCGAAATCCAGGGCCTTCGCCTTCAG
GTAGGATGGGAGGTATTGAACAGTCGAAGACGATCTCTGACGTTGTGATA
TCTCATTTCATGCCTTTTGGAGGTTGAGCGGTCCCGATCATTGAGGTCCC
GTGGGATGAACGGGATGTGAAATCTCCTTGACAAGAGCTGCCGTCCTTGG
AAGGCTTTGAGGTATATAGGGGCGCCGCTGCGACAAACCTCCCATCCCTC
CTATCTTACATCCCGGAGAATGATGTTGACCACCTAAAAAGAATGGCCTA
CGTTTTGTAAGGATCAGAGGAGGAAACCGACAGGCGTAGGACACAGAATT
GCTGGTACATTTTCGTATGATATTCTAGAGTCCGCGAGAGACTGTGCGCT
CAGTGACGCCTTGAGACCTTTGTTTCTTGCTCACGAATCCTAACCGTTCG
CGAAAGAGATATTTTATCTCATCATCCTTCGTATATCCGATACCCCCTTT
CAACCCCACCTTATCCTCAAACGGTTTTTGTCCGCTTGATCAGCTCGCCG
TCTTATTCTTACTCACGCTGGCAACTTGTGGCTTCAGCATCCTCTTCTCC
TTTCTTGTTTCAAGATTCTGGGACTCCCTGAGCGCCAATGAGCCAGAGGG
TTTCAAGCGTCTGCT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10774:464..1828+

>mRNA_D-mesarthrocarpus_Contig10774.2.1 ID=mRNA_D-mesarthrocarpus_Contig10774.2.1|Name=mRNA_D-mesarthrocarpus_Contig10774.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=573bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10774:464..1828+ (Discosporangium mesarthrocarpum MT17_79)
ATGTTGCTGCAATCTCTGGCGGTCTTTGCTGTCCTGTGCTCTCTGCCCTC
TCATGGACGTGTGCTGAGCGATCGAGGGTTGGACGGAGCCCCACGGGGGC
TATGGGAGACCTCTCTGCCTGTCTTTTACCCATCGCAACTACCGCAACAT
CAAACACCGGCTCAAATACACCAACGCCGCTTGCTTGGGGGACTGCTGAG
TAGAGGTGGGGCTCAGTACCCACTAGAGCAGCATGGTCCACGACCTCAGA
TGTCATATCGGGTCCGAGGTGGGGGAGACTCTATGGACGAAACGGGAATC
CCAAATTTGCATTGGGTATCCGAGCAAAGTGGTGAGGGTTCCACAAGAAA
CAGACGGGGGAAGGTCTGGCAACGTAATAAGTACCTTCGCTGGCTCTCCA
GGAAGTTTTTTATCATGTCGTCCACCGTAGGGGGGGCGCAAAGAGACGCT
TCGAGAGGGCTCTCGATGCTGGCGGAGATCTGTTCTTCCTACCGCGAAAT
CCAGGGCCTTCGCCTTCAGCATCCTCTTCTCCTTTCTTGTTTCAAGATTC
TGGGACTCCCTGAGCGCCAATGA
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