prot_D-mesarthrocarpus_Contig983.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig983.1.1
Unique Nameprot_D-mesarthrocarpus_Contig983.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length198
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: D7FVW1_ECTSI (Ribosomal RNA-processing protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW1_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 2.090e-10
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0
Query:  121 GSKGNKLSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDV 171
            GS   +LSELQ+RMR+KLEG QFRMINE LYTS S  SL KF+QEP LFDV
Sbjct:   45 GSGAPRLSELQKRMRQKLEGAQFRMINETLYTSESGVSLAKFKQEPELFDV 95          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: A0A6H5KX03_9PHAE (Ribosomal RNA-processing protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX03_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 2.360e-10
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0
Query:  121 GSKGNKLSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDV 171
            GS   +LSELQ+RMR+KLEG QFRMINE LYTS S  SL KF+QEP LFDV
Sbjct:  303 GSGAPRLSELQKRMRQKLEGAQFRMINETLYTSESGASLAKFKQEPELFDV 353          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: A0A2D4CAV6_PYTIN (ABC transporter lipid exporter ABCA1 family n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAV6_PYTIN)

HSP 1 Score: 61.6 bits (148), Expect = 1.260e-7
Identity = 27/54 (50.00%), Postives = 41/54 (75.93%), Query Frame = 0
Query:  127 LSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDVVSELGRFQS 180
            LS +Q+ MRR+L+GG+FRM+NE+LYT+  +E+   FQ +P LFDV ++  R+ S
Sbjct: 1654 LSRMQEEMRRRLDGGKFRMLNEQLYTTTGNEAFXSFQSDPELFDVATDYDRYCS 1707          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: A0A397FW16_9STRA (Ribosomal RNA-processing protein 8 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FW16_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.510e-7
Identity = 25/46 (54.35%), Postives = 37/46 (80.43%), Query Frame = 0
Query:  127 LSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDVV 172
            LS +Q++M+++LEGG+FRM+NE+LYT+   E+ + FQ EP LFD V
Sbjct:   68 LSAMQEQMKKRLEGGKFRMLNEQLYTTTGDEAFDSFQAEPELFDTV 113          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: A0A067D379_SAPPC (Ribosomal RNA-processing protein 8 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D379_SAPPC)

HSP 1 Score: 60.1 bits (144), Expect = 2.050e-7
Identity = 27/48 (56.25%), Postives = 38/48 (79.17%), Query Frame = 0
Query:  127 LSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDVVSE 174
            LS +Q++M+R+LEGG+FRM+NE+LYT+   E+ E+FQ EP LFD   E
Sbjct:   53 LSAMQEQMKRRLEGGKFRMLNEQLYTTTGGEAFEEFQAEPELFDTYHE 100          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: A0A8K1C374_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C374_PYTOL)

HSP 1 Score: 60.1 bits (144), Expect = 2.190e-7
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:  121 GSKGNKLSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDVVSELGRFQS 180
            G K   LS++Q+ MRR+L+GG+FRM+NE+LYTS   E+ + FQ +P LFDV  +  R Q+
Sbjct:   57 GKKLTGLSKMQEEMRRRLDGGKFRMLNEQLYTSTGKEAFKTFQSDPELFDVYHQGFREQA 116          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: A0A1V9ZZU1_9STRA (Ribosomal RNA-processing protein 8 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZU1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.470e-7
Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 0
Query:  121 GSKGNKLSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDVVSE 174
            G KG  LS +Q++M+R+LEGG+FRM+NE+LYT+  + + E+FQ+EP LFD   E
Sbjct:   31 GKKGG-LSAMQEQMKRRLEGGKFRMLNEQLYTTTGTAAFEEFQREPELFDTYHE 83          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: A0A1V9ZG95_9STRA (Ribosomal RNA-processing protein 8 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZG95_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.800e-7
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0
Query:  121 GSKGNKLSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDVVSE 174
            G K   LS +Q++M+R+LEGG+FRM+NE+LYT+   E+ E+FQ EP LFD   E
Sbjct:   47 GKKQAGLSAMQEQMKRRLEGGKFRMLNEQLYTTTGVEAFEEFQAEPELFDTYHE 100          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: UPI000900C0EA (ribosomal RNA-processing protein 8-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900C0EA)

HSP 1 Score: 55.8 bits (133), Expect = 7.570e-7
Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 0
Query:  122 SKGNKLSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDVVSELG 176
            SK NK S    +M+ +L GG FRMINE+LYT    E+L  F+Q+P LF VVS L 
Sbjct:   53 SKPNKTSSFIDKMKARLSGGHFRMINEKLYTCSGDEALNYFKQDPQLFSVVSLLS 107          
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Match: A0A024UTK9_9STRA (Ribosomal RNA-processing protein 8 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTK9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.650e-7
Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0
Query:  121 GSKGNKLSELQQRMRRKLEGGQFRMINERLYTSPSSESLEKFQQEPHLFDVVSE 174
            G   + LS +Q++M+++LEGG+FRM+NE+LYT+   E+ E FQ EP LFD   E
Sbjct:   58 GKSASGLSAMQEQMKKRLEGGKFRMLNEQLYTTTGEEAFESFQAEPDLFDTYHE 111          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig983.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVW1_ECTSI2.090e-1072.55Ribosomal RNA-processing protein 8 n=1 Tax=Ectocar... [more]
A0A6H5KX03_9PHAE2.360e-1072.55Ribosomal RNA-processing protein 8 n=1 Tax=Ectocar... [more]
A0A2D4CAV6_PYTIN1.260e-750.00ABC transporter lipid exporter ABCA1 family n=1 Ta... [more]
A0A397FW16_9STRA1.510e-754.35Ribosomal RNA-processing protein 8 n=2 Tax=Aphanom... [more]
A0A067D379_SAPPC2.050e-756.25Ribosomal RNA-processing protein 8 n=2 Tax=Saprole... [more]
A0A8K1C374_PYTOL2.190e-750.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZZU1_9STRA2.470e-753.70Ribosomal RNA-processing protein 8 n=1 Tax=Thraust... [more]
A0A1V9ZG95_9STRA2.800e-753.70Ribosomal RNA-processing protein 8 n=1 Tax=Achlya ... [more]
UPI000900C0EA7.570e-752.73ribosomal RNA-processing protein 8-like n=1 Tax=Ip... [more]
A0A024UTK9_9STRA7.650e-750.00Ribosomal RNA-processing protein 8 n=2 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042036Ribosomal RNA-processing protein 8, N-terminal domainGENE3D1.10.10.2150coord: 134..175
e-value: 2.5E-13
score: 51.9
IPR007823Ribosomal RNA processing protein 8PFAMPF05148Methyltransf_8coord: 130..175
e-value: 2.7E-10
score: 40.5
IPR007823Ribosomal RNA processing protein 8PANTHERPTHR12787UNCHARACTERIZEDcoord: 101..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig983contigD-mesarthrocarpus_Contig983:928..1521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig983.1.1mRNA_D-mesarthrocarpus_Contig983.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig983 262..1550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig983.1.1 ID=prot_D-mesarthrocarpus_Contig983.1.1|Name=mRNA_D-mesarthrocarpus_Contig983.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=198bp
MVVAKTDDKGSRLASSGKRRARESCPTEVVEGDIGLTRRKGGAGAKSKKV
KTPREEDETLNRGVSVDGKQQPHGRPRKRRRAGISGVVMDSGGCEGKRKG
DRDKSQGEGTAGGRDMARAQGSKGNKLSELQQRMRRKLEGGQFRMINERL
YTSPSSESLEKFQQEPHLFDVVSELGRFQSLVLFLLCAPNSQKYLPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042036RRP8_N
IPR007823RRP8