prot_D-mesarthrocarpus_Contig9660.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9660.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9660.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length158
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 4.680e-20
Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 0
Query:    3 VYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCGLRLSRLLCT-YETGFQVPSY--GDELPL-KFERAEFPLHHLKVLGAVAFVHVETHKTKLLQKG 157
            VY+   K E  + L ++++D+  P   RL+ LR+D+GG++TS   +D C    I  +FTAP +P Q G++ER  RTLM + RC +    +P+   G     L CT      ++P     +E P  +    +  L HL+V+G+ AFVH+ET+K+KL  + 
Sbjct:   81 VYLIRSKDEAINTLDRFIQDIVIPNGFRLERLRSDNGGEYTSEYYRDFCKTIGIVQEFTAPATPQQNGISERAGRTLMNIVRCLMHGGKLPEFLWG----ELCCTTVHITNRLPHVHLNNETPYYRMFGKQASLRHLRVIGSTAFVHLETYKSKLANRA 235          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 6.470e-17
Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 0
Query:   13 PSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCG-LRLSRLLCTYETGFQVPSYGDELPLKFERAEFPLHHLKVLGAVAFVHVETHKTKL 153
            PS L + LED++ P+  R+ VLR D G +FT+   +  C    IQ QF +P +PHQIG  ER  RT+M + RC L+   +P    G L  + +  +  T       G      F   +  L HL+V+GA AFVH ETH  KL
Sbjct:  908 PSVL-ELLEDISXPSCARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFG-TDAHLGHLRVVGARAFVHEETHTKKL 1047          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: A0A392M1E1_9FABA (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M1E1_9FABA)

HSP 1 Score: 85.9 bits (211), Expect = 1.550e-16
Identity = 50/155 (32.26%), Postives = 84/155 (54.19%), Query Frame = 0
Query:    3 VYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCGLRLSRLLCTYETGFQVPSYG--DELPLKFERAEFP-LHHLKVLGAVAFVHVETHKTKLL 154
            +Y  ++KSE  +   ++   +   + +++Q LRTD GG++TS    + C  H I+ Q TA Y+P Q GV+ER+ RT+M M RC L+   VPK F    ++ ++       + P++   D  P +   A  P + H K+ G +A+VH+  +  K L
Sbjct:  495 IYFLSEKSEALTVFQKFKAMIKNESKLKIQCLRTDRGGEYTSTAFNEFCDVHGIRRQLTAAYTPQQNGVSERKNRTIMNMVRCMLNDKNVPKNFWPEAVNWVVHILN---RCPTFAVKDITPEEAWSASKPSVSHFKIFGCIAYVHIPDNLRKKL 646          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: A0A182GP95_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GP95_AEDAL)

HSP 1 Score: 81.3 bits (199), Expect = 1.410e-15
Identity = 53/153 (34.64%), Postives = 77/153 (50.33%), Query Frame = 0
Query:    3 VYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCGLRLSRLLCTYETGFQVPSYGDELPLKFERAEFPLH-HLKVLGAVAFVHVETHKTKLL 154
            VY+   KSE    + +Y   +        +V+R+D GG++ S  L+   + H I HQ+TAPYSP Q GVAER+ R L+ M RC L+   + K F G  +S     Y       S     P +    + P + HL+V G+ AFVH+   K + L
Sbjct:  110 VYLLHAKSEAEDRIREYCAMMRNQFGRYPKVIRSDGGGEYASKSLQKFFADHGIVHQWTAPYSPQQNGVAERKNRYLVEMMRCLLADSKLEKVFWGEAIST--ANYLQNRLPSSSVKSTPYELWYRKKPAYDHLRVFGSEAFVHIPKEKRRKL 260          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: A0A392NUQ5_9FABA (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NUQ5_9FABA)

HSP 1 Score: 78.6 bits (192), Expect = 1.870e-15
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 0
Query:    2 KVYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAF 96
            ++Y  ++KSE  +   ++   +     +R+Q LRTD GG++TS    + C  H I+ Q TA YSP Q GV+ER+ RT+M M RC L    VPK+F
Sbjct:   27 QIYFLSEKSEALATFQKFKALVENETKLRIQCLRTDRGGEYTSTAFNEFCDIHGIRRQLTAVYSPQQNGVSERKNRTIMNMVRCMLKDKNVPKSF 121          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: A0A2K3KIW4_TRIPR (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KIW4_TRIPR)

HSP 1 Score: 79.7 bits (195), Expect = 5.030e-15
Identity = 53/154 (34.42%), Postives = 74/154 (48.05%), Query Frame = 0
Query:    3 VYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCGLRLSRLLCTYETGFQVP-SYGDELPLKFERAEFP-LHHLKVLGAVAFVHVETHKTKLL 154
            +YV  +KS        +   + K A   +Q LRTD GG++TS+   D CS+  I+ Q  A Y+P Q GV+ER+ RTL+ + R  +    VPK F    +     TY        S  D  P +      P +HH KV G VA VH+   + K L
Sbjct:   73 IYVLKEKSLALDCFKSFKALVEKEAKCAIQCLRTDRGGEYTSNAFSDFCSKEGIKRQLIAAYTPQQNGVSERKNRTLLNIVRSMIHARSVPKRFWPEAIK--WATYVMNRSPTLSVKDMTPEEAWSGRKPSVHHFKVFGCVAHVHIHDSQRKKL 224          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: A0A2Z6NB48_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NB48_TRISU)

HSP 1 Score: 80.5 bits (197), Expect = 1.200e-14
Identity = 51/154 (33.12%), Postives = 77/154 (50.00%), Query Frame = 0
Query:    3 VYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCGLRLSRLLCTYETGFQVPSYGDELPLK--FERAEFPLHHLKVLGAVAFVHVETHKTKLL 154
            +Y   +KSE      ++   + K +N  L  LRTD GG+FTS+   + CS   I+ Q TA Y+P Q GV+ER+ RT++ M R  +S   VPK F    ++    TY     +     +L  +  +   +  +HH +V G VA VH+     K L
Sbjct:  518 IYFLHEKSEALDCFKKFKTLVEKQSNCALLCLRTDRGGEFTSNTFNEFCSTQGIKRQLTAVYTPQQNGVSERKNRTILNMVRSMISARNVPKRFWPEAVN--WATYVMNRSLTHVVQDLTPEEAWSGVKPSVHHFRVFGCVAHVHIPDVNRKKL 669          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: H3H749_PHYRM (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H749_PHYRM)

HSP 1 Score: 79.3 bits (194), Expect = 1.200e-14
Identity = 53/155 (34.19%), Postives = 82/155 (52.90%), Query Frame = 0
Query:    3 VYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCGLRLSRLLCTYETGFQVPSYG---DELPLKFERAEFPL-HHLKVLGAVAFVHV-ETHKTK 152
            VY+   KSE  +   +++         R+Q LR+D+GG++TS  +   C+ H I  +FT PY+P   GVAER  R L+   RC L   G+PK + G  +  +  T+    + P+     D+ P +    + PL  +LKV G  A+VHV +T +TK
Sbjct:   25 VYLLRNKSEVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSGAMAKFCADHGIVQKFTPPYTPQLNGVAERMNRMLVECARCMLEHAGLPKTYWGEAV--MTATFLRN-RCPTRAISHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPKTKRTK 176          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: H3H9M1_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9M1_PHYRM)

HSP 1 Score: 80.1 bits (196), Expect = 1.400e-14
Identity = 52/152 (34.21%), Postives = 79/152 (51.97%), Query Frame = 0
Query:    3 VYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCGLRLSRLLCTYETGFQVPSYG---DELPLKFERAEFPL-HHLKVLGAVAFVHVETHK 150
            VY+   KSE  +   +++         R+Q LR+D+GG++TS  +   C+ H I  +FT PY+P   GVAER  RTL+   RC L   G+PK + G  +  +  T+    + P+     D+ P +    + PL  +LKV G  A+VHV   K
Sbjct:   47 VYLLRNKSEVAAKFAEFVAFAETQTGKRVQTLRSDNGGEYTSGAMAKFCADHGIVQKFTPPYTPQLNGVAERMNRTLVECARCMLEHAGLPKTYWGEAV--MTATFLRN-RCPTRAVSHDKSPHQVWTGKKPLLANLKVFGCHAYVHVPKAK 195          
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Match: A0A6H5KFB1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB1_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.410e-14
Identity = 50/165 (30.30%), Postives = 85/165 (51.52%), Query Frame = 0
Query:    3 VYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDVCSRHSIQHQFTAPYSPHQIGV-AEREWRTLMAMTRCFLSVPGVPKAFCG------LRLSRLLCTYETGFQVPSY---GDELPLKFERAEFPLHHLKVLGAVAFVHVETHKTKLLQKG 157
            VY+   K E  + L ++++D+  P   RL+ LR D+GG+++S   +D C    I  +FT P +P Q G+ +ER  RTLM + RC +    +P+   G      + ++  L       + P Y   G +  L+  R        +V+G+ A VH+ET+K+KL+ + 
Sbjct:   67 VYLIRSKDEAINTLDRFIQDIVIPNGFRLERLRNDNGGEYSSEYYRDFCKTIGIVQEFTVPATPQQNGIISERAGRTLMNIVRCLMHGGKLPEFLWGELCCTTVHITNRLPHVHLNNETPYYRMFGKQASLRHLRXXXXXXX-RVIGSTASVHLETYKSKLVNRA 230          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9660.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCZ9_9PHAE4.680e-2035.22Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5J842_9PHAE6.470e-1738.73Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A392M1E1_9FABA1.550e-1632.26Retrovirus-related pol polyprotein from transposon... [more]
A0A182GP95_AEDAL1.410e-1534.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A392NUQ5_9FABA1.870e-1541.05Retrovirus-related pol polyprotein from transposon... [more]
A0A2K3KIW4_TRIPR5.030e-1534.42Copia-type polyprotein (Fragment) n=1 Tax=Trifoliu... [more]
A0A2Z6NB48_TRISU1.200e-1433.12Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
H3H749_PHYRM1.200e-1434.19Integrase catalytic domain-containing protein n=2 ... [more]
H3H9M1_PHYRM1.400e-1434.21Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KFB1_9PHAE1.410e-1430.30Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..115
e-value: 6.7E-18
score: 66.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..130
score: 12.949573
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 6..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9660contigD-mesarthrocarpus_Contig9660:2166..2639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9660.1.1mRNA_D-mesarthrocarpus_Contig9660.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9660 2097..2702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9660.1.1 ID=prot_D-mesarthrocarpus_Contig9660.1.1|Name=mRNA_D-mesarthrocarpus_Contig9660.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=158bp
MKVYVQTKKSETPSYLCQYLEDLAKPANVRLQVLRTDSGGKFTSHILKDV
CSRHSIQHQFTAPYSPHQIGVAEREWRTLMAMTRCFLSVPGVPKAFCGLR
LSRLLCTYETGFQVPSYGDELPLKFERAEFPLHHLKVLGAVAFVHVETHK
TKLLQKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf