prot_D-mesarthrocarpus_Contig9621.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9621.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9621.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length83
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: UPI0019416C80 (DNA photolyase family protein n=1 Tax=Actinoplanes nipponensis TaxID=135950 RepID=UPI0019416C80)

HSP 1 Score: 67.4 bits (163), Expect = 3.000e-11
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    1 VVWFTACDLRTHDHEGLIAS-AGAARVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            +V FT  DLR HDH  L A+ A A +V+P+FV D  + +L++       FL+ ++  LRE LRRLG DLVIR+GD   E ++ A
Sbjct:    5 IVLFTR-DLRVHDHPALAAACANAEQVVPLFVLDPHLQRLSANRA---RFLHQSLADLRETLRRLGGDLVIRTGDPVAEAIKLA 84          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: A0A428WSS8_9ACTN (Deoxyribodipyrimidine photolyase n=1 Tax=Actinoplanes sp. ATCC 53533 TaxID=1288362 RepID=A0A428WSS8_9ACTN)

HSP 1 Score: 67.4 bits (163), Expect = 3.060e-11
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 VVWFTACDLRTHDHEGLIAS-AGAARVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            VV FT  DLR HD+  L A+ A A R++P+FV D  + +L++   L   FL+ ++  LRE LRRLG DLV+R+GD   E ++ A
Sbjct:    5 VVLFTR-DLRVHDNPALAAACANAERIVPLFVLDPLLGRLSANRAL---FLHQSLAELRETLRRLGGDLVVRTGDPVAEAIKVA 84          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: A0A0A6X1Z2_ACTUT (Deoxyribodipyrimidine photolyase n=1 Tax=Actinoplanes utahensis TaxID=1869 RepID=A0A0A6X1Z2_ACTUT)

HSP 1 Score: 65.5 bits (158), Expect = 1.430e-10
Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    8 DLRTHDHEGLIASAGAARVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            DLR HD+  L A+  A RV+P++V D    KLA  S   T FL+ ++  LR++LRR+G DLV+R GD   E V  A
Sbjct:   11 DLRVHDNPALTAACRADRVVPLYVLDP---KLAGLSPNRTRFLHQSLADLRDSLRRIGGDLVVRHGDPVTEAVRVA 83          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: UPI001942E64A (DNA photolyase family protein n=1 Tax=Actinoplanes couchii TaxID=403638 RepID=UPI001942E64A)

HSP 1 Score: 65.1 bits (157), Expect = 1.950e-10
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    8 DLRTHDHEGLIASAGAARVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            DLR HD+  L A+  A RV+P++V D     LA  S   T FL+  +  LRENLR LG DL++R+GD   E ++ A
Sbjct:   11 DLRLHDNPALAAACAADRVVPLYVLDPS---LADLSPNRTRFLHQCLADLRENLRGLGGDLIVRTGDPVAETIKVA 83          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: A0A1H2CRA8_9ACTN (Deoxyribodipyrimidine photo-lyase n=1 Tax=Actinoplanes derwentensis TaxID=113562 RepID=A0A1H2CRA8_9ACTN)

HSP 1 Score: 64.3 bits (155), Expect = 3.650e-10
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    8 DLRTHDHEGLIASAGAARVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            DLR HD+  L A+  A RV+P++V D    KLA  S   T FL+ ++  LR NLR +G DL++R+GD   E +  A
Sbjct:   11 DLRLHDNPALAAACAAERVVPLYVLDP---KLADLSPNRTRFLHQSLADLRANLREIGGDLIVRTGDPIAETITVA 83          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: UPI001ACE7A9A (DNA photolyase family protein n=1 Tax=Actinoplanes auranticolor TaxID=47988 RepID=UPI001ACE7A9A)

HSP 1 Score: 63.9 bits (154), Expect = 5.000e-10
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 VVWFTACDLRTHDHEGLIAS-AGAARVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            VV FT  DLR HD+  L A+ A A +V+P+FV D  + +L++   L   FL+ ++  LRE LR LG DLV+R+GD   EV++ A
Sbjct:    5 VVLFTR-DLRVHDNPALAAACANAEQVVPMFVLDPGLQRLSANRAL---FLHQSLRDLRETLRTLGGDLVVRTGDPVAEVIKVA 84          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: A0A6L3VVV7_9ACTN (Deoxyribodipyrimidine photo-lyase n=2 Tax=Actinomadura montaniterrae TaxID=1803903 RepID=A0A6L3VVV7_9ACTN)

HSP 1 Score: 62.8 bits (151), Expect = 1.270e-9
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    8 DLRTHDHEGLIASAGAARVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            DLR HD+  L A+  A R +P+FVFDD +      +     FL  A+  LRE+LR LG DLV+R GD   EV   A
Sbjct:   12 DLRVHDNPALAAACRAERTVPVFVFDDALLGGPFAAPNRVRFLLDALADLRESLRGLGGDLVVRRGDPVAEVARLA 87          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: A0A1C6TY61_9ACTN (Deoxyribodipyrimidine photo-lyase n=1 Tax=Micromonospora yangpuensis TaxID=683228 RepID=A0A1C6TY61_9ACTN)

HSP 1 Score: 62.8 bits (151), Expect = 1.270e-9
Identity = 40/84 (47.62%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    1 VVWFTACDLRTHDHEGLIASAGAA-RVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            +V FT  DLR HDH  L  S  A  RV+P FV D     LA  S   T FL  ++  LRENLR LG DLV+R GD   E +  A
Sbjct:    5 IVLFTR-DLRVHDHPALATSCAAFDRVVPTFVLDPA---LADRSPNRTRFLRQSLADLRENLRGLGGDLVLRQGDPVTETIRLA 84          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: A0A895XSW3_9ACTN (Deoxyribodipyrimidine photo-lyase n=1 Tax=Natronoglycomyces albus TaxID=2811108 RepID=A0A895XSW3_9ACTN)

HSP 1 Score: 61.6 bits (148), Expect = 3.190e-9
Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    1 VVWFTACDLRTHDHEGLIASAGAA-RVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGD 74
            VV FT  DLR HD+  L ++A AA RV+P++V D   N     S +  TFL H++  LRE+LR+LG+DL+IR GD
Sbjct:    5 VVLFTR-DLRVHDNPALASAARAAERVVPLYVADPADN----HSHIRETFLAHSIADLRESLRKLGADLLIRQGD 74          
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Match: A0A1I5XSV0_9ACTN (Deoxyribodipyrimidine photo-lyase n=4 Tax=Actinomadura madurae TaxID=1993 RepID=A0A1I5XSV0_9ACTN)

HSP 1 Score: 61.2 bits (147), Expect = 4.430e-9
Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    8 DLRTHDHEGLIASAGAARVLPIFVFDDQVNKLASESTLDTTFLYHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA 83
            DLR  D+  L A+  A RV+P+FVFDD++            FL  ++  LRE+LR LG DLV+R GD   EV   A
Sbjct:    6 DLRVRDNPALAAACRARRVVPLFVFDDRILGGRFAPPNRVRFLLESLADLRESLRELGGDLVLRRGDPVAEVARLA 81          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9621.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019416C803.000e-1145.24DNA photolyase family protein n=1 Tax=Actinoplanes... [more]
A0A428WSS8_9ACTN3.060e-1145.24Deoxyribodipyrimidine photolyase n=1 Tax=Actinopla... [more]
A0A0A6X1Z2_ACTUT1.430e-1046.05Deoxyribodipyrimidine photolyase n=1 Tax=Actinopla... [more]
UPI001942E64A1.950e-1044.74DNA photolyase family protein n=1 Tax=Actinoplanes... [more]
A0A1H2CRA8_9ACTN3.650e-1043.42Deoxyribodipyrimidine photo-lyase n=1 Tax=Actinopl... [more]
UPI001ACE7A9A5.000e-1045.24DNA photolyase family protein n=1 Tax=Actinoplanes... [more]
A0A6L3VVV7_9ACTN1.270e-944.74Deoxyribodipyrimidine photo-lyase n=2 Tax=Actinoma... [more]
A0A1C6TY61_9ACTN1.270e-947.62Deoxyribodipyrimidine photo-lyase n=1 Tax=Micromon... [more]
A0A895XSW3_9ACTN3.190e-949.33Deoxyribodipyrimidine photo-lyase n=1 Tax=Natronog... [more]
A0A1I5XSV0_9ACTN4.430e-943.42Deoxyribodipyrimidine photo-lyase n=4 Tax=Actinoma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 1..83
e-value: 6.4E-20
score: 73.5
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 1..81
e-value: 1.7E-16
score: 60.6
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 1..83
score: 19.586977
NoneNo IPR availablePANTHERPTHR47832DNA PHOTOLYASEcoord: 1..78
IPR036155Cryptochrome/photolyase, N-terminal domain superfamilySUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9621contigD-mesarthrocarpus_Contig9621:2724..3791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9621.1.1mRNA_D-mesarthrocarpus_Contig9621.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9621 2724..3791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9621.1.1 ID=prot_D-mesarthrocarpus_Contig9621.1.1|Name=mRNA_D-mesarthrocarpus_Contig9621.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=83bp
VVWFTACDLRTHDHEGLIASAGAARVLPIFVFDDQVNKLASESTLDTTFL
YHAVVSLRENLRRLGSDLVIRSGDAAVEVVEAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR006050DNA_photolyase_N
IPR036155Crypto/Photolyase_N_sf