prot_D-mesarthrocarpus_Contig9608.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9608.3.1
Unique Nameprot_D-mesarthrocarpus_Contig9608.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length42
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9608.3.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 7.230e-12
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0
Query:    1 RPFRITHVNSAWTSLCGYELEECKGKNLSILQ 32
            RPFRITHVN AWT LCG+EL+ECKGKNLSILQ
Sbjct:  302 RPFRITHVNGAWTQLCGFELDECKGKNLSILQ 333          
BLAST of mRNA_D-mesarthrocarpus_Contig9608.3.1 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.910e-11
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 RPFRITHVNSAWTSLCGYELEECKGKNLSILQVTTTCVT 39
            RPFRITHVN AWT LCG+ELEEC+GK+LSILQ   T +T
Sbjct:  341 RPFRITHVNKAWTELCGFELEECEGKSLSILQGPETDMT 379          
BLAST of mRNA_D-mesarthrocarpus_Contig9608.3.1 vs. uniprot
Match: A0A7S2AW77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AW77_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 9.110e-8
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
Query:    2 PFRITHVNSAWTSLCGYELEECKGKNLSILQ 32
            PFRI HVNSAWT LCGY  EE  GK+L+ILQ
Sbjct:   44 PFRIVHVNSAWTRLCGYTQEESLGKSLNILQ 74          
BLAST of mRNA_D-mesarthrocarpus_Contig9608.3.1 vs. uniprot
Match: A0A7S2DLD9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLD9_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.280e-7
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0
Query:    1 RPFRITHVNSAWTSLCGYELEECKGKNLSILQ 32
            RPFRITHVN+AWT LCG+  EE  GK LS++Q
Sbjct:  371 RPFRITHVNAAWTELCGFTAEEAYGKTLSLIQ 402          
BLAST of mRNA_D-mesarthrocarpus_Contig9608.3.1 vs. uniprot
Match: A0A7S2AWG7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWG7_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.040e-6
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = 0
Query:    2 PFRITHVNSAWTSLCGYELEECKGKNLSILQ 32
            PFRI HVNSAWT LCGY  EE  G++L+ILQ
Sbjct:  275 PFRIVHVNSAWTRLCGYTQEESLGRSLNILQ 305          
BLAST of mRNA_D-mesarthrocarpus_Contig9608.3.1 vs. uniprot
Match: A0A7S1FRJ4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRJ4_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.740e-6
Identity = 19/31 (61.29%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    2 PFRITHVNSAWTSLCGYELEECKGKNLSILQ 32
            PFRI HVN+AWT LCGY L+E +G+ L+++Q
Sbjct:  212 PFRIQHVNAAWTDLCGYTLDEVRGETLAVIQ 242          
BLAST of mRNA_D-mesarthrocarpus_Contig9608.3.1 vs. uniprot
Match: A0A7S2FIQ7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FIQ7_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 3.820e-6
Identity = 22/32 (68.75%), Postives = 24/32 (75.00%), Query Frame = 0
Query:    1 RPFRITHVNSAWTSLCGYELEECKGKNLSILQ 32
            RPFRITHVNSAWT LCG+  EE  G+ L  LQ
Sbjct:  371 RPFRITHVNSAWTDLCGFTQEEACGQTLRCLQ 402          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9608.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A836C6X3_9STRA7.230e-1287.50BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5K0R4_9PHAE1.910e-1174.36PAS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2AW77_9STRA9.110e-874.19Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2DLD9_9STRA2.280e-768.75Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2AWG7_9STRA2.040e-670.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1FRJ4_9STRA2.740e-661.29Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2FIQ7_9STRA3.820e-668.75Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013767PAS foldPFAMPF00989PAScoord: 4..35
e-value: 6.4E-5
score: 22.9
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 1..40
e-value: 9.6E-7
score: 30.7
IPR000014PAS domainCDDcd00130PAScoord: 3..31
e-value: 8.13978E-4
score: 31.4496
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 3..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9608contigD-mesarthrocarpus_Contig9608:4589..4714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9608.3.1mRNA_D-mesarthrocarpus_Contig9608.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9608 4589..4714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9608.3.1 ID=prot_D-mesarthrocarpus_Contig9608.3.1|Name=mRNA_D-mesarthrocarpus_Contig9608.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=42bp
RPFRITHVNSAWTSLCGYELEECKGKNLSILQVTTTCVTSY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013767PAS_fold
IPR000014PAS
IPR035965PAS-like_dom_sf