prot_D-mesarthrocarpus_Contig9394.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9394.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9394.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length94
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9394.1.1 vs. uniprot
Match: A0A6H5LN52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN52_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 7.670e-24
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 0 
Query:    3 LQVLPVGAQMVVLGEVAEDDTGGSRVAASNVVLQKATPRSILDIKTTSILRPFTVSTKTEQELIQEIERSARYYFWGAMLSIASGLVLIVAG 94
            +QVL VG++++VLGEV ED  G    A  +VVL+KA P SILD+KTTSI RPF  S K+EQ L+QEIERS R YFW A+ S+A GL     G
Sbjct:    1 MQVLAVGSRLIVLGEVGEDPEG----AEGDVVLRKAAPSSILDLKTTSISRPFVASIKSEQGLLQEIERSGRIYFWLALPSVAVGLAFAYVG 88
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BLAST of mRNA_D-mesarthrocarpus_Contig9394.1.1 vs. uniprot
Match: D7FLV1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV1_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.250e-21
Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 0 
Query:    1 TSLQVLPVGAQMVVLGEVAEDDTGGSRVAASNVVLQKATPRSILDIKTTSILRPFTVSTKTEQELIQEIERSARYYFWGAMLSIASGLVLIVAG 94
            T+ +VL VG++++VLGEV ED  G    A  +VVL+KA P SILD+KTTSI RPF  S K+EQ L+QEIERS R YFW A+ S+A GL     G
Sbjct:  215 TTEEVLAVGSRLIVLGEVGEDPEG----AEGDVVLRKAAPSSILDLKTTSISRPFVASIKSEQGLLQEIERSGRIYFWLALPSVAVGLAFAYVG 304
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9394.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LN52_9PHAE7.670e-2457.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLV1_ECTSI1.250e-2156.38RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022170E3 Ubiquitin ligase MUL1-likePFAMPF12483GIDEcoord: 45..89
e-value: 2.8E-7
score: 30.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9394contigD-mesarthrocarpus_Contig9394:4075..4940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9394.1.1mRNA_D-mesarthrocarpus_Contig9394.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9394 4075..4940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9394.1.1 ID=prot_D-mesarthrocarpus_Contig9394.1.1|Name=mRNA_D-mesarthrocarpus_Contig9394.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=94bp
TSLQVLPVGAQMVVLGEVAEDDTGGSRVAASNVVLQKATPRSILDIKTTS
ILRPFTVSTKTEQELIQEIERSARYYFWGAMLSIASGLVLIVAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022170MUL1-like