prot_D-mesarthrocarpus_Contig9390.5.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9390.5.1
Unique Nameprot_D-mesarthrocarpus_Contig9390.5.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length133
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A518N4J1_9GAMM (Multifunctional fusion protein n=2 Tax=Luteimonas TaxID=83614 RepID=A0A518N4J1_9GAMM)

HSP 1 Score: 184 bits (468), Expect = 7.210e-58
Identity = 99/136 (72.79%), Postives = 109/136 (80.15%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQL--NTI--MRDKIKLVSSAGTGHFYTTDKNKRNMPDKMEIKKFDPVVRKHVIYKESKIK 132
            MSRVC VTGK   TGNNVSHANNKTRRRF PNLH  RFWV SE R+VKLRVST  MR IDK GID VL ++R+R  +   NT+   RDKI+L+SSA TGHFYTTDKNK+N P KMEIKK+DPVVRKHVIYKE KIK
Sbjct:    1 MSRVCQVTGKGVQTGNNVSHANNKTRRRFLPNLHERRFWVASENRWVKLRVSTAAMRTIDKNGIDVVLAELRARAKRSEENTMPSKRDKIRLISSANTGHFYTTDKNKKNTPGKMEIKKYDPVVRKHVIYKEGKIK 136          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A8J5E2A8_9CHEL (39S ribosomal protein L28, mitochondrial n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5E2A8_9CHEL)

HSP 1 Score: 167 bits (424), Expect = 1.980e-51
Identity = 88/132 (66.67%), Postives = 101/132 (76.52%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQLNTIMRDKIKLVSSAGTGHFYTTDKNKRNMPDKMEIKKFDPVVRKHVIYKESKIK 132
            M++VC VTGK+PV GNNVSHA+NKTRRRF PNLH+HRFWVESE RFVKLR++ KGMRIIDK G                 IMRDKIKLVS+AGTG+FYTT KNKR M +K+  K +DP VRKHV +KESKIK
Sbjct:    1 MAKVCQVTGKRPVVGNNVSHAHNKTRRRFLPNLHTHRFWVESENRFVKLRLTAKGMRIIDKKG---------------ENIMRDKIKLVSTAGTGYFYTTTKNKRTMTEKLVKKMYDPKVRKHVDFKESKIK 117          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A7R8VZT6_9CRUS (39S ribosomal protein L28, mitochondrial n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8VZT6_9CRUS)

HSP 1 Score: 163 bits (413), Expect = 7.750e-50
Identity = 87/132 (65.91%), Postives = 95/132 (71.97%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQLNTIMRDKIKLVSSAGTGHFYTTDKNKRNMPDKMEIKKFDPVVRKHVIYKESKIK 132
            MSR+C VTGK+P+ GNNVSHA N TRRRF PNLH+HRFWVE E R+V LRVS+KGMRIIDK GID+VL DIR R                     HFYTT KNKR M  KMEIKKFDPVVRKHV+YKE KIK
Sbjct:    1 MSRICQVTGKRPMYGNNVSHAKNTTRRRFLPNLHTHRFWVEGENRWVSLRVSSKGMRIIDKNGIDAVLADIRKR---------------------HFYTTTKNKRTMQGKMEIKKFDPVVRKHVMYKEGKIK 111          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A356SCR2_9GAMM (50S ribosomal protein L28 n=10 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A356SCR2_9GAMM)

HSP 1 Score: 144 bits (363), Expect = 1.170e-42
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQL 78
            MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLH+HRFWVESEKRFVKLRVSTKGMR IDKLGID+VL DIR +GVQ+
Sbjct:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHTHRFWVESEKRFVKLRVSTKGMRTIDKLGIDTVLADIRRKGVQV 78          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A2A5WE51_9GAMM (50S ribosomal protein L28 n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2A5WE51_9GAMM)

HSP 1 Score: 143 bits (361), Expect = 2.370e-42
Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQL 78
            MSRVCMVTGKKPVTGNNVSHANN+TRRRFSPN+HSHRFWVESEKRFVKLR+STKGMRIIDKLGID+VL DIR++G Q+
Sbjct:    1 MSRVCMVTGKKPVTGNNVSHANNRTRRRFSPNIHSHRFWVESEKRFVKLRLSTKGMRIIDKLGIDAVLADIRAKGAQV 78          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A699GI89_TANCI (50S ribosomal protein L28, chloroplastic n=2 Tax=cellular organisms TaxID=131567 RepID=A0A699GI89_TANCI)

HSP 1 Score: 155 bits (393), Expect = 2.110e-41
Identity = 82/132 (62.12%), Postives = 96/132 (72.73%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQLNTIMRDKIKLVSSAGTGHFYTTDKNKRNMPDKMEIKKFDPVVRKHVIYKESKIK 132
            M+RVC VTGKKP+ GNNVSHANNKT+RRF PNL + R +VESE R+V LR+S  G+R+IDK+GID+VLTD+R+R                   TGHFYTT KNKR MP KMEI KFDP  RKHV YKE+KIK
Sbjct: 1735 MARVCQVTGKKPMVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKVGIDAVLTDMRAR-------------------TGHFYTTTKNKRTMPAKMEIMKFDPKARKHVAYKETKIK 1847          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A2E7DPD4_9GAMM (50S ribosomal protein L28 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7DPD4_9GAMM)

HSP 1 Score: 140 bits (354), Expect = 2.760e-41
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQ 77
            MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVS KGMRIIDKLGID+VL  +R++G+Q
Sbjct:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSAKGMRIIDKLGIDAVLVKMRAKGLQ 77          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A2E9ZJY3_9GAMM (50S ribosomal protein L28 n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E9ZJY3_9GAMM)

HSP 1 Score: 140 bits (352), Expect = 5.560e-41
Identity = 67/78 (85.90%), Postives = 76/78 (97.44%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQL 78
            MSRVCMVTGK+PV+GNNVSHANNKT+RRFSPN+H+HRFWVESEKRFVKLR+STKGMRIIDKLGID+VL DIRS GV++
Sbjct:    1 MSRVCMVTGKRPVSGNNVSHANNKTKRRFSPNIHTHRFWVESEKRFVKLRLSTKGMRIIDKLGIDTVLADIRSNGVRV 78          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A2A5B0Y5_9GAMM (50S ribosomal protein L28 n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5B0Y5_9GAMM)

HSP 1 Score: 139 bits (350), Expect = 1.120e-40
Identity = 65/78 (83.33%), Postives = 76/78 (97.44%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQL 78
            MSRVCMVTGKKP+TGNNVSHANN+T+RRFSPN+HSHRFWVESEKRFVKLRVSTKGMRIIDKLGID+VL ++R+ G+++
Sbjct:    1 MSRVCMVTGKKPITGNNVSHANNRTKRRFSPNIHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDTVLANVRNSGIRV 78          
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Match: A0A0R2SBN2_9GAMM (50S ribosomal protein L28 n=6 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0R2SBN2_9GAMM)

HSP 1 Score: 138 bits (348), Expect = 2.260e-40
Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 0
Query:    1 MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLRVSTKGMRIIDKLGIDSVLTDIRSRGVQL 78
            MSRVCMVTGKKP+TGNNVSHANN+TRRRFSPNL SHRFWVESEKRF+KLR+STKGMRIIDK+GIDSVL DIR  G ++
Sbjct:    1 MSRVCMVTGKKPITGNNVSHANNRTRRRFSPNLQSHRFWVESEKRFIKLRISTKGMRIIDKVGIDSVLADIRKNGAKV 78          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9390.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518N4J1_9GAMM7.210e-5872.79Multifunctional fusion protein n=2 Tax=Luteimonas ... [more]
A0A8J5E2A8_9CHEL1.980e-5166.6739S ribosomal protein L28, mitochondrial n=1 Tax=N... [more]
A0A7R8VZT6_9CRUS7.750e-5065.9139S ribosomal protein L28, mitochondrial n=1 Tax=C... [more]
A0A356SCR2_9GAMM1.170e-4291.0350S ribosomal protein L28 n=10 Tax=Gammaproteobact... [more]
A0A2A5WE51_9GAMM2.370e-4288.4650S ribosomal protein L28 n=2 Tax=Gammaproteobacte... [more]
A0A699GI89_TANCI2.110e-4162.1250S ribosomal protein L28, chloroplastic n=2 Tax=c... [more]
A0A2E7DPD4_9GAMM2.760e-4189.6150S ribosomal protein L28 n=1 Tax=Gammaproteobacte... [more]
A0A2E9ZJY3_9GAMM5.560e-4185.9050S ribosomal protein L28 n=3 Tax=Gammaproteobacte... [more]
A0A2A5B0Y5_9GAMM1.120e-4083.3350S ribosomal protein L28 n=1 Tax=SAR86 cluster ba... [more]
A0A0R2SBN2_9GAMM2.260e-4084.6250S ribosomal protein L28 n=6 Tax=Gammaproteobacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001383Ribosomal protein L28TIGRFAMTIGR00009TIGR00009coord: 1..58
e-value: 1.6E-27
score: 93.7
IPR001383Ribosomal protein L28HAMAPMF_00373Ribosomal_L28coord: 1..67
score: 21.292097
IPR001705Ribosomal protein L33PFAMPF00471Ribosomal_L33coord: 85..130
e-value: 2.7E-17
score: 62.9
IPR001705Ribosomal protein L33TIGRFAMTIGR01023TIGR01023coord: 83..132
e-value: 2.6E-24
score: 83.3
IPR001705Ribosomal protein L33HAMAPMF_00294Ribosomal_L33coord: 82..130
score: 15.550785
IPR026569Ribosomal protein L28/L24PFAMPF00830Ribosomal_L28coord: 3..61
e-value: 1.5E-26
score: 92.3
IPR026569Ribosomal protein L28/L24PANTHERPTHR1352839S RIBOSOMAL PROTEIN L28, MITOCHONDRIALcoord: 1..80
IPR037147Ribosomal protein L28/L24 superfamilyGENE3D2.30.170.40Ribosomal protein L28/L24coord: 2..78
e-value: 1.2E-33
score: 116.9
IPR038584Ribosomal protein L33 superfamilyGENE3D2.20.28.120Ribosomal protein L33coord: 81..132
e-value: 3.4E-24
score: 86.8
NoneNo IPR availablePANTHERPTHR13528:SF1050S RIBOSOMAL PROTEIN L28coord: 1..80
IPR018264Ribosomal protein L33, conserved sitePROSITEPS00582RIBOSOMAL_L33coord: 98..117
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 2..76
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 82..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9390contigD-mesarthrocarpus_Contig9390:3176..3598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9390.5.1mRNA_D-mesarthrocarpus_Contig9390.5.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9390 3176..3598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9390.5.1 ID=prot_D-mesarthrocarpus_Contig9390.5.1|Name=mRNA_D-mesarthrocarpus_Contig9390.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=133bp
MSRVCMVTGKKPVTGNNVSHANNKTRRRFSPNLHSHRFWVESEKRFVKLR
VSTKGMRIIDKLGIDSVLTDIRSRGVQLNTIMRDKIKLVSSAGTGHFYTT
DKNKRNMPDKMEIKKFDPVVRKHVIYKESKIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001383Ribosomal_L28
IPR001705Ribosomal_L33
IPR026569Ribo_L28/L24
IPR037147Ribo_L28/L24_sf
IPR038584L33_sf
IPR018264Ribosomal_L33_CS
IPR034704L28p-like
IPR011332Ribosomal_zn-bd