prot_D-mesarthrocarpus_Contig9370.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9370.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9370.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length187
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A2D7FJZ0_9PROT (NifU family protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJZ0_9PROT)

HSP 1 Score: 288 bits (736), Expect = 4.470e-97
Identity = 149/185 (80.54%), Postives = 160/185 (86.49%), Query Frame = 0
Query:    2 INVVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDDEKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAIE 186
            +NV+TEATPNPATLKFIPGCPVME GT NFAS DMA + PLA RLF IDGVKGVFFGADFVSVAKSEA DW+ LE +V A IEAHF SGDP  LV E P  G  +DEKDD VV QIKELL+TRIRPSVALDGGDIVYRGFERGVVYLSLQGAC+GCPSS+ATLKMGVENLLKHYVP VLRV+ I+
Sbjct:    1 MNVITEATPNPATLKFIPGCPVMEEGTVNFASADMAARVPLARRLFAIDGVKGVFFGADFVSVAKSEAVDWRALEQSVFAVIEAHFESGDPIGLVHEGP--GADEDEKDDAVVRQIKELLETRIRPSVALDGGDIVYRGFERGVVYLSLQGACIGCPSSSATLKMGVENLLKHYVPAVLRVEPID 183          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A520NVS9_9PROT (NifU family protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NVS9_9PROT)

HSP 1 Score: 235 bits (600), Expect = 1.510e-76
Identity = 120/173 (69.36%), Postives = 139/173 (80.35%), Query Frame = 0
Query:   15 LKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDD-EKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAIE 186
            +KF+PGCPVM  GTAN+ASP  A  APL  RLF IDGV GVF GADF+SVAK  AADW  LEP V   +   F SG+ A++   E + G  DD ++DDE V +IKELLDTR+RPSVA+DGGDIVYRGFERGVVYLSLQGAC+GCPSS+ATLKMGVENLLKHYVPDVLRV++I+
Sbjct:    1 MKFLPGCPVMTGGTANYASPGEAGNAPLVQRLFEIDGVAGVFLGADFISVAKRTAADWHSLEPVVAEAVSEFFLSGETAVI--SEGNIGDADDGDEDDETVTRIKELLDTRVRPSVAMDGGDIVYRGFERGVVYLSLQGACIGCPSSSATLKMGVENLLKHYVPDVLRVKSID 171          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A2D8PRX2_9PROT (NifU family protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PRX2_9PROT)

HSP 1 Score: 233 bits (593), Expect = 2.620e-75
Identity = 117/186 (62.90%), Postives = 145/186 (77.96%), Query Frame = 0
Query:    1 MINVVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDDEKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAIE 186
            M+NV  E+TPNPAT+KF+PG PV+E GTANFASPD AE + LA RLFGI GV+GVFFG+DF+SVAKSE ADW  LE AV + I  HF +G P +  A+E +    D + +DEVV +I+EL+D RIRPSVALDGGDI++R F+ G+V +SL+GAC GCPSS  TLKMGVENLL+HYVP V  V+A +
Sbjct:    1 MVNVKVESTPNPATMKFLPGGPVLEEGTANFASPDAAESSTLARRLFGIAGVRGVFFGSDFISVAKSEGADWLDLETAVASAISTHFEAGLPVVGAAKEEET---DTDIEDEVVARIRELIDNRIRPSVALDGGDIIFRSFDDGIVRVSLRGACAGCPSSAGTLKMGVENLLRHYVPAVQAVEAAD 183          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: K2KLQ8_9PROT (NifU-like protein domain protein n=3 Tax=Oceanibaculum TaxID=659693 RepID=K2KLQ8_9PROT)

HSP 1 Score: 231 bits (590), Expect = 7.500e-75
Identity = 115/181 (63.54%), Postives = 141/181 (77.90%), Query Frame = 0
Query:    4 VVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDDEKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQA 184
            + TE+TPNPATLKF+PG  VME GTA+FA  + A+++PLA RLF +DGV GVFFGADFVSVAK +  +W VL+PAV   I  HF +GDP +L  +  DA    +  D E+V  IKELLDTR+RP+VA DGGDIV++GFE GVVYL +QGAC GCPSSTATLKMG+ENLLKHY+P+V  V+A
Sbjct:    3 IQTESTPNPATLKFLPGRSVMEEGTADFADAEAAKRSPLAKRLFAVDGVTGVFFGADFVSVAKRDDKEWYVLKPAVLGAIMEHFTAGDPLLLADDSADAAPAGE--DSEIVQTIKELLDTRVRPAVAQDGGDIVFKGFEDGVVYLHMQGACAGCPSSTATLKMGIENLLKHYIPEVAEVRA 181          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A0A0EJB9_9RHOB (Iron transporter n=5 Tax=Rhodobacterales TaxID=204455 RepID=A0A0A0EJB9_9RHOB)

HSP 1 Score: 231 bits (589), Expect = 1.220e-74
Identity = 110/183 (60.11%), Postives = 142/183 (77.60%), Query Frame = 0
Query:    4 VVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDDEKDD-EVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAI 185
            + TE+TPNPATLKF+PG  V+E GTA+F + D AEK+PLA RLF +DGV GVFFG DFV+V K++A +W  ++PA+   I  HF SG P + V ++P +G  +   +D E+VGQIKELLDTR+RP+VA DGGDI + GFERGVVYL +QGAC GCPSST TLKMG+ENLL+HY+P+V  V+ +
Sbjct:    3 IQTESTPNPATLKFLPGQSVLEAGTADFPTADTAEKSPLASRLFAVDGVTGVFFGTDFVTVTKADAVEWDHIKPALLGAIMEHFQSGQPVMAVGDQPQSGHAEHTGEDGEIVGQIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVTEVRPV 185          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A521MAH4_9HYPH (NifU family protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521MAH4_9HYPH)

HSP 1 Score: 231 bits (588), Expect = 1.460e-74
Identity = 116/183 (63.39%), Postives = 146/183 (79.78%), Query Frame = 0
Query:    4 VVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDDEKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAIE 186
            + TE TPNP+TLKF+PG  VME GT +FAS D A+ +PLA RLF I+GV+ VFFG+DFV+V K+ + DWQ+L+P++  GI  H+ SGDP  +VAE  DAG    E DDE+V QIKELLDTR+RP+VA DGGDIV++ F+ GVVYL +QG+C GCPSSTATLKMG+ENLLKHYVP+V+ VQA +
Sbjct:    3 IQTEQTPNPSTLKFLPGRVVMEKGTMDFASADTAQPSPLAKRLFAIEGVERVFFGSDFVTVTKTTSQDWQILKPSILGGIMEHYTSGDP--VVAESADAGAAAAE-DDEIVAQIKELLDTRVRPAVAQDGGDIVFQDFKDGVVYLHMQGSCSGCPSSTATLKMGIENLLKHYVPEVVEVQAAQ 182          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A545TRQ4_9PROT (NifU family protein n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TRQ4_9PROT)

HSP 1 Score: 230 bits (586), Expect = 3.250e-74
Identity = 108/182 (59.34%), Postives = 140/182 (76.92%), Query Frame = 0
Query:    4 VVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDDEKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAI 185
            + TE TPNPATLKF+PG  V+E+GTANF     A ++PLA RLF ++G+ GVFFG+DF+++ K E  +W +L+PA+   I  HF +G P +L  E PD    +DE+ DEVV QIKELLDTR+RP+VA DGGDIV+ GF+ GVVYL +QGAC GCPSSTATLKMG+EN+L+HY+P+V  V+AI
Sbjct:    3 IQTEQTPNPATLKFLPGRAVVESGTANFPEASSASRSPLAQRLFDVEGITGVFFGSDFITITKGEDREWYLLKPAILGVIMEHFTAGRPVLLPDEAPDLAAAEDEEPDEVVAQIKELLDTRVRPAVAQDGGDIVFHGFDGGVVYLHMQGACAGCPSSTATLKMGIENMLRHYIPEVQEVRAI 184          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A4R2NWI3_RHOAD (Fe-S cluster biogenesis protein NfuA n=1 Tax=Rhodovulum adriaticum TaxID=35804 RepID=A0A4R2NWI3_RHOAD)

HSP 1 Score: 229 bits (584), Expect = 6.770e-74
Identity = 108/182 (59.34%), Postives = 138/182 (75.82%), Query Frame = 0
Query:    4 VVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDDEKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAI 185
            + TE+TPNPATLKF+PG  V+E GTA+F +P+ AEK+PLA R+F +DGV+GVFFG DFV+V K++  +W  ++PA+   I  HF SGDPAI      D     D  D E+V QIK+LLDTR+RP+VA DGGDI + GFERGVVYL +QGAC GCPSST TLKMG+ENLL+HY+P+V  V+ +
Sbjct:    3 IQTESTPNPATLKFLPGQAVLEVGTADFPAPEAAEKSPLASRIFAVDGVRGVFFGTDFVTVTKADTVEWDHIKPAILGAIMEHFQSGDPAIRGEGGGDGHAAHDGPDSEIVNQIKQLLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVTEVRPV 184          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A849GVR8_9RHOB (NifU family protein n=3 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A849GVR8_9RHOB)

HSP 1 Score: 229 bits (583), Expect = 9.610e-74
Identity = 113/185 (61.08%), Postives = 144/185 (77.84%), Query Frame = 0
Query:    4 VVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGDDE---KDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAI 185
            + TE+TPNPATLKF+PG  V++TGTA+F S D A+K+PLA RLFGIDGV GVFFG DFV+V K++  +W V++P++  GI  HF SG P   V E  +A  G  E   +D E+V QIKELLDTR+RP+VA DGGDIV+ GFERG+VYL +QGAC GCPSST TLKMG+ENLL+HY+P+V+ V+ +
Sbjct:    3 IQTESTPNPATLKFLPGQTVLDTGTADFPSADTADKSPLATRLFGIDGVTGVFFGTDFVTVTKADQTEWDVIKPSILGGIMEHFQSGQP---VMEGNNAASGHAEHSGEDAEIVSQIKELLDTRVRPAVAQDGGDIVFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVVEVRPV 184          
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Match: A0A1Y5FQ84_9PROT (NifU family protein n=1 Tax=Rhodospirillales bacterium 47_12_T64 TaxID=1856302 RepID=A0A1Y5FQ84_9PROT)

HSP 1 Score: 229 bits (583), Expect = 9.940e-74
Identity = 108/183 (59.02%), Postives = 142/183 (77.60%), Query Frame = 0
Query:    4 VVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGIDGVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEPDAGVGD--DEKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSLQGACVGCPSSTATLKMGVENLLKHYVPDVLRVQA 184
            + TE TPNPATLKF+PGCPV+++GTA F + + A  +PLA RLF ++G+ GVFFGADF+++ KSE  +W +L+P++   I  HF +G P ++   E  +G  D  DE DDE+V QIKELLDTR+RP+VA DGGDIV+ GFE GVVYL +QGAC GCPSSTATLKMG+EN+L+HY+P+V  V+A
Sbjct:    3 IQTEQTPNPATLKFLPGCPVLDSGTAFFEAREAASNSPLAQRLFDVEGITGVFFGADFITITKSEDKEWYILKPSILGTIMEHFTAGRPVMVDGAENISGHADAADEDDDEIVSQIKELLDTRVRPAVAQDGGDIVFHGFENGVVYLHMQGACAGCPSSTATLKMGIENMLRHYIPEVTEVRA 185          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9370.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7FJZ0_9PROT4.470e-9780.54NifU family protein n=1 Tax=Rhodospirillaceae bact... [more]
A0A520NVS9_9PROT1.510e-7669.36NifU family protein n=2 Tax=Rhodospirillaceae bact... [more]
A0A2D8PRX2_9PROT2.620e-7562.90NifU family protein n=1 Tax=Rhodospirillaceae bact... [more]
K2KLQ8_9PROT7.500e-7563.54NifU-like protein domain protein n=3 Tax=Oceanibac... [more]
A0A0A0EJB9_9RHOB1.220e-7460.11Iron transporter n=5 Tax=Rhodobacterales TaxID=204... [more]
A0A521MAH4_9HYPH1.460e-7463.39NifU family protein n=1 Tax=Reyranella sp. TaxID=1... [more]
A0A545TRQ4_9PROT3.250e-7459.34NifU family protein n=1 Tax=Denitrobaculum tricleo... [more]
A0A4R2NWI3_RHOAD6.770e-7459.34Fe-S cluster biogenesis protein NfuA n=1 Tax=Rhodo... [more]
A0A849GVR8_9RHOB9.610e-7461.08NifU family protein n=3 Tax=Rhodobacteraceae TaxID... [more]
A0A1Y5FQ84_9PROT9.940e-7459.02NifU family protein n=1 Tax=Rhodospirillales bacte... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014824Scaffold protein Nfu/NifU, N-terminalSMARTSM00932Nfu_N_3acoord: 4..90
e-value: 6.2E-42
score: 155.3
IPR014824Scaffold protein Nfu/NifU, N-terminalPFAMPF08712Nfu_Ncoord: 5..90
e-value: 5.1E-28
score: 97.0
IPR036498Scaffold protein Nfu/NifU, N-terminal domain superfamilyGENE3D3.30.1370.70coord: 1..95
e-value: 6.1E-30
score: 105.0
IPR036498Scaffold protein Nfu/NifU, N-terminal domain superfamilySUPERFAMILY110836Hypothetical protein SAV1430coord: 2..91
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 117..183
e-value: 1.6E-26
score: 92.2
IPR035433NFU1-likePIRSFPIRSF036773HIRIP5coord: 1..186
e-value: 7.8E-70
score: 232.6
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 111..185
e-value: 1.1E-29
score: 104.3
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 107..185
NoneNo IPR availablePANTHERPTHR11178:SF46NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG (S. CEREVISIAE)coord: 4..184
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 4..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9370contigD-mesarthrocarpus_Contig9370:474..1034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9370.1.1mRNA_D-mesarthrocarpus_Contig9370.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9370 474..1034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9370.1.1 ID=prot_D-mesarthrocarpus_Contig9370.1.1|Name=mRNA_D-mesarthrocarpus_Contig9370.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=187bp
MINVVTEATPNPATLKFIPGCPVMETGTANFASPDMAEKAPLALRLFGID
GVKGVFFGADFVSVAKSEAADWQVLEPAVTAGIEAHFASGDPAILVAEEP
DAGVGDDEKDDEVVGQIKELLDTRIRPSVALDGGDIVYRGFERGVVYLSL
QGACVGCPSSTATLKMGVENLLKHYVPDVLRVQAIE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014824Nfu/NifU_N
IPR036498Nfu/NifU_N_sf
IPR001075NIF_FeS_clus_asmbl_NifU_C
IPR035433NFU1-like
IPR034904FSCA_dom_sf