prot_D-mesarthrocarpus_Contig9347.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9347.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9347.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length200
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9347.1.1 vs. uniprot
Match: A0A7S3JPA4_9SPIT (Hypothetical protein n=2 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JPA4_9SPIT)

HSP 1 Score: 59.7 bits (143), Expect = 9.660e-8
Identity = 25/68 (36.76%), Postives = 35/68 (51.47%), Query Frame = 0 
Query:  126 REPQSTTCPHCLHTGVTVTETDPCSAMPVLCAFFCCICGMWPCSIFPFCFPEIRDTVHRCAHCNEVVG 193
            REP    CPHC  TGVT         +    +  CC+ GM PC++ P+C  +++D +H C  C  VV 
Sbjct:  101 REPVIVKCPHCNQTGVTTVRKQN-GMLVYASSVICCLVGMGPCALVPWCIGDLKDCIHECHFCGNVVA 167
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9347.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3JPA4_9SPIT9.660e-836.76Hypothetical protein n=2 Tax=Euplotes harpa TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006629LPS-induced tumour necrosis factor alpha factorSMARTSM00714litafcoord: 128..197
e-value: 4.3E-7
score: 39.6
IPR006629LPS-induced tumour necrosis factor alpha factorPFAMPF10601zf-LITAF-likecoord: 126..195
e-value: 5.6E-14
score: 52.1
IPR006629LPS-induced tumour necrosis factor alpha factorPROSITEPS51837LITAFcoord: 112..197
score: 14.898289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..39
NoneNo IPR availablePANTHERPTHR23292:SF6FI16602P1-RELATEDcoord: 27..197
IPR037519LITAF domain containing proteinPANTHERPTHR23292LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTORcoord: 27..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9347contigD-mesarthrocarpus_Contig9347:697..2188 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9347.1.1mRNA_D-mesarthrocarpus_Contig9347.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9347 9..2473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9347.1.1 ID=prot_D-mesarthrocarpus_Contig9347.1.1|Name=mRNA_D-mesarthrocarpus_Contig9347.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=200bp
MSFNKTYQRLSSEQTPLERSERPNGEPPTTSQTGTALPVAQAVNDTKESG
RDCANPTEPCRASAPSMNEVYMGEPVLPVTYRGALPVGNPAMVVVRVPPS
ADILPSATVGNQRTVMFLPVNLEWGREPQSTTCPHCLHTGVTVTETDPCS
AMPVLCAFFCCICGMWPCSIFPFCFPEIRDTVHRCAHCNEVVGKQRQCK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006629LITAF
IPR037519LITAF_fam