prot_D-mesarthrocarpus_Contig9335.4.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9335.4.1
Unique Nameprot_D-mesarthrocarpus_Contig9335.4.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length76
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A7S2CDJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CDJ5_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.200e-10
Identity = 29/45 (64.44%), Postives = 39/45 (86.67%), Query Frame = 0
Query:   15 QVKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVKPKREVG 59
            QVK++ T+GY ALQ+G+ ++K KNVTKPLR H+ KAGVKPKR++G
Sbjct:   86 QVKEEATNGYTALQLGICDAKEKNVTKPLRVHYSKAGVKPKRKLG 130          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A2H6B4H6_9BACT (50S ribosomal protein L3 n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6B4H6_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 3.500e-10
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 0
Query:   16 VKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVKPKREV 58
            V+ KE DGY A+Q+GVG +KPKNV+KP+R HF KAGV+PK+ V
Sbjct:   38 VRTKERDGYTAVQIGVGRAKPKNVSKPMRGHFAKAGVEPKKVV 80          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A521UUE5_9BACT (50S ribosomal protein L3 n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A521UUE5_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 1.280e-9
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 RGWICTPIDA--VLPQQVKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVKPKREV 58
            R   CT I+A   +  QVK +++DGY ALQ+G G++KPKN T+P++ HF KA   PKR++
Sbjct:   20 RNIACTVIEAGPCVVTQVKNEDSDGYHALQLGYGDAKPKNTTRPMKGHFGKANTTPKRKI 79          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A2H6AW07_9BACT (50S ribosomal protein L3 n=1 Tax=bacterium HR39 TaxID=2035434 RepID=A0A2H6AW07_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 3.690e-9
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   16 VKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVKPKREV 58
            V+ KE DGY A+Q+G G  KPKNVTKP+R HF KAGV+PK ++
Sbjct:   38 VRTKEKDGYTAVQLGAGRRKPKNVTKPMRGHFAKAGVEPKAKL 80          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A1M7I4F6_9RHOB (50S ribosomal protein L3 n=7 Tax=Paracoccus TaxID=265 RepID=A0A1M7I4F6_9RHOB)

HSP 1 Score: 59.7 bits (143), Expect = 9.240e-9
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0
Query:   17 KKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVKPKREV 58
            +  ETDGYVALQ+G G++KPKNV+ P+R HF KA V PKR++
Sbjct:   39 RTNETDGYVALQLGAGDAKPKNVSAPMRGHFAKANVAPKRKI 80          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A7V5VP37_9BACT (50S ribosomal protein L3 n=1 Tax=Candidatus Fraserbacteria bacterium TaxID=2268184 RepID=A0A7V5VP37_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 9.630e-9
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
Query:   15 QVKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVKPKR 56
            Q+K  ETDGY A+Q+G G+ K KNVTKPL+ HF KAGV PKR
Sbjct:   37 QIKSIETDGYNAIQLGYGKVKEKNVTKPLKGHFNKAGVAPKR 78          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A1I4BYR8_9PROT (50S ribosomal protein L3 n=3 Tax=Acetobacteraceae TaxID=433 RepID=A0A1I4BYR8_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 1.260e-8
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    8 IDAVLPQQVKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVK-PKREVGLRI 62
            +D V     +  E DGYVALQVG+G +KPKNVTKP + HF KAGV+ P++ V  R+
Sbjct:   35 LDEVRVIAQRTAEKDGYVALQVGIGRAKPKNVTKPQKGHFAKAGVEAPRKTVEFRV 90          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: UPI00199BC33E (50S ribosomal protein L3 n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=UPI00199BC33E)

HSP 1 Score: 58.5 bits (140), Expect = 1.280e-8
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    5 CTPIDA--VLPQQVKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVKPKREV 58
            CT I A   +  QVK  E+DGY A+Q+G G+ K KN TKPL+ HF+KAG  PKR++
Sbjct:   24 CTLIQAGPCIVTQVKTVESDGYNAVQLGYGDKKEKNTTKPLQGHFKKAGTTPKRKL 79          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A840AHD5_9PROT (50S ribosomal protein L3 n=2 Tax=Acetobacteraceae TaxID=433 RepID=A0A840AHD5_9PROT)

HSP 1 Score: 58.5 bits (140), Expect = 1.630e-8
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    8 IDAVLPQQVKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVK-PKREVGLRI 62
            +DAV     + +ETDGY A+QVG+G +KPKNV+KP R HF KAGV+ P + V  R+
Sbjct:   34 VDAVRVVAQRTEETDGYTAVQVGLGTAKPKNVSKPNRGHFAKAGVEAPMKVVEFRV 89          
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Match: A0A1G9N2Z3_9BACT (50S ribosomal protein L3 n=5 Tax=Siphonobacter TaxID=700450 RepID=A0A1G9N2Z3_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 1.790e-8
Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    5 CTPIDA--VLPQQVKKKETDGYVALQVGVGESKPKNVTKPLREHFRKAGVKPKREV 58
            CT I+A   +  QVK  E DGY A+Q+G GE K KN +KPL  HF+KAG  PKR++
Sbjct:   24 CTLIEAGPCVVTQVKTVENDGYEAIQLGFGEKKEKNTSKPLAGHFKKAGTTPKRKL 79          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9335.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2CDJ5_9STRA2.200e-1064.44Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A2H6B4H6_9BACT3.500e-1065.1250S ribosomal protein L3 n=1 Tax=bacterium HR40 Ta... [more]
A0A521UUE5_9BACT1.280e-948.3350S ribosomal protein L3 n=1 Tax=Saprospiraceae ba... [more]
A0A2H6AW07_9BACT3.690e-962.7950S ribosomal protein L3 n=1 Tax=bacterium HR39 Ta... [more]
A0A1M7I4F6_9RHOB9.240e-961.9050S ribosomal protein L3 n=7 Tax=Paracoccus TaxID=... [more]
A0A7V5VP37_9BACT9.630e-966.6750S ribosomal protein L3 n=1 Tax=Candidatus Fraser... [more]
A0A1I4BYR8_9PROT1.260e-853.5750S ribosomal protein L3 n=3 Tax=Acetobacteraceae ... [more]
UPI00199BC33E1.280e-853.5750S ribosomal protein L3 n=1 Tax=Sphingobacteriace... [more]
A0A840AHD5_9PROT1.630e-853.5750S ribosomal protein L3 n=2 Tax=Acetobacteraceae ... [more]
A0A1G9N2Z3_9BACT1.790e-853.5750S ribosomal protein L3 n=5 Tax=Siphonobacter Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.810coord: 14..59
e-value: 5.3E-17
score: 64.0
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 12..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9335contigD-mesarthrocarpus_Contig9335:4714..4941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9335.4.1mRNA_D-mesarthrocarpus_Contig9335.4.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9335 4714..4941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9335.4.1 ID=prot_D-mesarthrocarpus_Contig9335.4.1|Name=mRNA_D-mesarthrocarpus_Contig9335.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=76bp
RGWICTPIDAVLPQQVKKKETDGYVALQVGVGESKPKNVTKPLREHFRKA
GVKPKREVGLRIGRASGSPCPDPSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel_sf