prot_D-mesarthrocarpus_Contig9309.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9309.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9309.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length36
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9309.1.1 vs. uniprot
Match: D7G1I0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I0_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 2.630e-8
Identity = 24/29 (82.76%), Postives = 27/29 (93.10%), Query Frame = 0
Query:    3 PYTREYYDILEKRKKLPVHQFLGDLIQKV 31
            PY+R+YYDILEKRKKLPVHQFL DL+ KV
Sbjct:   37 PYSRKYYDILEKRKKLPVHQFLDDLMDKV 65          
BLAST of mRNA_D-mesarthrocarpus_Contig9309.1.1 vs. uniprot
Match: A0A836CBU4_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU4_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 4.840e-5
Identity = 19/29 (65.52%), Postives = 25/29 (86.21%), Query Frame = 0
Query:    3 PYTREYYDILEKRKKLPVHQFLGDLIQKV 31
            PY+++YY+IL KRK LPVHQFL +L+ KV
Sbjct:   39 PYSQKYYEILTKRKTLPVHQFLQELLSKV 67          
BLAST of mRNA_D-mesarthrocarpus_Contig9309.1.1 vs. uniprot
Match: A0A448Z4P0_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z4P0_9STRA)

HSP 1 Score: 46.6 bits (109), Expect = 9.060e-5
Identity = 19/30 (63.33%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    3 PYTREYYDILEKRKKLPVHQFLGDLIQKVM 32
            PY+++YYDIL+KR KLPV+QF  +LI+KV+
Sbjct:   29 PYSQKYYDILDKRIKLPVYQFKDNLIKKVL 58          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9309.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1I0_ECTSI2.630e-882.76RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A836CBU4_9STRA4.840e-565.52RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A448Z4P0_9STRA9.060e-563.33Uncharacterized protein n=2 Tax=Pseudo-nitzschia T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9309contigD-mesarthrocarpus_Contig9309:4340..4447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9309.1.1mRNA_D-mesarthrocarpus_Contig9309.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9309 4340..4447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9309.1.1 ID=prot_D-mesarthrocarpus_Contig9309.1.1|Name=mRNA_D-mesarthrocarpus_Contig9309.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=36bp
NRPYTREYYDILEKRKKLPVHQFLGDLIQKVMPQP*
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