prot_D-mesarthrocarpus_Contig9287.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9287.2.1
Unique Nameprot_D-mesarthrocarpus_Contig9287.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length67
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9287.2.1 vs. uniprot
Match: D7FXM7_ECTSI (Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM7_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.790e-25
Identity = 48/66 (72.73%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    1 KALSKSQNDADTLINLVCCFRHLDKPAAFIDRHINQLRAAHPGHPYVCRLANNEAAFHRVAATFAV 66
            +A+SKSQNDADTL+NL+C  RHLDKPA+F+DR+INQL+ AHP HPYV  LAN E+AF RVAATFA+
Sbjct:  229 EAISKSQNDADTLVNLICVCRHLDKPASFVDRYINQLKTAHPQHPYVQSLANAESAFDRVAATFAL 294          
BLAST of mRNA_D-mesarthrocarpus_Contig9287.2.1 vs. uniprot
Match: A0A7S2XUN8_9STRA (Coatomer subunit epsilon n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUN8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.370e-17
Identity = 35/66 (53.03%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 KALSKSQNDADTLINLVCCFRHLDKPAAFIDRHINQLRAAHPGHPYVCRLANNEAAFHRVAATFAV 66
            +A SK+QND DTL+N++CC++HL KP  FI+R++NQL++  P HPYV  +   E AF RVA+T+A+
Sbjct:  226 QAASKNQNDPDTLVNMICCYQHLQKPEDFINRYVNQLKSVAPEHPYVKAMTTVEGAFDRVASTYAL 291          
BLAST of mRNA_D-mesarthrocarpus_Contig9287.2.1 vs. uniprot
Match: A0A7S2RZ95_9STRA (Coatomer subunit epsilon n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ95_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.510e-17
Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    2 ALSKSQNDADTLINLVCCFRHLDKPAAFIDRHINQLRAAHPGHPYVCRLANNEAAFHRVAATFA 65
            A+SK QND DTLINL+CC++H+ K +  ++RHI+QL+   P HP+V +LA  EAAF RV+A FA
Sbjct:  244 AISKGQNDPDTLINLICCYQHMGKSSDLVNRHISQLKTVAPNHPFVAQLATVEAAFDRVSAGFA 307          
BLAST of mRNA_D-mesarthrocarpus_Contig9287.2.1 vs. uniprot
Match: A0A836CM75_9STRA (Coatomer subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM75_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.620e-9
Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   10 ADTLINLVCCFRHLDKPAAFIDRHINQLRAAHPGHPYVCRLANNEAAFHRVAATFAV 66
            ADTL+NLV C RHLDKP +   +++ QL+  +P H Y   L N E+AF RV+ + AV
Sbjct:  241 ADTLVNLVTCCRHLDKPESQAQQYLEQLKEKYPNHAYTVTLRNAESAFSRVSDSLAV 297          
BLAST of mRNA_D-mesarthrocarpus_Contig9287.2.1 vs. uniprot
Match: U9T177_RHIID (Coatomer subunit epsilon n=8 Tax=Glomeraceae TaxID=36751 RepID=U9T177_RHIID)

HSP 1 Score: 56.6 bits (135), Expect = 9.190e-8
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 KALSKSQNDADTLINLVCCFRHLDKPAAFIDRHINQLRAAHPGHPYVCRLANNEAAFHRVAATFAV 66
            +AL+KS +D DTL+NL+     L+KPA  ++R+INQL+ A P H ++  L    + F R A  FA+
Sbjct:  244 EALNKSNDDPDTLVNLIVVSNLLNKPAEVVNRYINQLKEASPNHAFLQDLDLKSSLFDRAAQRFAL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9287.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXM7_ECTSI1.790e-2572.73Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XUN8_9STRA1.370e-1753.03Coatomer subunit epsilon n=1 Tax=Fibrocapsa japoni... [more]
A0A7S2RZ95_9STRA4.510e-1756.25Coatomer subunit epsilon n=1 Tax=Rhizochromulina m... [more]
A0A836CM75_9STRA3.620e-949.12Coatomer subunit epsilon n=1 Tax=Tribonema minus T... [more]
U9T177_RHIID9.190e-842.42Coatomer subunit epsilon n=8 Tax=Glomeraceae TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04733Coatomer_Ecoord: 2..64
e-value: 3.3E-15
score: 56.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..66
e-value: 1.4E-15
score: 59.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9287contigD-mesarthrocarpus_Contig9287:4742..4942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9287.2.1mRNA_D-mesarthrocarpus_Contig9287.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9287 4742..4942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9287.2.1 ID=prot_D-mesarthrocarpus_Contig9287.2.1|Name=mRNA_D-mesarthrocarpus_Contig9287.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=67bp
KALSKSQNDADTLINLVCCFRHLDKPAAFIDRHINQLRAAHPGHPYVCRL
ANNEAAFHRVAATFAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf