prot_D-mesarthrocarpus_Contig923.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig923.3.1
Unique Nameprot_D-mesarthrocarpus_Contig923.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length115
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: D8LAX1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX1_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 4.140e-22
Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0
Query:   14 EEIVRVGELPDLCSICLGEYKKDERVHVLPCLHIFHQECLDTWIEGHDSCPFCKRCLNHHP 74
            E +VRV ELPD+C+ICLG+Y   E VHVLPCLHIFH ECLD WI GH SCP+CK  LN  P
Sbjct:  311 ETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIP 371          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: A0A6H5JT04_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT04_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.020e-21
Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 0
Query:   14 EEIVRVGELPDLCSICLGEYKKDERVHVLPCLHIFHQECLDTWIEGHDSCPFCKRCLNHHP 74
            E +VRV ELPD+C+ICLG+Y   E VHVLPCLHIFH ECLD WI GH SCP+CK  LN  P
Sbjct:  405 ETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWICGHPSCPYCKGDLNVIP 465          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: UPI0019D509C8 (RING-H2 finger protein ATL16-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D509C8)

HSP 1 Score: 73.6 bits (179), Expect = 4.620e-13
Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   26 CSICLGEYKKDERVHVLP-CLHIFHQECLDTWIEGHDSCPFCKRCLNHHP--PALTKHQRTRRVLEALLMVP 94
            C++CLGE++ +ERV +LP CLH+FH +C+DTW++G  +CP C+  +  H   P L  HQ  R    A+ ++P
Sbjct:  155 CAVCLGEFEDEERVRMLPACLHVFHADCIDTWLQGSANCPLCRAAITCHCLLPPLDLHQLPRPDEVAIQVIP 226          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: A0A3B6PTW8_WHEAT (RING-type E3 ubiquitin transferase n=2 Tax=Triticum TaxID=4564 RepID=A0A3B6PTW8_WHEAT)

HSP 1 Score: 71.6 bits (174), Expect = 1.540e-12
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0
Query:   26 CSICLGEYKKDERVHVLP-CLHIFHQECLDTWIEGHDSCPFCKRCLNHHPPALTKHQRTRR 85
            C++CLGE+++ ERV +LP CLH+FH EC+DTW+ G  SCP C+  +      LT  +  RR
Sbjct:  171 CAVCLGEFQEGERVRLLPGCLHVFHAECIDTWLHGCASCPLCRAAITGKQAPLTMDRPPRR 231          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: UPI0018918CD7 (RING-H2 finger protein ATL1-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI0018918CD7)

HSP 1 Score: 71.2 bits (173), Expect = 2.010e-12
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   26 CSICLGEYKKDERVHVLP-CLHIFHQECLDTWIEGHDSCPFCKRCLNHHPPALTKHQRTRR 85
            C++CLGE+++ ERV +LP CLH+FH EC+DTW++G  +CP C+  +      LT  +  RR
Sbjct:  167 CAVCLGEFQEGERVRLLPGCLHVFHAECIDTWLQGCANCPLCRAAITGKQAPLTMDRPPRR 227          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: A0A7N2N416_QUELO (RING-type domain-containing protein n=2 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2N416_QUELO)

HSP 1 Score: 70.1 bits (170), Expect = 2.960e-12
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   26 CSICLGEYKKDERVHVLP-CLHIFHQECLDTWIEGHDSCPFCKRCLNHHPPALTKHQR 82
            C+ICL E++ D  + +LP C H+FHQEC+D W+E H +CP C+R L+  P +L K+ +
Sbjct:   62 CAICLLEFEDDSLLRLLPVCYHVFHQECIDVWLESHKTCPVCRRDLDLPPDSLDKYSK 119          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: UPI001F5DC713 (RING-H2 finger protein ATL1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DC713)

HSP 1 Score: 70.5 bits (171), Expect = 3.950e-12
Identity = 28/71 (39.44%), Postives = 47/71 (66.20%), Query Frame = 0
Query:   26 CSICLGEYKKDERVHVLP-CLHIFHQECLDTWIEGHDSCPFCKRCLNH--HPPALTKHQRTRRVLEALLMV 93
            C++CLGE++++ER+ +LP CLH+FH EC+DTW++G+ +CP C+  +      PA       +R  E ++ V
Sbjct:  160 CAVCLGEFQEEERIKLLPSCLHVFHAECIDTWLQGNANCPLCRAAITSTTQVPAADLQLHRQRPEEVIIQV 230          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: A0A2T7FDY5_9POAL (RING-type E3 ubiquitin transferase n=3 Tax=Panicum TaxID=4539 RepID=A0A2T7FDY5_9POAL)

HSP 1 Score: 70.9 bits (172), Expect = 4.240e-12
Identity = 24/49 (48.98%), Postives = 39/49 (79.59%), Query Frame = 0
Query:   26 CSICLGEYKKDERVHVLP-CLHIFHQECLDTWIEGHDSCPFCKRCLNHH 73
            C++CLGE++ +ERV +LP CLH+FH +C+DTW++G+ +CP C+  +  H
Sbjct:  154 CAVCLGEFEDEERVRMLPACLHVFHVDCIDTWLQGNANCPLCRAAITGH 202          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: T1KM53_TETUR (RING-type E3 ubiquitin transferase n=2 Tax=Tetranychus urticae TaxID=32264 RepID=T1KM53_TETUR)

HSP 1 Score: 69.7 bits (169), Expect = 6.340e-12
Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   26 CSICLGEYKKDERVHVLPCLHIFHQECLDTWIEGHDSCPFCKRCLNHHPPA 76
            C++C+ +YK DE V VLPC H++H +C+  W+E H +CP C++ LN + P+
Sbjct:  163 CTVCMEDYKLDEPVRVLPCNHVYHNDCIVPWLEMHGTCPICRKLLNENQPS 213          
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Match: A0A833QS01_9POAL (RING-type E3 ubiquitin transferase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QS01_9POAL)

HSP 1 Score: 69.7 bits (169), Expect = 9.870e-12
Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0
Query:   26 CSICLGEYKKDERVHVLP-CLHIFHQECLDTWIEGHDSCPFCKRCLNHHPPALTKHQRTRRVLEALLMVPLLPPREFWTH 104
            CS+CLGE+K+DE + +LP C H FH EC+D W+E H +CP C+  +   P  +  H           + P + PRE   H
Sbjct:  155 CSVCLGEFKEDESLRLLPECTHAFHVECIDKWLESHSNCPICRASVVSVPQPVQAH-----------VTPRVQPRESENH 223          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig923.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAX1_ECTSI4.140e-2268.85RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JT04_9PHAE2.020e-2168.85RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI0019D509C84.620e-1343.06RING-H2 finger protein ATL16-like n=1 Tax=Panicum ... [more]
A0A3B6PTW8_WHEAT1.540e-1247.54RING-type E3 ubiquitin transferase n=2 Tax=Triticu... [more]
UPI0018918CD72.010e-1245.90RING-H2 finger protein ATL1-like n=1 Tax=Triticum ... [more]
A0A7N2N416_QUELO2.960e-1246.55RING-type domain-containing protein n=2 Tax=Quercu... [more]
UPI001F5DC7133.950e-1239.44RING-H2 finger protein ATL1-like n=1 Tax=Lolium ri... [more]
A0A2T7FDY5_9POAL4.240e-1248.98RING-type E3 ubiquitin transferase n=3 Tax=Panicum... [more]
T1KM53_TETUR6.340e-1245.10RING-type E3 ubiquitin transferase n=2 Tax=Tetrany... [more]
A0A833QS01_9POAL9.870e-1238.75RING-type E3 ubiquitin transferase n=1 Tax=Carex l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 25..67
e-value: 0.0088
score: 7.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 26..66
e-value: 1.3E-7
score: 41.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 25..67
e-value: 1.6E-14
score: 54.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 26..67
score: 12.666314
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 3..72
e-value: 2.5E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR45798RING-H2 FINGER PROTEIN ATL61-RELATED-RELATEDcoord: 25..77
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 25..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig923contigD-mesarthrocarpus_Contig923:11501..13021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig923.3.1mRNA_D-mesarthrocarpus_Contig923.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig923 11251..13021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig923.3.1 ID=prot_D-mesarthrocarpus_Contig923.3.1|Name=mRNA_D-mesarthrocarpus_Contig923.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=115bp
LKLEEEEGEGEGLEEIVRVGELPDLCSICLGEYKKDERVHVLPCLHIFHQ
ECLDTWIEGHDSCPFCKRCLNHHPPALTKHQRTRRVLEALLMVPLLPPRE
FWTHRVEPSATYPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD