prot_D-mesarthrocarpus_Contig9226.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: A0A6H5JST3_9PHAE (RNA_pol_L_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST3_9PHAE) HSP 1 Score: 102 bits (253), Expect = 2.690e-26 Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 0
Query: 1 MQLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNTPVDALSTAIEDLSQEVDVLMRVFREQV 62
MQLL D+QVRFAGY+QPHPLENK+H+KVQTNGDNTPVDALS A EDLSQE++ L VF+EQV
Sbjct: 48 MQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEMEGLREVFQEQV 109
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: D7G4D0_ECTSI (RNA polymerase II core subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D0_ECTSI) HSP 1 Score: 102 bits (253), Expect = 9.660e-26 Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 0
Query: 1 MQLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNTPVDALSTAIEDLSQEVDVLMRVFREQV 62
MQLL D+QVRFAGY+QPHPLENK+H+KVQTNGDNTPVDALS A EDLSQE++ L VF+EQV
Sbjct: 95 MQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEMEGLREVFQEQV 156
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: A0A836CIX8_9STRA (Putative DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX8_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.680e-22 Identity = 48/74 (64.86%), Postives = 58/74 (78.38%), Query Frame = 0
Query: 1 MQLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNTPVDALSTAIEDLSQEVDVLMRVFREQVMSFQREDEPPHY 74
MQLLQD+QVRFAGY+ PHPLEN + VKVQTNG+ TP+DALSTAIEDL+ EVD L + F E V++ +R E Y
Sbjct: 48 MQLLQDRQVRFAGYLMPHPLENIMRVKVQTNGEVTPMDALSTAIEDLTSEVDNLTQRFAEGVLACKRLQESRQY 121
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: A0A6G0X3S2_9STRA (RNA_pol_L_2 domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X3S2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.560e-14 Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 1 MQLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNTPVDALSTAIEDLSQEVDVLMRVFR 59
MQLL+DK V FAGY PHPL N + +++QTN D+TP+ ALS ++DLS E D L +FR
Sbjct: 48 MQLLRDKNVTFAGYQHPHPLVNDIKIRIQTNNDSTPIQALSNCLDDLSIEFDELALLFR 106
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: K0SS38_THAOC (RNA_pol_L_2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SS38_THAOC) HSP 1 Score: 69.7 bits (169), Expect = 1.450e-13 Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query: 1 MQLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNT-PVDALSTAIEDLSQEVDVLMRVFREQVMSFQREDE 70
MQLL+D QV+FAGY+ PHPL N++H+KVQT+ P ++LS AIEDLS E D L+ + + ++RE++
Sbjct: 49 MQLLRDPQVKFAGYMHPHPLVNRIHLKVQTSTSQVAPTESLSAAIEDLSNETDHLITSVTDAIEKWKREND 119
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: A0A7R9WNF7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WNF7_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 4.620e-13 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 0
Query: 1 MQLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNT-PVDALSTAIEDLSQEVDVLMRVFREQVMSFQREDE 70
MQLL+D VRFAGY PHPL + +++K+QTN PV+ LS+AIEDLS E D L F+E + +++RE++
Sbjct: 50 MQLLRDPSVRFAGYYHPHPLVHFLNMKIQTNNSTVAPVEVLSSAIEDLSNETDHLTSQFQEAIDTWKREND 120
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: A0A1I8A8U0_9BILA (RNA_pol_L_2 domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8A8U0_9BILA) HSP 1 Score: 65.9 bits (159), Expect = 3.870e-12 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 0
Query: 2 QLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNTPVDALSTAIEDLSQEVDVLMRVFREQVMSFQR 67
QLL+D QV FAGY PHPL++K+ +++QT D TP DAL++AI DL E+ + FR+ V +R
Sbjct: 49 QLLKDPQVLFAGYRNPHPLDHKIVIRIQTTSDTTPADALTSAITDLLAELSLFEERFRDAVTDKER 114
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: A0A024UNE3_9STRA (RNA_pol_L_2 domain-containing protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UNE3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 4.260e-12 Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 0
Query: 1 MQLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNTPVDALSTAIEDLSQEVDVLMRVFR 59
MQLL+DK V FAGY PHPL N V +++QTN +++P+ AL ++DLS E D L +FR
Sbjct: 48 MQLLRDKNVTFAGYQHPHPLVNDVKIRIQTNNNSSPIQALGNCLDDLSIEFDELALLFR 106
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: A0A1D2NJL6_ORCCI (DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NJL6_ORCCI) HSP 1 Score: 65.5 bits (158), Expect = 5.750e-12 Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 0
Query: 2 QLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNTPVDALSTAIEDLSQEVDVLMRVFREQVMSFQ 66
QLL+D V FAGY QPHPLE+K+ ++VQT D TP DA+ AI DL E+ +L FRE + Q
Sbjct: 49 QLLKDPHVLFAGYKQPHPLEHKIIIRVQTTADYTPQDAMRNAIMDLISELSLLEERFREAIKEKQ 113
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Match: A0A226DPL2_FOLCA (DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DPL2_FOLCA) HSP 1 Score: 65.5 bits (158), Expect = 5.750e-12 Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0
Query: 1 MQLLQDKQVRFAGYIQPHPLENKVHVKVQTNGDNTPVDALSTAIEDLSQEVDVLMRVFREQVMSFQ 66
MQLL+D V FAGY QPHPL+ K+ ++VQT D TP DAL AI DL E+ +L FR+ + Q
Sbjct: 48 MQLLKDPHVLFAGYKQPHPLDPKILIRVQTTADYTPQDALKNAITDLISELSLLEERFRDAIKEKQ 113 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9226.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_D-mesarthrocarpus_Contig9226.1.1 ID=prot_D-mesarthrocarpus_Contig9226.1.1|Name=mRNA_D-mesarthrocarpus_Contig9226.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=77bpback to top |