prot_D-mesarthrocarpus_Contig9199.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9199.2.1
Unique Nameprot_D-mesarthrocarpus_Contig9199.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length252
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: D8LF99_ECTSI (Protein for assembly of pre-ribosomal particles containing 18S rRNA n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF99_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 2.490e-92
Identity = 180/251 (71.71%), Postives = 203/251 (80.88%), Query Frame = 0
Query:    1 QAKGEDVKIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAPREGGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPRPKQGIQNFTGTKKTFD 251
            +AK E+ KIY+RGLPW+T D+DV  FFK CG IV +EQP + DGRSSGTA++TF+  ++A KAIELDGQELGGRWLKI M+ E+P        GE K KP GCTTVFIGNLSWSIDEDT+R  FG+CGDIKSVRFAEDRETGEFRGFGHVEFYDG  VDAAM+LA ++VMGRPIRVDYAAPRAPR+              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF+ R KQGIQ+F GTKK+FD
Sbjct:  276 KAKSENSKIYLRGLPWDTSDDDVKDFFKACGKIVTVEQPKNPDGRSSGTAYVTFDSAAAAAKAIELDGQELGGRWLKIMMSFEKP---DHARNGEPKVKPAGCTTVFIGNLSWSIDEDTIRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANSDVMGRPIRVDYAAPRAPRDDS------FGGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNARAKQGIQSFQGTKKSFD 517          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: A0A835ZAT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT4_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.630e-74
Identity = 113/185 (61.08%), Postives = 140/185 (75.68%), Query Frame = 0
Query:    2 AKGEDVKIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAPRE 186
            + G   KIYVRGLPW+  +E+V  FFK+CG I   + P  H+GR+SGTAF+ F D+ +ANK+ E        RWLKI +A ER    S G   +KK+KP+GCTTVFIGNLSW +DED VR+AFG+CG+I SVRFA DRETG+F+GFGHVEF DG  VDAA+++AGTE+ GRP+RVDYAAPRAPRE
Sbjct:   95 STGAGTKIYVRGLPWSATEEEVRDFFKECGEIESCDLPTDHNGRASGTAFVVFADSDAANKSRE--------RWLKIVLATERAARPSFGAP-DKKDKPEGCTTVFIGNLSWDVDEDAVRAAFGECGEIASVRFATDRETGDFKGFGHVEFVDGEGVDAAIDMAGTEIAGRPVRVDYAAPRAPRE 270          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: A0A7S2V571_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V571_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.910e-71
Identity = 108/190 (56.84%), Postives = 141/190 (74.21%), Query Frame = 0
Query:    1 QAKGEDV--KIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAPREGG 188
            + KG++V  K++++GLPW T +  +  FFK  GTI  ++QPL+ DGR+SGTA++ F+   SA KA+ELDG  +G RW+K+ +A++ PP    G      EKP+GC TVFIGNLSW IDEDTVR  FGDCGDIKSVRFAEDRETG FRGFG+V+FYDG   D AM+L G+++MGR +R+DY+APR    GG
Sbjct:  303 KPKGDEVDRKVFMKGLPWETEEYQIKDFFKGIGTIESIDQPLNKDGRASGTAYVVFDSTESAEKALELDGGTVGERWVKLILARDIPPPPKPG------EKPEGCDTVFIGNLSWDIDEDTVRQTFGDCGDIKSVRFAEDRETGRFRGFGYVQFYDGDATDEAMKLNGSDLMGREVRIDYSAPRGFGGGG 486          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: A0A7S3UY59_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY59_HETAK)

HSP 1 Score: 226 bits (575), Expect = 2.730e-67
Identity = 104/181 (57.46%), Postives = 128/181 (70.72%), Query Frame = 0
Query:    8 KIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAPREGG 188
            +I+V+GLPW   D++V  FFKDCGTI+  + P  H+GR+SGTA+++F  +   NKA ELDG   G RWLKI  A+ERP     G      E+P+GC TVF GNLSW IDE+++R  F DCGDI SVRFAEDRETG+FRGFG+V FYDG C D AM+L G  V GR IR+DY+APR    GG
Sbjct:  332 RIFVKGLPWAATDDEVKEFFKDCGTILDCDMPKDHNGRASGTAYVSFSTDDERNKAYELDGATFGERWLKIEEARERPAAAKPG------ERPEGCDTVFCGNLSWDIDEESLREFFKDCGDISSVRFAEDRETGKFRGFGYVSFYDGACTDEAMKLTGQVVAGREIRLDYSAPRDRSGGG 506          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: W7TQX9_9STRA (RNA binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX9_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.860e-64
Identity = 104/190 (54.74%), Postives = 136/190 (71.58%), Query Frame = 0
Query:    5 EDVKIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELG--GRWLKISM----AQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAPREGG 188
            ED K++V+GLPW+  +E+V AFF+ CG +  +E PL  DGRSSGTA+I F +     KA+ ++ +  G  GRW+++      A  +  G+  GF     EKP+GC +VFIGNLSW+IDE+T+RSAF  CG++ SVRFA DRETGEFRGFGHV+F D T  +AA+++AGT VMGR IRVDYA PR PREGG
Sbjct:  273 EDRKVFVQGLPWSATEEEVRAFFQKCGPMTSVELPLK-DGRSSGTAYIVFGEEDGVGKAVAMNEEIFGDSGRWVRVRKYEPTAAGKDGGKGMGFARPPSEKPEGCMSVFIGNLSWNIDEETIRSAFASCGEVTSVRFATDRETGEFRGFGHVDFADETAPEAAVQMAGTPVMGREIRVDYAQPRPPREGG 461          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: A0A7S3Q248_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q248_9STRA)

HSP 1 Score: 209 bits (533), Expect = 6.300e-62
Identity = 95/185 (51.35%), Postives = 125/185 (67.57%), Query Frame = 0
Query:    4 GEDVKIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAPREGG 188
            G   K+Y+RGLPW   D+++  +F  CG IV  E PL  DGRSSGTA I F    +  K + L+G++ GGRWL I  A ++P   ++    E  EKP  C TVF GNLSW++DEDT+R  F +CG+I S+RFA DRETGEF+GFGH+EF+     DAA+ +AGT++MGR +RVDYAA +  R GG
Sbjct:  203 GAGKKMYIRGLPWRATDDELREYFASCGEIVSCELPLQSDGRSSGTAEIEFSTKDACEKCMALNGEDFGGRWLSIKYASDKPAFAAR----ETSEKPPDCKTVFCGNLSWNVDEDTLRETFAECGEISSIRFATDRETGEFKGFGHIEFFSSDSTDAAIAMAGTDIMGRAVRVDYAADK--RAGG 381          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: A0A7S2RIH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIH6_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.360e-61
Identity = 94/179 (52.51%), Postives = 126/179 (70.39%), Query Frame = 0
Query:    4 GEDVKIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPR 182
            G   KI++RGLPW   ++++   F  CG I ++EQP++ DGRSSGTA I F   SSA  A+E++G + GGRWL I +A ++P    +       EKP+GC T+FIGNLSW IDED+VR AF +CG+I +VRFAED+ETG+FRGFGHVEF +      A+ +AGT++MGR +RVDYA  R
Sbjct:  201 GAKSKIFIRGLPWRASEDEIREHFGGCGEIKEVEQPMNSDGRSSGTALIVFGSASSAESAVEMNGGDFGGRWLDIKLADDKPIQTERA----PSEKPEGCLTIFIGNLSWQIDEDSVREAFQECGEITTVRFAEDKETGDFRGFGHVEFANTDSTTQAVAMAGTDIMGRAVRVDYAQDR 375          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: A0A1Z5KL43_FISSO (Nucleolin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL43_FISSO)

HSP 1 Score: 207 bits (528), Expect = 1.860e-60
Identity = 96/175 (54.86%), Postives = 120/175 (68.57%), Query Frame = 0
Query:    5 EDVKIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYA 179
            E  K+YVRGLPW   + +V  FF  CG I   E PL  DGRSSGTA I FE N  A  AIEL+G +  GRWL I  +  +P   ++    E  +K DGC TVF+GNL+W +DEDT+R AFG+CG+I SVRFA DRETGEF+GFGH+EF D    D A+ +AGT+++GR +RVDYA
Sbjct:  273 EGNKVYVRGLPWKAEEHEVQEFFAACGPIKSCEMPLMDDGRSSGTAIIEFETNEGAAAAIELNGGDFQGRWLSIKYSTPKPILSAR----EPTQKQDGCVTVFVGNLAWDVDEDTLRQAFGECGEITSVRFATDRETGEFKGFGHIEFTDTEATDKAIAMAGTDILGRQVRVDYA 443          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: A0A7S1DDH5_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDH5_CYCTE)

HSP 1 Score: 189 bits (480), Expect = 4.020e-57
Identity = 91/178 (51.12%), Postives = 120/178 (67.42%), Query Frame = 0
Query:   15 PWNTPDEDVSAFF-KDCG---TIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAPREGG 188
            PW   +E+V  +F   CG    I+  E PL +DGRSSGTA I F    +A KA+EL+G++  GRWL I  +  +P    +    E  +K DGC TVF+GNLSW+IDEDT++  FG+CG+IK VRFA D+ET +F+G+GH+EFY+    D AMELAGT++MGRP+RVDYA  R    GG
Sbjct:    1 PWRASEEEVREYFASSCGGVECILTCELPLMNDGRSSGTAIIEFASVEAAAKAVELNGEDFQGRWLNIKYSTPKPIMAPR----EPTQKQDGCVTVFVGNLSWNIDEDTLKEVFGECGEIKMVRFATDKETEDFKGYGHIEFYETEATDKAMELAGTDIMGRPVRVDYANDRRKSFGG 174          
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Match: L1IVG6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IVG6_GUITC)

HSP 1 Score: 191 bits (485), Expect = 9.940e-57
Identity = 88/191 (46.07%), Postives = 125/191 (65.45%), Query Frame = 0
Query:    2 AKGEDVKIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTAFITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEK--------KEKPDGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHVEFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAP 184
            A G+  ++++ GLP+   ++D+   F+ CG I  +E P++ D R +G  F+TF+D  S  KA+ +DGQEL GRW+K+  A       ++G  G+K        K KPDGCTT+F+GNLSW +DEDT+RS F DCG++ +VRFA DRETG+F+GFGHV+F + +  D A+   G  V GR IRVD+A  R P
Sbjct:   20 AAGDKRRVFLGGLPFKATEKDIKKMFESCGAIENIELPMNADSRPAGFGFLTFKDADSVAKAVAMDGQELMGRWVKVKEAD-----GTEGSAGKKPFTPNREPKPKPDGCTTIFMGNLSWDVDEDTIRSFFADCGEVVNVRFATDRETGDFKGFGHVQFAESSATDLAVAKGGEFVAGRAIRVDFAEDRKP 205          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9199.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF99_ECTSI2.490e-9271.71Protein for assembly of pre-ribosomal particles co... [more]
A0A835ZAT4_9STRA2.630e-7461.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V571_9STRA2.910e-7156.84Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3UY59_HETAK2.730e-6757.46Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TQX9_9STRA2.860e-6454.74RNA binding protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S3Q248_9STRA6.300e-6251.35Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2RIH6_9STRA1.360e-6152.51Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A1Z5KL43_FISSO1.860e-6054.86Nucleolin n=2 Tax=Fistulifera solaris TaxID=151956... [more]
A0A7S1DDH5_CYCTE4.020e-5751.12Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
L1IVG6_GUITC9.940e-5746.07Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 105..177
e-value: 3.6E-23
score: 93.0
coord: 8..79
e-value: 3.2E-18
score: 76.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 9..75
e-value: 6.3E-16
score: 58.0
coord: 106..175
e-value: 2.0E-15
score: 56.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 104..181
score: 17.199404
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 7..83
score: 16.977684
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..97
e-value: 3.8E-23
score: 84.1
coord: 98..241
e-value: 1.4E-28
score: 101.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..251
NoneNo IPR availablePANTHERPTHR48024GEO13361P1-RELATEDcoord: 6..251
NoneNo IPR availablePANTHERPTHR48024:SF11NUCLEAR LOCALIZATION SEQUENCE-BINDING PROTEINcoord: 6..251
IPR034362PHIP1, RNA recognition motif 2CDDcd12272RRM2_PHIP1coord: 105..177
e-value: 5.79856E-32
score: 110.174
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 98..213
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 4..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9199contigD-mesarthrocarpus_Contig9199:1472..4794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9199.2.1mRNA_D-mesarthrocarpus_Contig9199.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9199 1472..4794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9199.2.1 ID=prot_D-mesarthrocarpus_Contig9199.2.1|Name=mRNA_D-mesarthrocarpus_Contig9199.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=252bp
QAKGEDVKIYVRGLPWNTPDEDVSAFFKDCGTIVKLEQPLSHDGRSSGTA
FITFEDNSSANKAIELDGQELGGRWLKISMAQERPPGQSKGFGGEKKEKP
DGCTTVFIGNLSWSIDEDTVRSAFGDCGDIKSVRFAEDRETGEFRGFGHV
EFYDGTCVDAAMELAGTEVMGRPIRVDYAAPRAPREGGPSGGGRGGGGGR
GRGGGRGGGGRGGGGRGGGRGGGRGGGRGGGFSPRPKQGIQNFTGTKKTF
D*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR034362PHIP1_RRM2
IPR035979RBD_domain_sf