prot_D-mesarthrocarpus_Contig9082.1.2 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9082.1.2
Unique Nameprot_D-mesarthrocarpus_Contig9082.1.2
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length174
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: A0A6H5J9K7_9PHAE (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K7_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.570e-64
Identity = 115/170 (67.65%), Postives = 131/170 (77.06%), Query Frame = 0
Query:    1 QVIPITIPRVFYVNSLVSS--AGATRMGRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFYVQGTNEEIEREP 168
            QVIPITIPRVFYVN L     AG++ MGRRV RTLPNG    FL+EVAMDE  FQR EK+V  FL H  +EGVYELGTP +YRA LHLG VARV  GRA  LK V+ G+GQ  GFELEDLELVT A HPYL PSV++F+ IY+YHS S +RGM+ +FYVQGTNE+IE EP
Sbjct:  487 QVIPITIPRVFYVNCLEDKGPAGSSIMGRRVARTLPNGRASPFLYEVAMDEAKFQRNEKQVEDFLHHAGIEGVYELGTPLVYRAMLHLGSVARVVQGRAKALKGVKSGSGQAPGFELEDLELVTAAAHPYLHPSVATFKHIYLYHSSSGKRGMVGLFYVQGTNEDIEPEP 656          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: D8LQB9_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB9_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.420e-27
Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 0
Query:   84 LHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFYVQGTNEEIEREP 168
            LHLG VARV  GRA  LK V+ G+GQ  GFELEDLELVT A HPYL PSV++F+ IY+YHS S +RGM+ +FYV+GTNE+IE EP
Sbjct:    2 LHLGSVARVVQGRAKALKGVKSGSGQAPGFELEDLELVTAAAHPYLHPSVATFKHIYLYHSSSGKRGMVGLFYVEGTNEDIEPEP 86          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: A0A438KGM5_VITVI (DNA polymerase epsilon catalytic subunit n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KGM5_VITVI)

HSP 1 Score: 100 bits (250), Expect = 1.320e-22
Identity = 60/156 (38.46%), Postives = 91/156 (58.33%), Query Frame = 0
Query:    3 IPITIPRVFYVNSLVSSAGATRM--GRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFY 156
            IPIT+PRVFY+NS    A  T    GRRVN+TLP+GH    L E+ +DED F+   ++++  L  P+VEG+YE   P  + A L +GCV +V   +    ++++       G+ L +L + TT   PYL+ S+S F   Y+YHS S+ R +   ++
Sbjct:   75 IPITVPRVFYLNS---KAPITEEFPGRRVNKTLPHGHHSYNLIEIIIDEDQFRGESRKLAAHLADPEVEGIYETKVPLEFNAVLQIGCVCKV--DKTAKKRNIQ------DGWSLSELHMKTTTECPYLEQSISFF---YLYHSISEGRAIYVGYF 216          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: UPI001B7ED605 (DNA polymerase epsilon catalytic subunit A-like isoform X2 n=1 Tax=Juglans microcarpa x Juglans regia TaxID=2249226 RepID=UPI001B7ED605)

HSP 1 Score: 103 bits (256), Expect = 2.590e-22
Identity = 61/156 (39.10%), Postives = 92/156 (58.97%), Query Frame = 0
Query:    3 IPITIPRVFYVNSLVSSAGATR--MGRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFY 156
            IPIT+PRVFY+NS    A  T   +GRRVN+ LP+G     L+EV +DED F++  K+++  L  P+VEG+YE   P  + A L +GCV +V   +    ++V+       G+ L +L + TT    YL+ S+S F   Y+YHS S+RR +   ++
Sbjct: 1355 IPITVPRVFYLNS---KAPVTEEFLGRRVNKILPHGRHSYNLYEVTIDEDQFRKYSKKLAALLADPEVEGIYETKVPLEFNAVLQIGCVCKVE--KTAKKRNVQ------DGWSLSELHMKTTTECSYLEQSISFF---YLYHSMSERRAICIGYF 1496          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: A0A2I4GKU6_JUGRE (DNA polymerase epsilon catalytic subunit n=6 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GKU6_JUGRE)

HSP 1 Score: 102 bits (254), Expect = 4.800e-22
Identity = 61/156 (39.10%), Postives = 92/156 (58.97%), Query Frame = 0
Query:    3 IPITIPRVFYVNSLVSSAGATR--MGRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFY 156
            IPIT+PRVFY+NS    A  T   +GRRVN+ LP+G     L+EV +DED F++  K+++  L  P+VEG+YE   P  + A L +GCV +V   +    ++V+       G+ L +L + TT    YL+ S+S F   Y+YHS S+RR +   ++
Sbjct: 1355 IPITVPRVFYLNS---KAPVTEEFLGRRVNKILPHGRHSYNLYEVTIDEDQFRKYSKKLAALLADPEVEGIYETKVPLEFNAILQIGCVCKVE--KTAKKRNVQ------DGWSLSELHMKTTTECSYLEQSISFF---YLYHSISERRAICIGYF 1496          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: UPI0019225470 (LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI0019225470)

HSP 1 Score: 101 bits (252), Expect = 8.900e-22
Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 0
Query:    3 IPITIPRVFYVNSLVSSAGATRMGRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFY 156
            +PIT+PRVFY+NS  ++      GRRVN+TLP+G   + L EV +DED F+R  K+++  L  P++EG+YE   P  + A L LGCV +V        K  +    Q  G+ L +L + TT    YL+ ++S F   Y+YHS  + R + A ++
Sbjct: 1351 VPITVPRVFYLNSK-ATISENFPGRRVNKTLPHGRQSNNLFEVIIDEDQFKRESKKLAALLADPEIEGIYERKIPLEFNAILQLGCVCKVD-------KATKKRNAQ-DGWSLSELHMKTTTECAYLEQAISFF---YLYHSICEGRAIYAAYF 1492          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: A0A6A2YTS2_HIBSY (DNA polymerase epsilon catalytic subunit n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YTS2_HIBSY)

HSP 1 Score: 101 bits (252), Expect = 8.900e-22
Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 0
Query:    3 IPITIPRVFYVNSLVSSAGATRMGRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFY 156
            +PIT+PRVFY+NS  ++      GRRVN+TLP+G   + L EV +DED F+R  K+++  L  P++EG+YE   P  + A L LGCV +V        K  +    Q  G+ L +L + TT    YL+ ++S F   Y+YHS  + R + A ++
Sbjct:  962 VPITVPRVFYLNSK-ATISENFPGRRVNKTLPHGRQSNNLFEVIIDEDQFKRESKKLAALLADPEIEGIYERKIPLEFNAILQLGCVCKVD-------KATKKRNAQ-DGWSLSELHMKTTTECAYLEQAISFF---YLYHSICEGRAIYAAYF 1103          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: F6GW32_VITVI (DNA polymerase epsilon catalytic subunit n=3 Tax=Vitis TaxID=3603 RepID=F6GW32_VITVI)

HSP 1 Score: 100 bits (249), Expect = 2.260e-21
Identity = 59/156 (37.82%), Postives = 92/156 (58.97%), Query Frame = 0
Query:    3 IPITIPRVFYVNS--LVSSAGATRMGRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFY 156
            IPIT+PRVFY+NS  L++       GRRVN+TLP+GH    L E+ +DED F+   ++++  L  P+VEG+YE   P  + A L +GCV +V   +    ++++       G+ L +L + TT   PYL+ S+S F   Y+YHS S+ R +   ++
Sbjct: 1539 IPITVPRVFYLNSKALITEEFP---GRRVNKTLPHGHHSYNLIEIIIDEDQFRGESRKLAAHLADPEVEGIYETKVPLEFNAVLQIGCVCKV--DKTAKKRNIQ------DGWSLSELHMKTTTECPYLEQSISFF---YLYHSISEGRAIYVGYF 1680          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: A0A6J1K6J2_CUCMA (DNA polymerase epsilon catalytic subunit n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1K6J2_CUCMA)

HSP 1 Score: 99.8 bits (247), Expect = 4.170e-21
Identity = 58/154 (37.66%), Postives = 90/154 (58.44%), Query Frame = 0
Query:    3 IPITIPRVFYVNSLVSSAGATRMGRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFY 156
            IPIT+PRVFY+NS V       +GRRVN+TLP+G     L+EV  DE  F+    +++  L  P+VEG+YE   P  +++ L +GCV +V   R    ++++       G+ LE+L++ TT    YL+ S+S F   ++YHS S+ R +   F+
Sbjct: 1345 IPITVPRVFYLNSKVPITDEF-VGRRVNKTLPHGRHSYNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSILQIGCVCKV--DRTAKKRNIQ------DGWSLEELQMKTTTECSYLEKSISFF---FVYHSISEGRAIYITFF 1486          
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Match: A0A061GZR6_THECC (DNA polymerase epsilon catalytic subunit n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061GZR6_THECC)

HSP 1 Score: 98.6 bits (244), Expect = 9.960e-21
Identity = 59/154 (38.31%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    3 IPITIPRVFYVNSLVSSAGATRMGRRVNRTLPNGHTPSFLHEVAMDEDAFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLLKDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRGMLAVFY 156
            +PIT+PRVFY+NS  ++   +  GRRVN+TLP+      L EV +DED F+R  K+++  L  P++EG+YE   P  + A L LGCV +V        K  +    Q  G+ L +L + TT    YL+ ++S F   Y+YHS  + R M A ++
Sbjct:  632 VPITVPRVFYLNSK-ATISESFPGRRVNKTLPHSRQSYNLIEVIIDEDHFRRESKKLAALLADPEIEGIYERKVPLEFNAILQLGCVCKVD-------KTAKKRNAQ-DGWSLSELHMKTTTECAYLEQAISFF---YLYHSICEGRAMYAGYF 773          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9082.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9K7_9PHAE1.570e-6467.65DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
D8LQB9_ECTSI1.420e-2767.06DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A438KGM5_VITVI1.320e-2238.46DNA polymerase epsilon catalytic subunit n=1 Tax=V... [more]
UPI001B7ED6052.590e-2239.10DNA polymerase epsilon catalytic subunit A-like is... [more]
A0A2I4GKU6_JUGRE4.800e-2239.10DNA polymerase epsilon catalytic subunit n=6 Tax=J... [more]
UPI00192254708.900e-2238.31LOW QUALITY PROTEIN: DNA polymerase epsilon cataly... [more]
A0A6A2YTS2_HIBSY8.900e-2238.31DNA polymerase epsilon catalytic subunit n=1 Tax=H... [more]
F6GW32_VITVI2.260e-2137.82DNA polymerase epsilon catalytic subunit n=3 Tax=V... [more]
A0A6J1K6J2_CUCMA4.170e-2137.66DNA polymerase epsilon catalytic subunit n=3 Tax=C... [more]
A0A061GZR6_THECC9.960e-2138.31DNA polymerase epsilon catalytic subunit n=1 Tax=T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9082contigD-mesarthrocarpus_Contig9082:892..3746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9082.1.2mRNA_D-mesarthrocarpus_Contig9082.1.2Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9082 890..3746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9082.1.2 ID=prot_D-mesarthrocarpus_Contig9082.1.2|Name=mRNA_D-mesarthrocarpus_Contig9082.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=174bp
QVIPITIPRVFYVNSLVSSAGATRMGRRVNRTLPNGHTPSFLHEVAMDED
AFQRGEKRVSKFLLHPDVEGVYELGTPALYRACLHLGCVARVAPGRAGLL
KDVRMGAGQVAGFELEDLELVTTAMHPYLDPSVSSFRRIYMYHSRSKRRG
MLAVFYVQGTNEEIEREPEELTST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029703POL2