prot_D-mesarthrocarpus_Contig898.12.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig898.12.1
Unique Nameprot_D-mesarthrocarpus_Contig898.12.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length227
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.350e-84
Identity = 133/219 (60.73%), Postives = 168/219 (76.71%), Query Frame = 0
Query:    5 TQMFLVAAAAAMATSSAFVQHIAGSISMRSKHAAPSAATMTAGSDYVATLPGTPFPDGAVWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILG 223
            TQ+FL +AA  +A+S+AFV  +A  +   +  ++ SA  M+AGSDYVATLPG PF DG ++DP+  S   DP  IKK+REAE+KHGRVAMLA++G+LVAE +HPLFMGPDYIGPAVDHFQEI+A++P FWV +  G+AFIEY +I   +    + TG G LK +Y PGDLGFDPL L+PE+  AL  M+TKELNNGRLAMIG+AGMLVQEL++   ILG
Sbjct:    4 TQLFLGSAATLIASSTAFVAPMA--VRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 5.640e-84
Identity = 134/223 (60.09%), Postives = 168/223 (75.34%), Query Frame = 0
Query:    1 MKTSTQMFLVAAAAAMATSSAFVQHIAGSISMRSKHAAPSAATMTAGSDYVATLPGTPFPDGAVWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILG 223
            M  S+ MFL  AA  +A+S+AFV  +A  +   +  ++ SA  M+AGSDYVATLPG PF DG ++DP+  S   +P  IK +REAE+KHGRVAMLA VG++VAE +HPLFMGPDYIGPAVDHFQEI+A+FP FW  +  G+AFIEY +IT+ + E    TG G L+ EY+PGDLGFDPL L+P++   L+ MQTKELNNGRLAMIG+AGMLVQELV+   ILG
Sbjct:    1 MVASSNMFLGTAATLIASSTAFVAPMA--VRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 2.380e-82
Identity = 121/183 (66.12%), Postives = 146/183 (79.78%), Query Frame = 0
Query:   41 AATMTAGSDYVATLPGTPFPDGAVWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILG 223
            AA M+AGSDYV+TLPG PF DG VWDPVG S++ DPE IKK+REAE+KHGRVAMLA+VG+LVAE+FHPLF+GPDYIGPA+ HF+EITARFP FW      IA++EY+ I  G+ E+D  TG G ++ +Y PGDLGFDPLGL PE+   L  M+TKELN+GRLAMIG+ GM+VQELV    I G
Sbjct:   89 AARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 5.220e-82
Identity = 135/224 (60.27%), Postives = 164/224 (73.21%), Query Frame = 0
Query:    6 QMFLVAAAAAMATSSAFVQHIAGSISMRSKHAAPSAATMTAGSDYVATLPGTPF---PDGAVWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILGHFV 226
            Q+FL  AA  +A+S+AFV  IA   S  ++ AA S   MTAGSDY A+LPG PF    +G  +DP G +T  DPETIKK+REAE+KHGRV+MLAAVGILV+E FHPLFMGP YIGPAV+H Q+I   +P FWVA+   IAFIE Q+I   WG V   TG GNLK EY PGDLGFDPLGL P++ E  + +Q++EL+ GR AMIGV GM+VQE+VD +GIL H V
Sbjct:    5 QLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGILEHIV 228          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 4.790e-81
Identity = 131/220 (59.55%), Postives = 163/220 (74.09%), Query Frame = 0
Query:    6 QMFLVAAAAAMATSSAFVQHIAGSISMRSKHAAPSAATMTAGSDYVATLPGTPFPDGAVWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILGHF 225
            QMFL  AAA +A+S+AFV  +A  +   +  +A SA  M+AGSDYVATLPG PF DG ++DP+  S    P  IKK+REAE+KHGRVAMLA++GILVAE +HPLFMG D+IGPA+ HFQEI+A+FP FW  +  G+AFIEY +I   +    + TG G LK +Y PGDLGFDPL L+P+   AL  M+TKELNNGRLAMIG+AGML QELV+ Q IL +F
Sbjct:    5 QMFLGTAAALIASSTAFVAPVA--VRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDILPNF 222          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 6.570e-75
Identity = 124/223 (55.61%), Postives = 161/223 (72.20%), Query Frame = 0
Query:    1 MKTSTQMFLVAAAAAMATSSAFVQHIAGSISMRSKHAAPSAATMTAGSDYVATLPGTPFPDGAVWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILG 223
            M  S+ MFL  AA  +A+S+AFV  +A  +   +  ++ SA  M+AG+DY+ATLPG    +G ++D +  +   DP  IK +REAE+KHGRVAMLA VG++VAE +HP FMGPDYIGPAVDHFQEITA+FP FW  +  G+AFIEY +I + + E    TG G L+ EY+PGDLGFDP  ++P++   L+ MQ KELNNGRLAMIG+ GMLVQELV+ Q ILG
Sbjct:    1 MAASSNMFLGTAATLIASSAAFVTPMA--VRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 4.050e-66
Identity = 99/160 (61.88%), Postives = 124/160 (77.50%), Query Frame = 0
Query:   64 VWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILG 223
            ++DP+G S    P  IKK+REAE+KHGRVAMLA++G++VAE +HP FMGPDYIGPAVDHFQEI+A+FP FW  +  G+AF+EY +I   +    + TG G LK +Y PGDLGFDPL L+P++  AL  M+TKELNNGRLAMIG+AGML QELV+   ILG
Sbjct:   37 IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 6.430e-66
Identity = 100/159 (62.89%), Postives = 124/159 (77.99%), Query Frame = 0
Query:   64 VWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGIL 222
            ++DP+G +   +   IK +REAE+KHGRVAMLA++G+LVAE +HP FMGPDYIGPAVDHFQEI+ARFP FW  +   +A IEY +IT+ + E    TG G L+ EY+PGDLGFDPL L+P +  AL+TMQTKELNNGRLAMIG+AG LVQELV+   IL
Sbjct:   16 IFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 9.670e-64
Identity = 100/160 (62.50%), Postives = 124/160 (77.50%), Query Frame = 0
Query:   64 VWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILG 223
            ++DP+G S    P  IKK+REAE+KHGRVAMLA++G++VAE +HP FMGPDYIGPAVDHFQEI+A+FP FW  +  G+AFIEY +I   +    + TG G LK +Y PGDLGFDPL L+P++  AL  M+TKELNNGRLAMIG+AGML QELV+   ILG
Sbjct:  233 IFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.030e-55
Identity = 109/220 (49.55%), Postives = 138/220 (62.73%), Query Frame = 0
Query:    6 QMFLVAAAAAMATSSAFVQHIAGSISMRSKHAAPSAA--TMTAGSDYVATLPGTPFPDGAVWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGILVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSITQGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNGRLAMIGVAGMLVQELVDSQGILG 223
            QMF+  AA  +A+S+AFV  +A    +RS    PS+    M+AGSDYVATLPG PF DG ++DP+G S    P  IKK+REAE+KHGRVAMLA++G++VAE                            FW  +  G+AFIEY +I   +    + TG G LK +Y PGDLGFDPL L+P++  AL  M+TKELNNGRLAMIG+AGML QELV+   ILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPMA----VRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig898.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI1.350e-8460.73Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI5.640e-8460.09Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI2.380e-8266.12Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI5.220e-8260.27Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI4.790e-8159.55Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI6.570e-7555.61Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI4.050e-6661.88Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI6.430e-6662.89Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE9.670e-6462.50LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5K8D0_9PHAE2.030e-5549.55LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 38..226
e-value: 3.5E-46
score: 159.6
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 5..222
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 55..224
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 53..214
e-value: 1.2E-40
score: 139.7
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 5..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig898contigD-mesarthrocarpus_Contig898:18645..19995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig898.12.1mRNA_D-mesarthrocarpus_Contig898.12.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig898 18069..20069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig898.12.1 ID=prot_D-mesarthrocarpus_Contig898.12.1|Name=mRNA_D-mesarthrocarpus_Contig898.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=227bp
MKTSTQMFLVAAAAAMATSSAFVQHIAGSISMRSKHAAPSAATMTAGSDY
VATLPGTPFPDGAVWDPVGFSTKNDPETIKKFREAEVKHGRVAMLAAVGI
LVAESFHPLFMGPDYIGPAVDHFQEITARFPAFWVAATTGIAFIEYQSIT
QGWGEVDSTTGTGNLKPEYTPGDLGFDPLGLQPENPEALKTMQTKELNNG
RLAMIGVAGMLVQELVDSQGILGHFV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln