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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13812 | PPR_3 | coord: 283..339
e-value: 2.0E-10
score: 40.6 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 258..291
e-value: 7.5E-4
score: 17.5
coord: 328..361
e-value: 2.8E-8
score: 31.4
coord: 223..255
e-value: 8.0E-6
score: 23.7
coord: 293..326
e-value: 1.7E-6
score: 25.8
coord: 153..186
e-value: 4.0E-6
score: 24.6
coord: 187..221
e-value: 1.3E-9
score: 35.6 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF01535 | PPR | coord: 258..278
e-value: 0.31
score: 11.4 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 255..290
score: 10.325603 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 291..325
score: 12.068449 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 326..360
score: 11.476539 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 115..149
score: 9.229472 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 150..184
score: 9.985802 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 185..219
score: 13.504379 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 220..254
score: 10.654441 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 361..395
score: 8.911594 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 181..273
e-value: 4.8E-29
score: 103.0 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 87..180
e-value: 7.8E-16
score: 60.4
coord: 280..402
e-value: 7.3E-31
score: 109.7 |
| IPR033443 | Pentacotripeptide-repeat region of PRORP | PFAM | PF17177 | PPR_long | coord: 83..245
e-value: 2.6E-11
score: 43.3 |
| None | No IPR available | PANTHER | PTHR47942 | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | coord: 88..283
coord: 289..430
coord: 151..321 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_D-mesarthrocarpus_Contig8964.2.1 ID=prot_D-mesarthrocarpus_Contig8964.2.1|Name=mRNA_D-mesarthrocarpus_Contig8964.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=524bp
GFLSLLDIPFPKQKNGHWHSCRSLLPCETLLLHGSRIIDSIGCRYRCRPL
MVNIVRGPVDEEVSGTATATATATATATADQIELVQDLKALGKKRQWRTA
LAKFHRAKEEGTVADNRIYSCIISVVAKSGRWSEAVGLLGEARADGLPAH
VFCFAAAVSACAKGRNWKLALSLLGEMREEGLQPDIVTYGSVVSAMAKAG
KWERALDLLDRMRSEGLEPNAMCYGAAVDACAKGGEWKKAVGLLEEMQLA
GVDPDRMSFNTAIHACGQSGEWEVALALARERMPAVGIRPDIYTFNSVMH
AFATAGEWKRALDLPNEMLSHGVSPDLVSFNTAMGACVKAGEGSHAVSLL
DSMKERGISPDRESFSAAARACALGGDWEQAISLLQTARALGLRPGPRAA
MDAIAACARAGQWRKGTPLVEEMVAAGALKGVAAWEVTLASVLTKRKGDN
ACPSDGGTSNISDVGGALVEGGAVVAGSQGVRPLSPHEEGVGFNAQDRGN
HEGTGVCRCRTNTVAGPCVRSQAG back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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