prot_D-mesarthrocarpus_Contig8872.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig8872.2.1
Unique Nameprot_D-mesarthrocarpus_Contig8872.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length83
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig8872.2.1 vs. uniprot
Match: D7FMI8_ECTSI (NPC1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI8_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.150e-11
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:    2 DDLTGGLGRVLQADVRLDPAYVCEVYDSCKSVAIVGETTAMQSGL 46
            DDLTGG  RVLQ DV +D    C +Y+SCKS+A+VGETTAMQSGL
Sbjct:  197 DDLTGGSSRVLQLDVNVDGDMACRIYESCKSIAVVGETTAMQSGL 241
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig8872.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMI8_ECTSI1.150e-1168.89NPC1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig8872contigD-mesarthrocarpus_Contig8872:4567..4815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig8872.2.1mRNA_D-mesarthrocarpus_Contig8872.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig8872 2841..4881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig8872.2.1 ID=prot_D-mesarthrocarpus_Contig8872.2.1|Name=mRNA_D-mesarthrocarpus_Contig8872.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=83bp
MDDLTGGLGRVLQADVRLDPAYVCEVYDSCKSVAIVGETTAMQSGLASVL
RPVAVLVSCAYARALVVHGLGWRGSVFLSLCL*
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